Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00684 Vaccinium macrocarpon HOM05D005635 ORTHO05D006838 0.0e+00 1092.8 588 100.0
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 1.3e-204 716.8 565 73.5
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 8.7e-156 554.7 618 56.1
Dinv18319 Davidia involucrata HOM05D005635 ORTHO05D006838 4.6e-141 505.8 620 52.6
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 3.4e-128 463.0 614 48.9
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 3.8e-127 459.5 627 48.5
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 2.7e-125 453.4 612 44.6
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 2.7e-125 453.4 612 44.6
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 1.9e-123 447.2 624 44.2
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 1.8e-121 440.7 619 44.7
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 1.5e-120 437.6 614 46.4
Prupe.7G266600 Prunus persica HOM05D005635 ORTHO05D006838 8.5e-119 431.8 623 46.9
Atru.chr4.1471 Acer truncatum HOM05D005635 ORTHO05D006838 1.5e-115 421.0 633 45.2
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 2.0e-115 420.6 600 47.7
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 3.7e-114 416.4 616 40.7
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 4.8e-114 416.0 623 42.9
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 3.4e-112 409.8 656 39.9
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 4.5e-112 409.5 624 42.9
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 1.1e-110 404.8 622 43.9
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 1.1e-110 404.8 620 43.4
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 1.4e-110 404.4 622 42.8
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 1.4e-110 404.4 634 44.8
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 6.1e-109 399.1 622 42.4
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 7.9e-109 398.7 618 40.9
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 7.9e-109 398.7 624 43.4
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 1.1e-107 394.8 623 42.9
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 2.2e-106 390.6 623 40.4
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 2.4e-105 387.1 606 42.4
Solyc03g059180.4 Solanum lycopersicum HOM05D005635 ORTHO05D006838 7.0e-105 385.6 606 42.2
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 4.5e-104 382.9 602 44.7
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 7.7e-104 382.1 654 41.1
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 1.3e-103 381.3 613 41.6
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 6.5e-103 379.0 607 44.6
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 1.1e-102 378.3 449 53.9
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 2.5e-102 377.1 607 44.5
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 5.5e-102 375.9 627 39.4
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 6.1e-101 372.5 607 44.3
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 1.0e-100 371.7 604 39.6
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 1.5e-99 367.9 607 39.5
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 4.4e-99 366.3 618 42.4
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 4.4e-99 366.3 618 43.4
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 8.2e-98 362.1 449 45.7
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 8.2e-98 362.1 375 52.5
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 5.3e-97 359.4 615 41.8
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 2.6e-96 357.1 586 38.9
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 5.0e-95 352.8 608 42.8
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 6.5e-95 352.4 603 36.8
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 2.5e-94 350.5 586 38.6
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 4.2e-94 349.7 615 39.3
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 5.5e-94 349.4 604 36.3
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 9.4e-94 348.6 604 40.4
Cc03_g14460 Coffea canephora HOM05D005635 ORTHO05D006838 1.2e-93 348.2 633 38.1
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 2.1e-93 347.4 618 36.7
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 1.8e-92 344.4 599 36.2
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 1.8e-92 344.4 617 39.1
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 2.3e-92 344.0 594 37.5
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 6.8e-92 342.4 596 37.6
PGR042G2382 Punica granatum HOM05D005635 ORTHO05D006838 2.6e-91 340.5 608 41.1
SalBow7G2884 Salvia bowleyana HOM05D005635 ORTHO05D006838 4.4e-91 339.7 607 38.1
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 1.7e-90 337.8 584 38.5
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 2.2e-90 337.4 606 38.3
Nitab4.5_0000064g0020 Nicotiana tabacum HOM05D005635 ORTHO05D006838 2.2e-90 337.4 599 38.7
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 3.7e-90 336.7 591 41.5
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 3.7e-90 336.7 587 42.9
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 4.8e-90 336.3 455 41.3
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 4.8e-90 336.3 618 40.6
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 8.3e-90 335.5 587 41.2
Oeu017118.1 Olea europaea HOM05D005635 ORTHO05D006838 3.1e-89 333.6 381 54.3
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 1.2e-88 331.6 624 34.6
TPR.G17194 Trifolium pratense HOM05D005635 ORTHO05D006838 2.2e-87 327.4 606 37.6
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 5.0e-87 326.2 599 35.2
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 5.0e-87 326.2 595 39.7
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 6.5e-87 325.9 597 41.2
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 4.2e-86 323.2 461 40.3
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 9.4e-86 322.0 435 41.6
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 1.2e-85 321.6 602 41.4
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 1.8e-84 317.8 634 33.9
HanXRQChr02g0059091 Helianthus annuus HOM05D005635 ORTHO05D006838 4.0e-84 316.6 380 47.6
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 5.2e-84 316.2 465 41.5
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 1.2e-83 315.1 610 36.2
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 1.2e-83 315.1 650 33.4
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 1.5e-83 314.7 463 39.3
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 1.7e-82 311.2 619 34.9
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 2.4e-81 307.4 374 45.2
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 3.1e-81 307.0 618 38.5
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 1.2e-80 305.1 461 42.5
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 2.0e-80 304.3 650 33.2
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 5.9e-80 302.8 463 37.4
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 5.0e-79 299.7 461 37.3
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 4.2e-78 296.6 396 42.7
SalBow1G7464 Salvia bowleyana HOM05D005635 ORTHO05D006838 1.6e-72 278.1 484 36.0
Lsat_1_v5_gn_6_67720 Lactuca sativa HOM05D005635 ORTHO05D006838 7.8e-72 275.8 579 35.9
Nitab4.5_0002913g0010 Nicotiana tabacum HOM05D005635 ORTHO05D006838 5.0e-71 273.1 574 35.2
HPP92_007033 Vanilla planifolia HOM05D005635 ORTHO05D006838 4.3e-70 270.0 396 39.4
Os01g0896500 Oryza sativa ssp. japonica HOM05D005635 ORTHO05D006838 7.3e-70 269.2 375 41.9
HPP92_007065 Vanilla planifolia HOM05D005635 ORTHO05D006838 3.6e-69 266.9 396 38.6
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 3.4e-67 260.4 375 40.8
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 1.9e-65 254.6 578 33.4
ECA233G1690 Erigeron canadensis HOM05D005635 ORTHO05D006838 5.4e-65 253.1 367 42.8
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 4.3e-62 243.4 431 40.4
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 5.4e-57 226.5 451 34.8
CAN.G207.4 Capsicum annuum HOM05D005635 ORTHO05D006838 8.6e-55 219.2 375 34.9
SEGI_21812 Sequoiadendron giganteum HOM05D005635 ORTHO05D006838 3.1e-52 210.7 355 34.9
Pp3c5_10150 Physcomitrium patens HOM05D005635 ORTHO05D006838 3.4e-43 180.6 324 34.0
Mapoly0056s0110 Marchantia polymorpha HOM05D005635 ORTHO05D006838 1.0e-39 169.1 356 30.6
Atru.chr4.1498 Acer truncatum HOM05D005635 ORTHO05D006838 3.0e-39 167.5 175 54.9
AagrBONN_evm.TU.Sc2ySwM_344.4224 Anthoceros agrestis HOM05D005635 ORTHO05D006838 4.9e-34 150.2 342 29.2
CBR_g30747 Chara braunii HOM05D005635 ORTHO05D006838 1.6e-29 135.2 379 26.6
Carub.0005s2649 Capsella rubella HOM05D005635 ORTHO05D006838 2.8e-29 134.4 185 38.4
CSS0016204 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 1.2e-24 119.0 92 69.6
Atru.chr4.1500 Acer truncatum HOM05D005635 ORTHO05D006838 1.1e-22 112.5 284 38.7
Atru.chr4.1499 Acer truncatum HOM05D005635 ORTHO05D006838 3.5e-16 90.9 50 82.0
Potri.014G182410 Populus trichocarpa HOM05D005635 ORTHO05D006838 1.3e-13 82.4 126 38.1
Ca_19887_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 1.8e-12 78.6 96 38.5
Potri.019G098001 Populus trichocarpa HOM05D005635 ORTHO05D006838 2.0e-11 75.1 165 32.7
RcHm_v2.0_Chr6g0284261 Rosa chinensis HOM05D005635 ORTHO05D006838 2.0e-11 75.1 95 45.3
Carub.0005s2650 Capsella rubella HOM05D005635 ORTHO05D006838 2.9e-10 71.2 101 41.6
CARHR151070 Cardamine hirsuta HOM05D005635 ORTHO05D006838 8.4e-10 69.7 169 31.4
Potri.019G098950 Populus trichocarpa HOM05D005635 ORTHO05D006838 1.2e-08 65.9 33 84.8
SEGI_01456 Sequoiadendron giganteum HOM05D006004 ORTHO05D006976 2.5e-06 58.2 312 22.1
PGR044G2256 Punica granatum HOM05D006004 ORTHO05D006976 4.3e-06 57.4 323 22.6
TPR.G2782 Trifolium pratense HOM05D006004 ORTHO05D006976 4.3e-06 57.4 204 27.9
Cc04_g07800 Coffea canephora HOM05D006004 ORTHO05D006976 5.7e-06 57.0 215 23.7
Dinv38608 Davidia involucrata HOM05D006004 ORTHO05D006976 5.7e-06 57.0 320 22.8
Manes.05G116700 Manihot esculenta HOM05D006004 ORTHO05D006976 7.4e-06 56.6 200 25.5
SalBow1G1782 Salvia bowleyana HOM05D006004 ORTHO05D006976 7.4e-06 56.6 345 22.3
Glyma.05G016000 Glycine max HOM05D006004 ORTHO05D006976 9.7e-06 56.2 318 22.6


User provided reference genes

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