Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00683 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 2.6e-91 338.6 155 100.0
Rhsim05G0114900 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.9e-39 165.2 268 39.2
Rhsim01G0083600 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.8e-35 151.4 254 38.2
Rhsim01G0170300 Rhododendron simsii HOM05D000023 ORTHO05D000014 7.1e-33 144.4 155 53.5
Rhsim10G0109700 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.6e-29 133.3 209 40.7
Rhsim07G0024700 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.0e-28 127.5 163 47.9
Rhsim08G0149200 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.3e-25 117.5 225 34.7
Rhsim02G0237200 Rhododendron simsii HOM05D003548 ORTHO05D004066 2.1e-21 106.3 93 61.3
Rhsim04G0142400 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.2e-21 104.8 72 69.4
Rhsim07G0069100 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.9e-17 93.2 63 73.0
CiPaw.05G123500 Carya illinoinensis HOM05D000023 ORTHO05D000014 4.2e-17 92.0 167 35.3
CiPaw.11G064600 Carya illinoinensis HOM05D000023 ORTHO05D000014 2.7e-16 89.4 197 31.5
QL06p041042 Quercus lobata HOM05D000023 ORTHO05D000014 3.5e-16 89.0 244 28.7
CiPaw.07G111600 Carya illinoinensis HOM05D000023 ORTHO05D000014 4.6e-16 88.6 145 37.2
QL09p045098 Quercus lobata HOM05D000023 ORTHO05D000014 7.9e-16 87.8 199 29.1
CiPaw.13G120100 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.8e-15 86.7 200 30.0
Rhsim05G0071000 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.5e-14 83.6 51 74.5
CiPaw.03G191500 Carya illinoinensis HOM05D000023 ORTHO05D000014 4.3e-14 82.0 217 28.1
CiPaw.01G093600 Carya illinoinensis HOM05D000023 ORTHO05D000014 7.4e-14 81.3 217 28.1
CiPaw.07G170200 Carya illinoinensis HOM05D000023 ORTHO05D000014 7.4e-14 81.3 217 28.1
CiPaw.01G084200 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.7e-13 79.0 219 27.9
QL12p001461 Quercus lobata HOM05D000023 ORTHO05D000014 6.3e-13 78.2 57 64.9
QL12p001487 Quercus lobata HOM05D000023 ORTHO05D000014 6.3e-13 78.2 57 64.9
CiPaw.13G061100 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.1e-12 77.4 218 27.1
CiPaw.15G074600 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.8e-12 76.6 207 28.0
CiPaw.14G124200 Carya illinoinensis HOM05D000023 ORTHO05D000014 9.0e-12 74.3 217 27.6
Os09g0499600 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.2e-11 73.9 244 27.0
CiPaw.09G222200 Carya illinoinensis HOM05D000023 ORTHO05D000014 4.5e-11 72.0 207 28.0
CiPaw.05G046600 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.7e-10 70.1 38 71.1
CiPaw.11G112700 Carya illinoinensis HOM05D000023 ORTHO05D000014 2.2e-10 69.7 38 73.7
QL93p1865_0093 Quercus lobata HOM05D000003 ORTHO05D012891 4.2e-09 65.5 77 49.4
QL02p005214 Quercus lobata HOM05D000023 ORTHO05D000014 1.2e-08 63.9 212 27.8
CiPaw.09G159500 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.6e-08 62.4 61 54.1
arahy.Tifrunner.gnm1.ann1.47LY6I Arachis hypogaea HOM05D000023 ORTHO05D000014 7.9e-08 61.2 77 39.0
SEGI_16432 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 1.0e-07 60.8 71 43.7
CiPaw.03G065700 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.0e-07 59.3 66 51.5
CiPaw.05G170000 Carya illinoinensis HOM05D000023 ORTHO05D000014 3.0e-07 59.3 94 38.3
SEGI_00189 Sequoiadendron giganteum HOM05D016641 ORTHO05D018324 3.9e-07 58.9 78 38.5
SEGI_26637 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 6.7e-07 58.2 154 29.9
arahy.Tifrunner.gnm1.ann1.43NKU4 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.5e-06 57.0 140 31.4
MD02G1265900 Malus domestica HOM05D000023 ORTHO05D000014 2.0e-06 56.6 37 51.4
SEGI_39986 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.0e-06 56.6 50 46.0
PSO210G1900 Papaver somniferum HOM05D000023 ORTHO05D000014 3.3e-06 55.8 37 54.1
PSO210G5463 Papaver somniferum HOM05D000023 ORTHO05D000014 3.3e-06 55.8 37 54.1
arahy.Tifrunner.gnm1.ann1.NFL6M1 Arachis hypogaea HOM05D000023 ORTHO05D000014 4.3e-06 55.5 159 25.8
Rhsim01G0183100 Rhododendron simsii HOM05D000023 ORTHO05D000014 4.3e-06 55.5 37 54.1
SEGI_21762 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 4.3e-06 55.5 143 30.1
arahy.Tifrunner.gnm1.ann1.267J95 Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-06 55.1 37 59.5
arahy.Tifrunner.gnm1.ann1.7IR32M Arachis hypogaea HOM05D000023 ORTHO05D000014 5.7e-06 55.1 37 59.5
arahy.Tifrunner.gnm1.ann1.1A1CKU Arachis hypogaea HOM05D000023 ORTHO05D000014 7.4e-06 54.7 37 59.5
arahy.Tifrunner.gnm1.ann1.A7X4FA Arachis hypogaea HOM05D000023 ORTHO05D000014 7.4e-06 54.7 37 59.5
arahy.Tifrunner.gnm1.ann1.BDH6KM Arachis hypogaea HOM05D000023 ORTHO05D000014 7.4e-06 54.7 37 59.5
arahy.Tifrunner.gnm1.ann1.FWM2ZC Arachis hypogaea HOM05D000023 ORTHO05D000014 7.4e-06 54.7 37 59.5
QL06p027029 Quercus lobata HOM05D000023 ORTHO05D000014 7.4e-06 54.7 50 46.0
QL93p2004_0106 Quercus lobata HOM05D000023 ORTHO05D000014 7.4e-06 54.7 50 46.0
arahy.Tifrunner.gnm1.ann1.IQ9CFU Arachis hypogaea HOM05D000023 ORTHO05D000014 9.7e-06 54.3 130 30.8
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.7e-06 54.3 42 47.6
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 9.7e-06 54.3 42 47.6
QL06p051978 Quercus lobata HOM05D000023 ORTHO05D000014 9.7e-06 54.3 50 46.0
Hund12183 Selenicereus undatus HOM05D000023 ORTHO05D000014 9.7e-06 54.3 129 32.6


User provided reference genes

Program Settings