Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00675 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 0.0e+00 1637.1 825 100.0
vmacro12924 Vaccinium macrocarpon HOM05D000826 ORTHO05D001831 9.5e-201 704.5 702 58.0
vmacro22383 Vaccinium macrocarpon HOM05D000826 ORTHO05D017107 1.2e-97 362.1 645 41.2
Actinidia34573 Actinidia chinensis HOM05D001295 ORTHO05D005319 2.0e-57 228.4 178 62.9
Dinv05087 Davidia involucrata HOM05D001295 ORTHO05D005319 9.6e-52 209.5 178 57.9
vmacro07166 Vaccinium macrocarpon HOM05D001675 ORTHO05D001808 8.4e-48 196.4 379 37.5
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 3.5e-46 191.0 177 53.1
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 9.6e-44 183.0 178 53.4
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 1.6e-43 182.2 176 53.4
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 1.6e-43 182.2 177 54.2
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.8e-43 181.4 141 66.0
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 3.7e-43 181.0 141 66.0
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 1.1e-42 179.5 178 52.2
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 2.4e-42 178.3 178 53.4
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 4.0e-42 177.6 184 48.9
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 1.2e-41 176.0 177 53.1
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.5e-41 175.6 198 48.5
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 4.5e-41 174.1 170 54.7
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 4.5e-41 174.1 178 52.2
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 7.6e-41 173.3 184 48.4
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 7.6e-41 173.3 177 50.3
Lj3C135G1 Lonicera japonica HOM05D001295 ORTHO05D005319 7.6e-41 173.3 184 48.4
Haze_01445 Corylus avellana HOM05D001295 ORTHO05D005319 4.9e-40 170.6 170 51.8
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 1.4e-39 169.1 192 49.0
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 1.9e-39 168.7 172 50.6
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 2.4e-39 168.3 179 52.0
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 4.2e-39 167.5 168 50.6
Aqoxy5G00377 Aquilegia oxysepala HOM05D001295 ORTHO05D005319 9.3e-39 166.4 178 50.0
SalBow5G4879 Salvia bowleyana HOM05D001295 ORTHO05D005319 9.3e-39 166.4 191 49.2
QL10p051666 Quercus lobata HOM05D001295 ORTHO05D005319 2.7e-38 164.9 172 47.1
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 1.0e-37 162.9 172 48.3
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.3e-37 162.5 183 49.7
Thecc.04G173200 Theobroma cacao HOM05D001295 ORTHO05D005319 1.3e-37 162.5 184 46.2
MSTRG.4291 Avicennia marina HOM05D001295 ORTHO05D005319 1.8e-37 162.2 177 50.8
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 3.9e-37 161.0 168 49.4
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 3.9e-37 161.0 172 47.1
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 6.7e-37 160.2 183 45.9
PSO017G5265 Papaver somniferum HOM05D001295 ORTHO05D005319 1.1e-36 159.5 166 49.4
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 1.5e-36 159.1 177 45.2
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 2.5e-36 158.3 175 50.3
Sabra07G0107500 Salix brachista HOM05D001295 ORTHO05D005319 2.5e-36 158.3 177 47.5
Ciclev10021418m.g Citrus clementina HOM05D001295 ORTHO05D005319 4.3e-36 157.5 167 50.9
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 4.3e-36 157.5 166 48.2
Gohir.D08G098300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 5.6e-36 157.1 180 47.8
Gorai.004G105900 Gossypium raimondii HOM05D001295 ORTHO05D005319 1.3e-35 156.0 180 47.2
Sabra07G0119300 Salix brachista HOM05D001295 ORTHO05D005319 2.1e-35 155.2 177 46.9
TWI15G0408 Tripterygium wilfordii HOM05D001295 ORTHO05D005319 2.1e-35 155.2 186 47.3
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 2.8e-35 154.8 165 50.3
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 3.7e-35 154.5 168 50.6
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 6.2e-35 153.7 166 46.4
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 1.1e-34 152.9 166 47.6
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 1.4e-34 152.5 163 47.2
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 4.0e-34 151.0 169 44.4
Sabra07G0119200 Salix brachista HOM05D001295 ORTHO05D005319 2.6e-33 148.3 167 46.1
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 7.6e-33 146.7 170 44.7
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 1.0e-32 146.4 172 47.7
Migut.G01331 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.7e-32 145.6 168 48.8
Ciclev10021666m.g Citrus clementina HOM05D001295 ORTHO05D005319 2.2e-32 145.2 177 45.2
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 1.4e-31 142.5 85 80.0
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 1.9e-31 142.1 166 47.0
Eucgr.H00340 Eucalyptus grandis HOM05D001295 ORTHO05D005319 1.9e-31 142.1 179 44.1
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 1.9e-31 142.1 174 43.7
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 1.9e-31 142.1 179 42.5
COL.COLO4_21796 Corchorus olitorius HOM05D001295 ORTHO05D005319 4.2e-31 141.0 177 41.8
Phvul.005G154600 Phaseolus vulgaris HOM05D001295 ORTHO05D005319 5.5e-31 140.6 172 45.9
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 1.2e-30 139.4 182 42.3
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.6e-30 139.0 169 41.4
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 2.1e-30 138.7 174 46.6
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 4.6e-30 137.5 205 36.1
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 4.6e-30 137.5 183 42.6
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 1.3e-29 136.0 256 36.7
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 1.8e-29 135.6 169 39.6
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 5.1e-29 134.0 166 44.0
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 5.1e-29 134.0 171 43.9
Manes.04G047700 Manihot esculenta HOM05D001295 ORTHO05D005319 5.1e-29 134.0 177 40.7
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 1.1e-28 132.9 180 40.0
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 1.5e-28 132.5 101 59.4
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 1.9e-28 132.1 172 42.4
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 3.3e-28 131.3 169 40.8
Gohir.A08G092500 Gossypium hirsutum HOM05D001295 ORTHO05D005319 4.3e-28 131.0 182 42.9
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 5.7e-28 130.6 166 42.8
ClCG07G011710 Citrullus lanatus HOM05D001295 ORTHO05D005319 7.4e-28 130.2 177 46.9
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 6.3e-27 127.1 171 42.1
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 3.1e-26 124.8 168 43.5
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 3.1e-26 124.8 167 42.5
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 4.1e-26 124.4 172 40.1
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 1.2e-25 122.9 176 38.6
FvH4_2g24830 Fragaria vesca HOM05D001295 ORTHO05D005319 1.5e-25 122.5 168 40.5
FAN24G0827 Fragaria x ananassa HOM05D001295 ORTHO05D005319 1.5e-25 122.5 168 40.5
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 1.5e-25 122.5 172 40.7
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 4.5e-25 120.9 168 39.3
CARHR138550 Cardamine hirsuta HOM05D001295 ORTHO05D005319 5.9e-25 120.6 168 37.5
CsaV3_4G002500 Cucumis sativus L. HOM05D001295 ORTHO05D005319 3.8e-24 117.9 180 41.7
AT2G43465 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 5.0e-24 117.5 169 38.5
C01p44730 Brassica napus HOM05D001295 ORTHO05D005319 6.5e-24 117.1 178 39.9
Lalb_Chr14g0372571 Lupinus albus HOM05D001295 ORTHO05D005319 6.5e-24 117.1 166 42.2
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 8.5e-24 116.7 168 37.5
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 8.5e-24 116.7 179 40.2
FAN27G1301 Fragaria x ananassa HOM05D001295 ORTHO05D005319 8.5e-24 116.7 168 38.7
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 1.1e-23 116.3 179 40.8
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 1.1e-23 116.3 168 39.3
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 1.1e-23 116.3 168 39.3
Sed0000422 Sechium edule HOM05D001295 ORTHO05D005319 1.1e-23 116.3 175 40.0
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 1.9e-23 115.5 140 43.6
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 1.9e-23 115.5 168 39.9
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 2.5e-23 115.2 166 38.0
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 4.2e-23 114.4 166 38.0
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 2.1e-22 112.1 168 38.1
RcHm_v2.0_Chr6g0292651 Rosa chinensis HOM05D001295 ORTHO05D005319 6.1e-22 110.5 168 39.3
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 2.3e-21 108.6 163 39.3
Lalb_Chr22g0352051 Lupinus albus HOM05D001295 ORTHO05D005319 2.3e-21 108.6 169 36.1
Thhalv10021391m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 1.5e-20 105.9 178 36.0
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.9e-20 105.5 168 36.3
AL3G12950 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 1.7e-19 102.4 181 32.6
FAN15G1214 Fragaria x ananassa HOM05D001295 ORTHO05D005319 3.7e-19 101.3 173 36.4
A05p43870 Brassica napus HOM05D001295 ORTHO05D005319 6.3e-19 100.5 181 35.9
BraA05t23124Z Brassica rapa HOM05D001295 ORTHO05D005319 1.8e-18 99.0 181 35.9
AT3G03320 Arabidopsis thaliana HOM05D001295 ORTHO05D005319 2.4e-18 98.6 181 30.9
CARHR077360 Cardamine hirsuta HOM05D001295 ORTHO05D005319 3.1e-18 98.2 182 33.0
THA.LOC104820845 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 3.1e-18 98.2 181 36.5
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 4.1e-18 97.8 145 39.3
C05p63460 Brassica napus HOM05D001295 ORTHO05D005319 6.9e-18 97.1 185 36.2
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.2e-17 96.3 63 69.8
Sp3g02350 Schrenkiella parvula HOM05D001295 ORTHO05D005319 5.9e-17 94.0 181 32.0
BcaC05g30303 Brassica carinata HOM05D001295 ORTHO05D005319 7.7e-17 93.6 182 36.8
BolC5t35010H Brassica oleracea HOM05D001295 ORTHO05D005319 7.7e-17 93.6 185 35.1
ECA240G1882 Erigeron canadensis HOM05D001295 ORTHO05D005319 7.7e-17 93.6 66 60.6
Carub.0003s0249 Capsella rubella HOM05D001295 ORTHO05D005319 1.3e-16 92.8 181 33.1
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 3.2e-15 88.2 189 30.2
Aa31LG5G13780 Aethionema arabicum HOM05D001295 ORTHO05D005319 6.1e-14 84.0 201 28.9
Pp3c13_1370 Physcomitrium patens HOM05D001295 ORTHO05D005319 6.1e-14 84.0 180 31.1
vmacro05249 Vaccinium macrocarpon HOM05D002788 ORTHO05D003199 7.9e-14 83.6 234 35.5
Zm00001eb064040 Zea mays HOM05D001295 ORTHO05D005319 7.9e-14 83.6 180 35.0
Sabra17G0000500 Salix brachista HOM05D001295 ORTHO05D005319 6.7e-13 80.5 82 50.0
Sabra17G0001500 Salix brachista HOM05D001295 ORTHO05D005319 6.7e-13 80.5 77 51.9
Rhsim06G0114700 Rhododendron simsii HOM05D010712 ORTHO05D017107 9.7e-12 76.6 138 36.2
Sabra17G0001700 Salix brachista HOM05D001295 ORTHO05D005319 1.4e-10 72.8 131 38.9
CSS0025012 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.8e-10 72.4 166 34.9
A09p42860 Brassica napus HOM05D001295 ORTHO05D005319 3.1e-10 71.6 121 35.5
Rhsim06G0088600 Rhododendron simsii HOM05D003552 ORTHO05D006018 4.1e-10 71.2 83 38.6
BolC2t06464H Brassica oleracea HOM05D001295 ORTHO05D005319 1.2e-09 69.7 171 30.4
CSS0028813 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.2e-09 69.7 94 38.3
CSS0035894 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.0e-08 66.6 94 35.1
CSS0014312 Camellia sinensis var. sinensis HOM05D006495 ORTHO05D009652 1.7e-08 65.9 101 38.6
CSS0043543 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 6.5e-08 63.9 146 31.5
Sabra17G0015200 Salix brachista HOM05D001295 ORTHO05D005319 6.5e-08 63.9 107 35.5
CSS0028140 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 1.1e-07 63.2 95 35.8
CSS0010674 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.2e-07 61.6 107 33.6
CSS0047459 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.2e-07 61.2 94 36.2
CSS0024642 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 5.5e-07 60.8 103 35.9
CSS0044977 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 7.2e-07 60.5 103 35.0
CSS0000322 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 2.7e-06 58.5 94 34.0
CSS0044262 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 3.6e-06 58.2 91 37.4
CSS0043284 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 4.7e-06 57.8 108 34.3
CSS0014446 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 6.1e-06 57.4 94 34.0
CSS0035098 Camellia sinensis var. sinensis HOM05D007066 ORTHO05D009013 6.1e-06 57.4 105 32.4
SEGI_20516 Sequoiadendron giganteum HOM05D001295 ORTHO05D005319 8.0e-06 57.0 47 51.1


User provided reference genes

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