Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 8.2e-180 633.6 329 100.0
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.6e-127 459.9 328 75.6
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.5e-125 453.4 331 72.5
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 1.3e-124 450.3 328 73.8
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 7.1e-123 444.5 331 71.6
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 1.5e-117 426.8 323 69.7
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 1.2e-111 407.1 344 64.2
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 1.5e-109 400.2 332 65.4
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 4.4e-109 398.7 356 63.8
Rhsim08G0109800 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-108 396.4 335 68.1
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 7.1e-107 391.3 331 65.0
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 9.3e-107 391.0 336 66.4
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 9.3e-107 391.0 336 67.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 3.5e-106 389.0 348 63.8
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 1.3e-105 387.1 371 60.4
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 3.9e-105 385.6 331 65.0
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 8.7e-105 384.4 328 63.7
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 8.7e-105 384.4 322 65.2
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 1.9e-104 383.3 326 66.9
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 8.1e-103 377.9 332 62.3
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 1.5e-101 373.6 326 62.9
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 5.8e-101 371.7 336 60.7
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 5.8e-101 371.7 344 61.0
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 7.6e-101 371.3 332 62.7
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 9.9e-101 370.9 338 61.5
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 2.9e-100 369.4 384 57.3
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 4.2e-99 365.5 438 50.0
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 7.1e-99 364.8 341 64.2
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 1.6e-98 363.6 336 61.6
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 2.1e-98 363.2 345 59.7
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 2.7e-98 362.8 307 70.4
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 3.5e-98 362.5 340 60.9
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 1.8e-97 360.1 328 60.1
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 1.5e-96 357.1 332 59.3
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 1.5e-96 357.1 331 58.3
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 2.5e-96 356.3 450 49.3
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 3.3e-96 355.9 436 49.3
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 1.3e-95 354.0 373 53.6
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 1.3e-95 354.0 377 56.0
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 3.7e-95 352.4 446 48.9
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 6.2e-95 351.7 393 52.2
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 2.4e-94 349.7 438 49.1
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.2e-93 347.4 426 48.1
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 2.6e-93 346.3 435 47.6
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 5.8e-93 345.1 431 49.4
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 9.9e-93 344.4 435 47.4
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 9.9e-93 344.4 415 50.4
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 1.7e-92 343.6 380 53.9
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 3.8e-92 342.4 459 47.1
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 2.4e-91 339.7 423 48.7
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 1.6e-90 337.0 415 48.0
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 3.5e-90 335.9 466 45.7
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 6.7e-89 331.6 343 55.7
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.1e-88 330.9 447 46.5
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 2.5e-88 329.7 397 48.6
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 2.5e-88 329.7 410 50.5
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 9.6e-88 327.8 467 45.4
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 2.1e-87 326.6 445 45.8
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 4.8e-87 325.5 431 47.6
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 8.2e-87 324.7 287 63.1
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 2.4e-86 323.2 428 47.4
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 4.0e-86 322.4 313 59.7
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 4.0e-86 322.4 480 44.4
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 3.4e-85 319.3 329 56.2
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 3.4e-85 319.3 481 44.5
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 1.1e-83 314.3 264 65.2
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 1.1e-83 314.3 326 54.3
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 1.1e-83 314.3 397 48.6
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 1.4e-83 313.9 504 40.9
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 2.5e-83 313.2 466 44.0
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 2.5e-83 313.2 480 44.8
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 2.7e-82 309.7 499 42.9
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 4.6e-82 308.9 474 43.2
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 4.6e-82 308.9 430 45.6
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 1.0e-81 307.8 484 42.6
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.9e-81 305.8 474 43.0
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 6.7e-81 305.1 475 42.5
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 1.1e-80 304.3 360 53.3
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.5e-80 303.1 287 59.6
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 3.3e-80 302.8 460 41.3
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 4.3e-80 302.4 289 58.5
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 4.3e-80 302.4 496 40.9
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 5.7e-80 302.0 455 42.6
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 1.8e-78 297.0 352 50.0
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 1.8e-78 297.0 352 50.0
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.0e-77 293.5 407 48.2
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 2.6e-77 293.1 400 46.5
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 2.2e-76 290.0 383 47.8
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 2.2e-76 290.0 496 40.3
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 6.5e-76 288.5 401 45.9
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 1.4e-73 280.8 318 50.9
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 1.8e-73 280.4 385 47.3
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 5.1e-73 278.9 373 47.2
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 2.8e-71 273.1 384 46.9
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 2.4e-70 270.0 421 42.3
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 2.4e-70 270.0 481 41.0
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 3.1e-70 269.6 429 42.2
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 5.3e-70 268.9 426 41.3
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 9.1e-70 268.1 427 41.0
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 1.2e-69 267.7 309 49.8
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 1.2e-69 267.7 409 44.3
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 1.5e-69 267.3 424 41.7
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 2.6e-69 266.5 393 45.8
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.3e-68 264.2 379 46.4
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 2.5e-67 260.0 408 43.9
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 2.1e-66 256.9 380 43.7
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.6e-66 256.1 479 37.2
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 3.6e-66 256.1 479 37.2
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 9.7e-64 248.1 440 39.8
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 1.3e-63 247.7 306 48.0
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 1.7e-63 247.3 472 36.0
Manes.02G028100 Manihot esculenta HOM05D005805 ORTHO05D007226 6.3e-63 245.4 168 74.4
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 1.8e-62 243.8 563 32.5
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 9.1e-62 241.5 423 41.1
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 5.9e-61 238.8 560 33.8
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 3.2e-59 233.0 454 36.8
COL.COLO4_05276 Corchorus olitorius HOM05D005805 ORTHO05D007226 3.0e-57 226.5 138 79.0
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 8.2e-55 218.4 313 44.4
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 1.4e-54 217.6 310 44.2
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 7.0e-54 215.3 332 41.9
TAR374G1484 Trochodendron aralioides HOM05D005805 ORTHO05D007226 1.2e-50 204.5 149 71.1
Gohir.D08G196900 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.4e-49 201.1 138 73.9
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 5.2e-41 172.6 203 51.7
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 6.8e-41 172.2 326 39.3
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 6.6e-36 155.6 423 34.3
BolC2t10164H Brassica oleracea HOM05D005805 ORTHO05D007226 9.5e-35 151.8 109 69.7
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 7.3e-27 125.6 362 28.7
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 9.8e-24 115.2 126 52.4
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 1.3e-23 114.8 74 74.3
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 7.8e-21 105.5 107 53.3
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 1.5e-16 91.3 326 30.4
SGA_v2.0_scaffold60G21020 Striga asiatica HOM05D011763 ORTHO05D014257 1.4e-14 84.7 151 35.8
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 2.1e-13 80.9 135 38.5
PRCOL_00001099 Prasinoderma coloniale HOM05D005805 ORTHO05D007226 7.1e-06 55.8 136 33.8


User provided reference genes

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