Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00622 Vaccinium macrocarpon HOM05D008235 ORTHO05D009358 7.7e-283 976.5 489 100.0
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 5.0e-165 585.1 568 60.0
RhsimUnG0195000 Rhododendron simsii HOM05D008235 ORTHO05D009358 5.0e-165 585.1 568 60.0
Actinidia34601 Actinidia chinensis HOM05D008235 ORTHO05D009358 1.2e-97 361.3 510 45.7
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 1.5e-97 360.9 512 47.9
Actinidia35979 Actinidia chinensis HOM05D008235 ORTHO05D009358 1.3e-96 357.8 516 45.2
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 1.1e-84 318.2 392 51.0
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 1.9e-47 194.5 358 37.7
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 1.0e-40 172.2 477 31.7
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 6.1e-38 162.9 482 31.1
MD04G1040900 Malus domestica HOM05D008235 ORTHO05D009358 3.3e-36 157.1 497 29.6
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 7.7e-33 146.0 473 29.4
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 2.2e-32 144.4 519 30.1
TAR636G0036 Trochodendron aralioides HOM05D008235 ORTHO05D009358 4.1e-26 123.6 399 30.1
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 5.4e-26 123.2 428 28.5
Nn1g09629 Nelumbo nucifera HOM05D008235 ORTHO05D009358 2.2e-24 117.9 479 29.4
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 6.5e-24 116.3 430 28.8
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 1.5e-23 115.2 471 27.6
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 1.9e-23 114.8 468 28.0
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 3.2e-23 114.0 313 30.7
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 9.5e-23 112.5 476 29.0
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 1.2e-22 112.1 503 26.4
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 4.7e-22 110.2 469 27.1
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 1.4e-21 108.6 306 29.4
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.8e-21 108.2 443 29.1
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 8.8e-21 105.9 301 31.6
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 2.6e-20 104.4 463 27.6
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 5.7e-20 103.2 346 28.0
Gohir.D02G114100 Gossypium hirsutum HOM05D008235 ORTHO05D009358 6.3e-19 99.8 461 28.2
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 6.3e-19 99.8 446 25.8
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 1.2e-17 95.5 319 28.2
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 1.2e-17 95.5 305 30.5
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 5.9e-17 93.2 444 26.1
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 1.3e-16 92.0 282 29.4
Lalb_Chr22g0352131 Lupinus albus HOM05D008235 ORTHO05D009358 3.8e-16 90.5 461 26.9
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 5.0e-16 90.1 356 28.4
CsaV3_4G003430 Cucumis sativus L. HOM05D008235 ORTHO05D009358 8.6e-16 89.4 318 28.9
Sed0015774 Sechium edule HOM05D008235 ORTHO05D009358 8.6e-16 89.4 296 29.7
Glyma.13G344300 Glycine max HOM05D008235 ORTHO05D009358 2.5e-15 87.8 265 32.1
MELO3C017713.2 Cucumis melo HOM05D008235 ORTHO05D009358 4.0e-13 80.5 453 26.9
Cc03_g12910 Coffea canephora HOM05D008235 ORTHO05D009358 5.2e-13 80.1 255 29.0
CAN.G112.20 Capsicum annuum HOM05D014650 ORTHO05D022197 2.6e-12 77.8 126 41.3
Oeu053824.1 Olea europaea HOM05D008235 ORTHO05D009358 5.7e-12 76.6 467 24.8
Aqoxy2G04121 Aquilegia oxysepala HOM05D008235 ORTHO05D009358 7.5e-12 76.3 111 43.2
Phvul.011G054200 Phaseolus vulgaris HOM05D008235 ORTHO05D009358 9.8e-12 75.9 424 26.4
Glyma.12G052200 Glycine max HOM05D008235 ORTHO05D009358 2.2e-11 74.7 426 24.2
Lj3g0014084 Lotus japonicus HOM05D008235 ORTHO05D009358 2.2e-11 74.7 455 25.5
Peaxi162Scf01052g00325 Petunia axillaris HOM05D014650 ORTHO05D009358 2.2e-11 74.7 93 46.2
Nitab4.5_0011467g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 2.9e-11 74.3 160 35.0
Gohir.A03G088800 Gossypium hirsutum HOM05D008235 ORTHO05D009358 6.4e-11 73.2 402 27.9
Ca_20789_v3 Cicer arietinum L. HOM05D008235 ORTHO05D009358 1.1e-10 72.4 442 25.1
VMungo1127G1046 Vigna mungo HOM05D008235 ORTHO05D009358 1.1e-10 72.4 428 25.7
PSO017G5357 Papaver somniferum HOM05D066249 ORTHO05D009358 5.4e-10 70.1 116 39.7
PSO675G1581 Papaver somniferum HOM05D066249 ORTHO05D009358 7.0e-10 69.7 116 37.1
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 9.2e-10 69.3 291 24.1
Solyc05g050740.3 Solanum lycopersicum HOM05D014650 ORTHO05D009358 1.2e-09 68.9 88 44.3
Nitab4.5_0002598g0040 Nicotiana tabacum HOM05D014650 ORTHO05D009358 1.6e-09 68.6 86 45.3
DCAR_023937 Daucus carota HOM05D008235 ORTHO05D009358 2.7e-09 67.8 72 48.6
Glyma.11G127600 Glycine max HOM05D008235 ORTHO05D009358 2.7e-09 67.8 425 24.7
arahy.Tifrunner.gnm1.ann1.V6VI7P Arachis hypogaea HOM05D008235 ORTHO05D009358 3.5e-09 67.4 435 25.5
Sopen05g029150 Solanum pennellii HOM05D014650 ORTHO05D022197 1.7e-08 65.1 88 43.2
arahy.Tifrunner.gnm1.ann1.TK6P88 Arachis hypogaea HOM05D008235 ORTHO05D009358 6.6e-08 63.2 446 24.4
Hund03161 Selenicereus undatus HOM05D019141 ORTHO05D009358 1.1e-07 62.4 327 26.6
Lsat_1_v5_gn_3_115581 Lactuca sativa HOM05D040109 ORTHO05D009358 1.9e-07 61.6 66 43.9
Cpa.g.sc9.283 Carica papaya HOM05D008235 ORTHO05D009358 1.2e-06 58.9 121 28.9
Medtr4g067260 Medicago truncatula HOM05D008235 ORTHO05D009358 2.1e-06 58.2 448 26.1
Psat7g208600 Pisum sativum HOM05D008235 ORTHO05D009358 2.1e-06 58.2 167 30.5
HanXRQChr03g0091101 Helianthus annuus HOM05D040109 ORTHO05D009358 6.2e-06 56.6 70 41.4


User provided reference genes

Program Settings