Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 4.7e-205 717.6 359 100.0
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 9.8e-110 401.0 342 64.0
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 2.7e-99 366.3 337 58.8
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 2.7e-99 366.3 340 59.7
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.3e-97 358.2 343 56.6
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 1.6e-96 357.1 321 59.2
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 4.0e-95 352.4 339 56.9
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.5e-94 350.5 316 57.6
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 5.8e-94 348.6 356 53.7
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.8e-94 348.6 316 57.3
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 1.7e-93 347.1 345 54.2
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 2.9e-93 346.3 330 56.1
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 4.9e-93 345.5 349 54.2
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 6.4e-93 345.1 344 54.9
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 8.3e-93 344.7 311 57.6
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.1e-92 344.4 342 54.4
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 2.4e-92 343.2 356 53.4
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.2e-91 340.9 344 54.9
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.6e-91 340.5 327 55.4
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 2.0e-91 340.1 311 56.6
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 3.5e-91 339.3 330 55.5
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 4.6e-91 339.0 313 56.2
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.3e-90 336.7 345 54.5
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 3.0e-90 336.3 324 54.0
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 3.9e-90 335.9 354 52.3
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 3.9e-90 335.9 346 53.5
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 3.9e-90 335.9 313 58.8
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 1.5e-89 334.0 335 54.0
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 1.5e-89 334.0 330 53.3
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 2.5e-89 333.2 358 52.0
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 2.5e-89 333.2 343 51.9
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 9.5e-89 331.3 339 53.7
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 2.1e-88 330.1 356 50.6
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 2.1e-88 330.1 356 50.6
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 2.1e-88 330.1 347 51.3
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 3.6e-88 329.3 348 49.7
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 6.2e-88 328.6 341 52.5
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 1.8e-87 327.0 332 52.7
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 1.8e-87 327.0 330 51.8
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 2.3e-87 326.6 348 50.9
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 3.1e-87 326.2 348 50.9
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 4.0e-87 325.9 343 51.6
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 6.8e-87 325.1 348 50.9
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 6.8e-87 325.1 339 52.2
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 8.9e-87 324.7 356 49.7
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 1.2e-86 324.3 307 55.0
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 2.0e-86 323.6 353 49.9
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 3.4e-86 322.8 343 52.2
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 4.4e-86 322.4 343 50.4
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 9.8e-86 321.2 320 52.5
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 9.8e-86 321.2 326 53.7
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 1.3e-85 320.9 312 52.6
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 1.7e-85 320.5 344 51.5
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 1.7e-85 320.5 339 50.7
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 3.7e-85 319.3 336 50.6
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 6.4e-85 318.5 336 50.3
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 1.1e-84 317.8 331 49.8
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 1.1e-84 317.8 355 48.2
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 3.2e-84 316.2 328 52.7
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 4.1e-84 315.8 338 49.1
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 4.1e-84 315.8 313 53.0
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 5.4e-84 315.5 337 49.9
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 5.4e-84 315.5 332 50.3
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 7.0e-84 315.1 337 49.9
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 7.0e-84 315.1 324 51.9
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 7.0e-84 315.1 339 50.7
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 7.0e-84 315.1 324 51.5
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 9.2e-84 314.7 311 51.1
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 9.2e-84 314.7 339 51.0
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 1.2e-83 314.3 335 49.6
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 1.6e-83 313.9 335 49.6
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 1.6e-83 313.9 325 51.4
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 2.7e-83 313.2 304 53.9
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 3.5e-83 312.8 311 50.5
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 6.0e-83 312.0 311 50.8
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 6.0e-83 312.0 327 51.7
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 7.8e-83 311.6 335 49.3
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.0e-82 311.2 311 50.8
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.0e-82 311.2 331 49.5
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 1.3e-82 310.8 329 51.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 1.3e-82 310.8 337 50.1
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 1.3e-82 310.8 320 52.2
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 2.3e-82 310.1 334 48.5
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 2.3e-82 310.1 334 48.5
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 2.3e-82 310.1 335 50.1
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 3.0e-82 309.7 343 49.6
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 3.0e-82 309.7 299 53.5
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 5.1e-82 308.9 371 47.7
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 2.5e-81 306.6 320 50.6
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 3.3e-81 306.2 329 50.5
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 4.3e-81 305.8 355 48.5
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 4.3e-81 305.8 330 50.3
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.4e-79 300.8 303 53.8
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 1.8e-79 300.4 312 51.0
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 2.9e-77 293.1 359 46.0
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 4.9e-77 292.4 304 51.3
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 1.1e-73 281.2 307 47.9
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 5.8e-70 268.9 318 48.7
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 7.8e-67 258.5 279 51.6
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 2.3e-66 256.9 255 53.3
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 3.9e-66 256.1 291 49.8
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 2.5e-65 253.4 296 45.9
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 7.1e-60 235.3 328 43.9
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 9.6e-57 224.9 305 41.3
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 2.0e-54 217.2 139 73.4
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 2.6e-54 216.9 326 40.2
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 1.8e-50 204.1 307 38.4
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 3.2e-44 183.3 99 81.8
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 9.3e-44 181.8 117 80.3
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.0e-42 178.3 314 38.2
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 6.7e-34 149.1 118 65.3
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 6.7e-34 149.1 303 32.7
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.5e-33 147.9 94 75.5
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.5e-33 147.9 94 75.5
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 1.6e-32 144.4 97 78.4
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 2.8e-32 143.7 282 35.5
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 3.7e-32 143.3 99 67.7
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 1.8e-31 141.0 255 36.5
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 7.7e-30 135.6 101 71.3
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.5e-29 132.1 301 30.9
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 5.1e-26 122.9 152 42.1
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 2.5e-25 120.6 85 69.4
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 4.1e-23 113.2 82 68.3
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 3.4e-22 110.2 62 79.0
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 1.7e-21 107.8 105 57.1
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 5.7e-17 92.8 98 50.0
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 5.7e-17 92.8 98 50.0
AUR62035886 Chenopodium quinoa HOM05D006155 ORTHO05D007529 1.1e-15 88.6 55 72.7
SGA_v2.0_scaffold31G12618 Striga asiatica HOM05D006155 ORTHO05D007529 1.8e-15 87.8 54 70.4
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 2.6e-14 84.0 70 61.4
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 9.4e-12 75.5 156 30.8
C09p23060 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-10 71.2 64 57.8
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 1.6e-06 58.2 108 31.5


User provided reference genes

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