Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 2.9e-171 605.1 310 100.0
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 1.4e-104 383.6 382 58.6
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.1e-88 330.9 319 57.4
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 2.6e-87 326.2 231 67.5
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 4.2e-85 318.9 231 66.2
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 5.5e-85 318.5 231 64.9
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 7.2e-85 318.2 232 65.9
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 7.2e-85 318.2 225 64.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.6e-84 317.0 230 65.7
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.6e-84 315.8 266 57.9
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 1.0e-83 314.3 232 65.1
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 5.7e-82 308.5 246 60.6
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 3.7e-81 305.8 232 62.9
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 3.1e-80 302.8 327 51.7
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 5.3e-80 302.0 243 60.1
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 5.3e-80 302.0 244 59.8
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 9.1e-80 301.2 235 61.3
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 2.9e-78 296.2 245 56.3
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 5.0e-78 295.4 231 62.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 7.2e-77 291.6 237 59.9
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.2e-76 290.8 244 57.8
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 5.2e-75 285.4 230 60.9
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.2e-74 284.3 243 57.6
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.6e-74 283.1 227 59.0
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.7e-73 280.4 242 57.0
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.7e-73 279.3 250 56.4
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 4.1e-72 275.8 254 54.7
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.2e-71 274.2 245 55.1
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.6e-71 273.9 234 57.7
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.0e-70 271.2 231 55.4
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 6.5e-70 268.5 231 57.1
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 8.5e-70 268.1 252 53.2
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 2.5e-69 266.5 234 53.8
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 4.2e-69 265.8 254 50.8
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.8e-67 260.4 194 64.9
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.8e-67 260.4 240 52.9
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 2.3e-67 260.0 253 49.8
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 2.6e-66 256.5 233 52.8
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 7.5e-66 255.0 224 54.5
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 7.7e-63 245.0 231 50.2
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-62 244.6 218 53.2
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.3e-62 243.4 236 54.2
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 2.5e-61 240.0 224 51.3
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 2.8e-60 236.5 227 50.2
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.8e-59 233.8 211 55.5
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 6.8e-59 231.9 281 43.8
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 6.6e-54 215.3 214 49.5
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 2.1e-52 210.3 158 58.2
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 6.1e-52 208.8 105 82.9
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 6.8e-51 205.3 107 77.6
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 1.3e-49 201.1 108 78.7
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 6.4e-49 198.7 106 77.4
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 4.6e-47 192.6 103 75.7
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.7e-46 190.7 251 39.4
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 3.9e-46 189.5 107 74.8
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 2.5e-45 186.8 107 72.9
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 5.6e-45 185.7 106 71.7
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 4.7e-44 182.6 106 68.9
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 4.7e-44 182.6 106 68.9
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.4e-43 181.0 107 71.0
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 3.4e-42 176.4 191 47.1
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 4.4e-42 176.0 118 63.6
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.8e-42 175.6 165 55.2
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 1.3e-41 174.5 98 76.5
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.3e-41 174.5 234 40.6
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.9e-40 170.6 98 74.5
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 9.2e-40 168.3 180 48.9
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 9.2e-40 168.3 148 58.8
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 4.6e-39 166.0 86 81.4
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.1e-37 161.4 108 59.3
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.6e-34 150.2 183 43.2
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.9e-29 134.0 236 34.3
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 6.2e-28 129.0 225 34.7
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.4e-27 127.1 191 35.1
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 5.8e-26 122.5 113 56.6
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 2.2e-25 120.6 223 31.4
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.4e-24 117.9 73 65.8
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 9.2e-24 115.2 122 46.7
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 2.7e-23 113.6 120 50.8
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.8e-19 100.9 218 31.2
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.2e-18 98.2 132 43.2
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 4.6e-15 86.3 206 30.1
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.9e-14 83.2 207 29.0
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 2.1e-12 77.4 82 51.2
MBI10_g16797_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 2.1e-12 77.4 87 52.9
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 3.6e-12 76.6 47 78.7
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 4.8e-12 76.3 114 37.7
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 1.1e-11 75.1 56 62.5
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 6.9e-11 72.4 55 61.8
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 1.3e-09 68.2 52 61.5
Oeu024843.1 Olea europaea HOM05D007543 ORTHO05D009555 2.9e-09 67.0 48 60.4
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 8.4e-09 65.5 65 50.8
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 1.1e-08 65.1 52 59.6
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 4.2e-08 63.2 69 50.7
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 7.9e-07 58.9 254 23.2
FAN12G3210 Fragaria x ananassa HOM05D007543 ORTHO05D009555 7.9e-07 58.9 40 62.5
HPP92_022683 Vanilla planifolia HOM05D007543 ORTHO05D009555 7.9e-07 58.9 89 40.4
unitig_0.g2249 Utricularia gibba HOM05D007543 ORTHO05D009555 1.0e-06 58.5 55 50.9


User provided reference genes

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