Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 3.9e-60 234.6 116 100.0
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 3.0e-36 155.2 119 69.7
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 5.1e-36 154.5 121 67.8
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 8.8e-36 153.7 119 68.9
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 1.1e-35 153.3 119 68.9
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.5e-35 152.9 118 69.5
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 2.0e-35 152.5 121 66.9
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.6e-35 152.1 117 70.1
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.6e-35 152.1 117 70.1
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 2.6e-35 152.1 119 68.9
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 2.6e-35 152.1 119 68.9
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 2.6e-35 152.1 117 70.1
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 2.6e-35 152.1 117 70.1
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 2.6e-35 152.1 117 70.1
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 3.3e-35 151.8 117 69.2
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 3.3e-35 151.8 117 69.2
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 3.3e-35 151.8 117 69.2
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 3.3e-35 151.8 117 69.2
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.3e-35 151.8 110 73.6
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 3.3e-35 151.8 117 69.2
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 4.4e-35 151.4 117 69.2
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 4.4e-35 151.4 121 66.1
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 4.4e-35 151.4 117 69.2
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 5.7e-35 151.0 117 69.2
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 5.7e-35 151.0 117 69.2
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 5.7e-35 151.0 117 69.2
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 5.7e-35 151.0 117 69.2
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 5.7e-35 151.0 117 69.2
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 5.7e-35 151.0 117 69.2
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 7.4e-35 150.6 117 69.2
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 7.4e-35 150.6 117 69.2
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 9.7e-35 150.2 117 68.4
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 9.7e-35 150.2 117 69.2
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 9.7e-35 150.2 117 69.2
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 9.7e-35 150.2 117 68.4
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 1.3e-34 149.8 117 68.4
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.3e-34 149.8 118 68.6
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.3e-34 149.8 117 68.4
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.3e-34 149.8 117 68.4
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.3e-34 149.8 117 68.4
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 1.7e-34 149.4 117 69.2
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.7e-34 149.4 117 68.4
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 1.7e-34 149.4 117 68.4
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.2e-34 149.1 117 68.4
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 2.2e-34 149.1 117 68.4
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 2.2e-34 149.1 117 69.2
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 2.2e-34 149.1 117 68.4
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 2.2e-34 149.1 117 68.4
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.8e-34 148.7 118 68.6
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 2.8e-34 148.7 118 66.9
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 2.8e-34 148.7 117 67.5
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 4.8e-34 147.9 117 66.7
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 4.8e-34 147.9 117 66.7
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 4.8e-34 147.9 117 67.5
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 6.3e-34 147.5 117 67.5
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 8.2e-34 147.1 117 68.4
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.1e-33 146.7 117 66.7
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 1.1e-33 146.7 117 67.5
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.1e-33 146.7 117 67.5
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.4e-33 146.4 117 66.7
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 1.4e-33 146.4 117 66.7
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.4e-33 146.4 117 66.7
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.8e-33 146.0 117 65.8
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 1.8e-33 146.0 117 67.5
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.8e-33 146.0 117 66.7
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 1.8e-33 146.0 117 67.5
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.8e-33 146.0 117 67.5
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 1.8e-33 146.0 117 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 2.4e-33 145.6 117 66.7
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 2.4e-33 145.6 117 65.8
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 2.4e-33 145.6 117 65.8
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 3.1e-33 145.2 117 66.7
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 3.1e-33 145.2 117 66.7
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 3.1e-33 145.2 117 65.8
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 4.1e-33 144.8 117 67.5
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 4.1e-33 144.8 117 65.8
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 4.1e-33 144.8 117 65.8
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 5.3e-33 144.4 117 66.7
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 5.3e-33 144.4 123 65.9
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 1.2e-32 143.3 117 66.7
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 2.0e-32 142.5 117 65.0
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 2.0e-32 142.5 118 64.4
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 2.6e-32 142.1 117 64.1
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 3.5e-32 141.7 117 65.8
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 4.5e-32 141.4 117 64.1
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 2.2e-31 139.0 132 61.4
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 5.0e-31 137.9 137 56.2
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 6.5e-31 137.5 112 67.0
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 1.1e-30 136.7 112 65.2
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 5.5e-30 134.4 117 60.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 4.7e-29 131.3 117 59.0
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 2.0e-27 125.9 117 54.7
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 4.8e-26 121.3 181 45.9
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.6e-24 115.5 93 67.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 5.9e-24 114.4 93 66.7
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 2.2e-23 112.5 75 77.3
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 8.5e-23 110.5 100 62.0
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 4.2e-22 108.2 52 100.0
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 7.2e-22 107.5 52 98.1
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 1.2e-21 106.7 52 96.2
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 3.6e-21 105.1 52 98.1
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 3.6e-21 105.1 52 98.1
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 8.0e-21 104.0 52 96.2
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 2.6e-19 99.0 118 47.5
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 3.7e-18 95.1 95 57.9
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 4.1e-17 91.7 209 34.9
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.2e-15 85.9 129 39.5
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.8e-09 66.2 35 85.7
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.4e-09 65.9 35 85.7
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 3.1e-09 65.5 35 85.7
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 3.1e-09 65.5 35 85.7
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.0e-09 64.3 35 82.9
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 7.0e-09 64.3 35 82.9
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 5.9e-08 61.2 35 85.7
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 1.7e-07 59.7 28 96.4
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.0e-07 58.2 56 51.8
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 9.5e-06 53.9 34 70.6


User provided reference genes

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