Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00394 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 0.0e+00 1169.8 601 100.0
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 4.0e-233 811.6 507 81.7
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 6.0e-229 797.7 517 79.3
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 1.3e-226 790.0 510 81.2
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 4.0e-225 785.0 558 72.6
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 4.0e-225 785.0 558 72.6
Rhsim09G0063700 Rhododendron simsii HOM05D004417 ORTHO05D005528 2.7e-221 772.3 509 79.2
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 1.6e-213 746.5 501 75.2
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 4.5e-208 728.4 554 67.9
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 1.1e-206 723.8 506 73.3
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 1.0e-204 717.2 554 68.1
CiPaw.05G190700 Carya illinoinensis HOM05D004417 ORTHO05D005528 8.7e-204 714.1 558 67.2
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 4.3e-203 711.8 506 72.1
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 4.3e-203 711.8 557 66.8
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 9.6e-203 710.7 511 72.8
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 4.8e-202 708.4 493 73.4
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 6.3e-202 708.0 554 66.8
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 4.1e-201 705.3 506 71.5
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 1.2e-200 703.7 554 67.9
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 1.5e-200 703.4 506 71.5
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 4.5e-200 701.8 506 72.1
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 7.6e-200 701.0 551 65.9
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 7.6e-200 701.0 557 66.1
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 2.2e-199 699.5 557 65.9
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 8.5e-199 697.6 506 70.6
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 1.1e-198 697.2 514 68.3
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 1.9e-198 696.4 511 69.5
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 7.2e-198 694.5 511 69.9
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 1.2e-197 693.7 552 65.2
Nitab4.5_0008542g0010 Nicotiana tabacum HOM05D004417 ORTHO05D005528 4.6e-197 691.8 454 76.4
Nitab4.5_0000018g0010 Nicotiana tabacum HOM05D004417 ORTHO05D005528 7.9e-197 691.0 442 77.6
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 1.0e-196 690.6 514 67.9
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 1.8e-196 689.9 508 70.3
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 1.8e-196 689.9 511 67.7
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 2.3e-196 689.5 514 67.7
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 2.3e-196 689.5 507 69.0
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 6.7e-196 688.0 497 72.8
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 9.7e-195 684.1 559 63.9
Solyc05g016460.2 Solanum lycopersicum HOM05D004417 ORTHO05D005528 9.7e-195 684.1 497 71.8
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 2.2e-194 682.9 511 68.3
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 8.2e-194 681.0 507 71.2
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 2.4e-193 679.5 559 66.2
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 5.3e-193 678.3 507 70.2
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 4.5e-192 675.2 503 69.4
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 1.0e-191 674.1 508 68.1
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 5.0e-191 671.8 517 66.2
VMungo1215G3220 Vigna mungo HOM05D004417 ORTHO05D005528 8.5e-191 671.0 535 65.6
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 1.1e-190 670.6 516 67.8
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 1.9e-190 669.8 509 68.2
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 4.2e-190 668.7 474 72.8
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 4.2e-190 668.7 555 63.4
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 2.7e-189 666.0 474 71.1
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 3.6e-189 665.6 511 67.5
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 8.8e-188 661.0 557 61.8
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 1.1e-187 660.6 557 61.9
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 4.4e-187 658.7 505 66.7
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 1.7e-186 656.8 421 78.9
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 4.1e-185 652.1 517 66.0
Cpa.g.sc2.220 Carica papaya HOM05D004417 ORTHO05D005528 1.5e-184 650.2 413 78.0
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 2.0e-184 649.8 562 60.9
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 1.6e-181 640.2 540 62.2
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 2.0e-179 633.3 516 64.3
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 9.7e-179 630.9 561 60.6
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 1.7e-178 630.2 508 66.7
arahy.Tifrunner.gnm1.ann1.LF64TX Arachis hypogaea HOM05D004417 ORTHO05D005528 3.1e-177 625.9 479 67.0
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 9.1e-177 624.4 555 59.8
Haze_10919 Corylus avellana HOM05D004417 ORTHO05D005528 3.5e-176 622.5 433 74.1
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 2.1e-173 613.2 500 67.0
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 4.7e-173 612.1 573 58.5
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 1.7e-170 603.6 561 58.1
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 4.8e-170 602.1 494 64.6
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 1.1e-169 600.9 560 57.5
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 7.0e-169 598.2 590 56.8
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 7.7e-168 594.7 577 57.5
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 1.3e-167 594.0 568 57.6
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 4.0e-164 582.4 578 56.1
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 2.0e-163 580.1 530 57.9
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 9.8e-163 577.8 413 71.4
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 1.3e-162 577.4 562 58.7
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 2.2e-162 576.6 532 59.6
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 3.2e-158 562.8 553 55.0
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 4.0e-156 555.8 507 58.0
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 2.6e-155 553.1 525 55.0
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 6.3e-154 548.5 511 57.5
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 1.1e-153 547.7 527 54.6
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 5.0e-151 538.9 504 56.7
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 1.5e-150 537.3 564 52.1
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 1.9e-150 537.0 555 54.4
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 1.9e-150 537.0 554 53.4
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 2.5e-150 536.6 554 53.4
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 2.8e-149 533.1 462 60.4
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 8.0e-149 531.6 564 51.8
HPP92_024821 Vanilla planifolia HOM05D004417 ORTHO05D005528 1.4e-148 530.8 493 56.0
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 9.8e-147 524.6 560 53.0
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 1.7e-146 523.9 555 53.0
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 3.2e-145 519.6 560 53.0
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 5.4e-145 518.8 555 54.1
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 1.0e-143 514.6 557 52.6
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 2.0e-139 500.4 363 70.5
Gohir.A03G118200 Gossypium hirsutum HOM05D004417 ORTHO05D005528 3.4e-139 499.6 363 70.5
SEGI_05575 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 8.3e-138 495.0 499 53.7
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 1.3e-135 487.6 487 55.6
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 1.7e-135 487.3 487 55.6
SHI04470 Sapria himalayana HOM05D004417 ORTHO05D005528 5.0e-135 485.7 501 52.5
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 4.1e-129 466.1 440 60.2
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 2.1e-128 463.8 332 68.4
unitig_899.g15633 Utricularia gibba HOM05D004417 ORTHO05D005528 9.3e-113 411.8 518 48.8
Psat0ss9816g0080 Pisum sativum HOM05D004417 ORTHO05D005528 6.2e-109 399.1 284 68.3
Psat0ss9816g0160 Pisum sativum HOM05D004417 ORTHO05D005528 1.1e-94 351.7 250 68.4
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 1.3e-87 328.2 479 40.3
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 4.2e-81 306.6 483 38.3
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 6.1e-64 249.6 258 60.5
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 5.2e-63 246.5 451 36.1
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 6.1e-32 143.3 129 57.4
Gohir.D01G141400 Gossypium hirsutum HOM05D004417 ORTHO05D000624 6.8e-23 113.2 78 64.1
Gorai.002G174000 Gossypium raimondii HOM05D004417 ORTHO05D000624 6.8e-23 113.2 78 64.1
Psat5g193520 Pisum sativum HOM05D001137 ORTHO05D001967 3.9e-18 97.4 74 60.8
Psat7g192520 Pisum sativum HOM05D002736 ORTHO05D018191 4.3e-09 67.4 160 35.6


User provided reference genes

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