Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00385 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.3e-73 279.6 139 100.0
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 4.1e-40 168.3 96 88.5
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 1.2e-39 166.8 96 87.5
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 1.6e-39 166.4 96 87.5
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 6.0e-39 164.5 96 84.4
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 2.3e-38 162.5 96 82.3
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 5.0e-38 161.4 96 84.4
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 5.0e-38 161.4 96 81.2
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 5.0e-38 161.4 96 82.3
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 6.6e-38 161.0 96 82.3
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 6.6e-38 161.0 96 82.3
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 8.6e-38 160.6 104 76.9
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 1.1e-37 160.2 96 81.2
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 1.5e-37 159.8 104 76.0
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 1.9e-37 159.5 96 80.2
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 2.5e-37 159.1 96 81.2
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 2.5e-37 159.1 96 81.2
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 3.3e-37 158.7 96 79.2
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 5.6e-37 157.9 96 81.2
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 5.6e-37 157.9 96 80.2
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 7.3e-37 157.5 84 89.3
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 7.3e-37 157.5 96 80.2
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 9.5e-37 157.1 96 80.2
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 9.5e-37 157.1 88 84.1
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 1.2e-36 156.8 88 84.1
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 1.2e-36 156.8 93 82.8
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 1.2e-36 156.8 96 81.2
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 1.2e-36 156.8 96 80.2
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 1.6e-36 156.4 96 81.2
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 1.6e-36 156.4 96 80.2
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.6e-36 156.4 96 80.2
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 1.6e-36 156.4 95 81.1
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 2.1e-36 156.0 96 81.2
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 2.8e-36 155.6 96 79.2
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 2.8e-36 155.6 96 79.2
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 4.7e-36 154.8 84 89.3
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 4.7e-36 154.8 96 77.1
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 4.7e-36 154.8 104 74.0
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 8.1e-36 154.1 96 76.0
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 8.1e-36 154.1 96 76.0
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.1e-36 154.1 83 88.0
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.1e-36 154.1 83 88.0
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 8.1e-36 154.1 83 88.0
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 8.1e-36 154.1 96 79.2
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 1.4e-35 153.3 95 76.8
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 1.4e-35 153.3 88 87.5
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 1.4e-35 153.3 95 76.8
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 1.4e-35 153.3 95 77.9
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 1.8e-35 152.9 96 79.2
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 1.8e-35 152.9 95 75.8
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 1.8e-35 152.9 84 86.9
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 3.1e-35 152.1 96 76.0
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 5.2e-35 151.4 96 79.2
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 6.8e-35 151.0 84 83.3
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 6.8e-35 151.0 96 76.0
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 8.9e-35 150.6 84 82.1
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 8.9e-35 150.6 87 81.6
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 1.2e-34 150.2 84 82.1
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 1.2e-34 150.2 81 87.7
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 1.2e-34 150.2 100 74.0
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 5.8e-34 147.9 96 74.0
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 5.8e-34 147.9 96 74.0
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 5.8e-34 147.9 96 74.0
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.9e-33 145.6 104 68.3
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 3.7e-33 145.2 93 78.5
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 4.9e-33 144.8 85 83.5
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 4.9e-33 144.8 104 69.2
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 8.3e-33 144.1 84 83.3
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 1.1e-32 143.7 96 75.0
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.1e-32 143.7 95 75.8
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 1.4e-32 143.3 93 77.4
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 1.4e-32 143.3 120 64.2
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 3.2e-32 142.1 80 85.0
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 9.2e-32 140.6 83 79.5
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 1.2e-31 140.2 86 76.7
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 2.1e-31 139.4 86 76.7
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 4.6e-31 138.3 83 77.1
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 6.0e-31 137.9 96 71.9
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 6.0e-31 137.9 88 72.7
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 6.0e-31 137.9 88 73.9
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 7.8e-31 137.5 86 75.6
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 7.8e-31 137.5 86 75.6
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 1.3e-30 136.7 101 69.3
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 2.3e-30 136.0 101 67.3
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 2.3e-30 136.0 96 74.0
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 3.9e-30 135.2 80 78.8
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 6.6e-30 134.4 104 64.4
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 8.6e-30 134.0 80 77.5
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 8.6e-30 134.0 80 77.5
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 8.6e-30 134.0 80 77.5
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 1.1e-29 133.7 86 73.3
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 1.1e-29 133.7 80 76.2
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 1.1e-29 133.7 84 76.2
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 1.1e-29 133.7 84 76.2
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 1.1e-29 133.7 80 77.5
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 1.1e-29 133.7 84 76.2
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.5e-29 133.3 75 89.3
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 2.5e-29 132.5 96 72.9
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 2.1e-28 129.4 96 70.8
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 2.1e-28 129.4 88 73.9
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 6.2e-28 127.9 104 61.5
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 8.1e-28 127.5 96 66.7
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 1.4e-27 126.7 88 76.1
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 1.4e-27 126.7 82 80.5
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 1.4e-27 126.7 82 80.5
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 5.2e-27 124.8 96 69.8
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 3.4e-26 122.1 89 68.5
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 7.6e-26 120.9 85 68.2
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 9.9e-26 120.6 84 67.9
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 1.3e-25 120.2 84 67.9
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 1.4e-24 116.7 84 67.9
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 1.6e-23 113.2 117 53.8
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 4.6e-23 111.7 87 67.8
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 7.3e-21 104.4 106 51.9
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 9.6e-21 104.0 93 61.3
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.2e-20 103.6 71 69.0
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 1.6e-20 103.2 93 61.3
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 6.2e-20 101.3 115 47.0
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 6.2e-20 101.3 96 55.2
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 3.1e-19 99.0 107 46.7
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 1.5e-18 96.7 110 50.9
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 2.0e-18 96.3 62 74.2
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.9e-16 89.7 86 52.3
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 3.0e-14 82.4 91 47.3
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 3.2e-08 62.4 94 40.4


User provided reference genes

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