Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00384 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 4.7e-94 347.8 172 100.0
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 4.8e-54 214.9 110 93.6
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 1.8e-53 213.0 110 92.7
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 1.8e-53 213.0 108 96.3
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 1.8e-53 213.0 108 96.3
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 1.8e-53 213.0 108 96.3
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 1.8e-53 213.0 108 96.3
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 2.4e-53 212.6 108 96.3
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.4e-53 212.6 108 96.3
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.4e-53 212.6 108 96.3
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 4.0e-53 211.8 108 95.4
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 5.3e-53 211.5 108 95.4
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 5.3e-53 211.5 108 95.4
Hma1.2p1_0384F.1_g140840 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 9.0e-53 210.7 107 96.3
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 9.0e-53 210.7 128 83.6
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 1.2e-52 210.3 108 96.3
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 1.2e-52 210.3 108 94.4
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 1.2e-52 210.3 108 95.4
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 1.5e-52 209.9 108 94.4
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 2.0e-52 209.5 108 93.5
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 2.6e-52 209.1 108 93.5
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 3.4e-52 208.8 108 93.5
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 3.4e-52 208.8 108 93.5
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 3.4e-52 208.8 108 93.5
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 3.4e-52 208.8 108 93.5
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 4.5e-52 208.4 107 95.3
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 5.8e-52 208.0 108 94.4
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 9.9e-52 207.2 108 92.6
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 9.9e-52 207.2 122 83.6
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 1.3e-51 206.8 108 92.6
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 1.3e-51 206.8 108 92.6
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 1.3e-51 206.8 122 83.6
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 1.7e-51 206.5 113 91.2
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 2.2e-51 206.1 116 87.1
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.2e-51 206.1 108 90.7
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 2.9e-51 205.7 107 93.5
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 2.9e-51 205.7 108 92.6
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 3.8e-51 205.3 108 91.7
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 3.8e-51 205.3 108 91.7
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 6.4e-51 204.5 108 91.7
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 6.4e-51 204.5 108 91.7
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 6.4e-51 204.5 108 91.7
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 1.1e-50 203.8 108 91.7
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 1.1e-50 203.8 108 91.7
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 1.9e-50 203.0 108 90.7
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 1.9e-50 203.0 108 89.8
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 1.9e-50 203.0 108 90.7
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 3.2e-50 202.2 108 88.9
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 3.2e-50 202.2 108 88.9
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 7.1e-50 201.1 108 88.9
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 2.1e-49 199.5 108 88.9
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 4.6e-49 198.4 108 88.0
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 4.6e-49 198.4 108 86.1
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 4.6e-49 198.4 108 89.8
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 7.9e-49 197.6 108 88.9
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 1.0e-48 197.2 108 87.0
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 1.0e-48 197.2 108 86.1
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 1.3e-48 196.8 108 87.0
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 1.8e-48 196.4 108 88.9
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 2.3e-48 196.1 108 87.0
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 3.0e-48 195.7 108 87.0
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 3.0e-48 195.7 108 88.9
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 3.9e-48 195.3 136 73.5
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 6.7e-48 194.5 108 86.1
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 1.1e-47 193.7 108 87.0
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 1.5e-47 193.4 108 85.2
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 1.5e-47 193.4 108 87.0
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 1.5e-47 193.4 108 87.0
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 1.9e-47 193.0 108 87.0
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 1.9e-47 193.0 108 87.0
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.9e-47 193.0 108 87.0
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 1.9e-47 193.0 108 87.0
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.5e-47 192.6 108 87.0
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 2.5e-47 192.6 108 86.1
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 2.5e-47 192.6 108 86.1
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 4.3e-47 191.8 108 86.1
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 4.3e-47 191.8 108 86.1
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 5.6e-47 191.4 108 86.1
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 9.6e-47 190.7 107 86.9
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 9.6e-47 190.7 107 86.9
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 1.3e-46 190.3 108 85.2
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 1.3e-46 190.3 108 85.2
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 1.3e-46 190.3 108 85.2
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 2.1e-46 189.5 107 86.0
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 2.1e-46 189.5 107 86.0
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 3.7e-46 188.7 108 84.3
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 4.8e-46 188.3 122 78.7
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 4.8e-46 188.3 118 81.4
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 6.2e-46 188.0 108 83.3
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 6.2e-46 188.0 122 78.7
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 6.2e-46 188.0 108 82.4
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 8.1e-46 187.6 108 84.3
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.1e-45 187.2 113 85.0
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 1.1e-45 187.2 113 85.0
CDE10G0060 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 3.8e-43 178.7 109 78.0
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 1.4e-42 176.8 115 76.5
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 3.2e-42 175.6 108 75.0
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 1.2e-41 173.7 108 74.1
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 2.1e-41 172.9 108 75.9
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 3.5e-41 172.2 108 74.1
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 1.8e-40 169.9 122 68.9
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 2.3e-40 169.5 108 79.6
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 6.7e-40 167.9 108 78.7
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 1.1e-39 167.2 175 53.1
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 1.1e-39 167.2 114 76.3
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 5.6e-39 164.9 141 63.8
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 3.9e-32 142.1 101 73.3
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 6.7e-32 141.4 125 56.0
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 4.3e-31 138.7 108 67.6
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 2.2e-30 136.3 108 60.2
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 4.8e-30 135.2 108 58.3
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 1.1e-29 134.0 107 59.8
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 1.4e-29 133.7 82 85.4
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.5e-28 130.2 108 57.4
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 3.8e-27 125.6 108 63.0
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 4.3e-23 112.1 75 73.3
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 1.3e-22 110.5 60 85.0
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 8.5e-19 97.8 107 47.7
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 1.9e-18 96.7 105 43.8
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 6.3e-14 81.6 89 55.1
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 6.3e-14 81.6 89 55.1
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 5.0e-11 72.0 39 89.7
QL08p054317 Quercus lobata HOM05D003976 ORTHO05D004711 4.2e-10 68.9 52 67.3
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 2.7e-09 66.2 41 78.0
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.8e-08 63.5 29 96.6
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 8.8e-08 61.2 30 90.0
Sc23g0003860 Simmondsia chinensis HOM05D048433 ORTHO05D389713 4.8e-06 55.5 30 86.7


User provided reference genes

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