Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00383 Vaccinium macrocarpon HOM05D003976 ORTHO05D004711 1.4e-204 716.1 374 100.0
Rhsim03G0115800 Rhododendron simsii HOM05D003976 ORTHO05D004711 7.7e-158 560.8 368 84.2
Dinv31232 Davidia involucrata HOM05D003976 ORTHO05D004711 3.7e-136 488.8 366 73.0
CSS0009675 Camellia sinensis var. sinensis HOM05D003976 ORTHO05D004711 5.4e-135 485.0 366 72.7
Nitab4.5_0001450g0090 Nicotiana tabacum HOM05D003976 ORTHO05D004711 9.1e-135 484.2 366 72.4
Nitab4.5_0001659g0180 Nicotiana tabacum HOM05D003976 ORTHO05D004711 2.9e-133 479.2 366 72.4
GSVIVG01016219001 Vitis vinifera HOM05D003976 ORTHO05D004711 1.0e-130 470.7 365 70.7
Prupe.2G208700 Prunus persica HOM05D003976 ORTHO05D004711 1.8e-130 469.9 366 70.8
Peaxi162Scf00145g01215 Petunia axillaris HOM05D003976 ORTHO05D004711 5.2e-130 468.4 363 71.3
Nn4g25176 Nelumbo nucifera HOM05D003976 ORTHO05D004711 2.8e-128 462.6 367 70.6
Sopen11g004150 Solanum pennellii HOM05D003976 ORTHO05D004711 3.7e-128 462.2 366 69.4
MD01G1103100 Malus domestica HOM05D003976 ORTHO05D004711 3.1e-127 459.1 366 69.4
Solyc11g008340.3 Solanum lycopersicum HOM05D003976 ORTHO05D004711 4.1e-127 458.8 366 69.4
RcHm_v2.0_Chr1g0362571 Rosa chinensis HOM05D003976 ORTHO05D004711 1.2e-126 457.2 366 69.1
Thecc.10G083800 Theobroma cacao HOM05D003976 ORTHO05D004711 1.2e-126 457.2 364 68.7
Cfa001691 Carpinus fangiana HOM05D003976 ORTHO05D004711 1.6e-126 456.8 362 69.9
Aqoxy1G01141 Aquilegia oxysepala HOM05D003976 ORTHO05D004711 2.0e-126 456.4 366 69.9
TAR633G0511 Trochodendron aralioides HOM05D003976 ORTHO05D004711 5.9e-126 454.9 365 69.6
MSTRG.27486 Avicennia marina HOM05D003976 ORTHO05D004711 1.3e-125 453.8 367 68.1
CiPaw.01G268500 Carya illinoinensis HOM05D003976 ORTHO05D004711 5.0e-125 451.8 366 69.1
Migut.F01955 Erythranthe guttata HOM05D003976 ORTHO05D004711 1.1e-124 450.7 362 68.2
PSO063G6915 Papaver somniferum HOM05D003976 ORTHO05D004711 1.5e-124 450.3 367 68.9
Duzib114G0598 Durio zibethinus HOM05D003976 ORTHO05D004711 1.9e-124 449.9 366 68.0
PGR044G0607 Punica granatum HOM05D003976 ORTHO05D004711 5.6e-124 448.4 364 67.0
SalBow4G0398 Salvia bowleyana HOM05D003976 ORTHO05D004711 9.5e-124 447.6 363 68.0
FvH4_7g18760 Fragaria vesca HOM05D003976 ORTHO05D004711 1.2e-123 447.2 366 67.2
Oeu007408.1 Olea europaea HOM05D003976 ORTHO05D004711 2.8e-123 446.0 361 67.6
PSO339G0981 Papaver somniferum HOM05D003976 ORTHO05D004711 5.2e-122 441.8 367 67.8
Gohir.A05G414300 Gossypium hirsutum HOM05D003976 ORTHO05D004711 6.8e-122 441.4 366 66.4
TWI63G1397 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 8.9e-122 441.0 366 67.2
Ca_00795_v3 Cicer arietinum L. HOM05D003976 ORTHO05D004711 1.5e-121 440.3 364 66.8
TWI15G0187 Tripterygium wilfordii HOM05D003976 ORTHO05D004711 1.5e-121 440.3 366 66.7
CiPaw.02G172200 Carya illinoinensis HOM05D003976 ORTHO05D004711 1.3e-120 437.2 366 68.0
Phvul.007G098800 Phaseolus vulgaris HOM05D003976 ORTHO05D004711 1.3e-120 437.2 364 65.9
Gohir.D04G001800 Gossypium hirsutum HOM05D003976 ORTHO05D004711 1.7e-120 436.8 366 65.8
DCAR_019085 Daucus carota HOM05D003976 ORTHO05D004711 2.2e-120 436.4 366 67.2
Glyma.20G182800 Glycine max HOM05D003976 ORTHO05D004711 2.9e-120 436.0 364 65.7
Gorai.012G002900 Gossypium raimondii HOM05D003976 ORTHO05D004711 3.7e-120 435.6 366 65.6
CANSAT56G1655 Cannabis sativa HOM05D003976 ORTHO05D004711 4.9e-120 435.3 366 67.5
Medtr5g017640 Medicago truncatula HOM05D003976 ORTHO05D004711 4.9e-120 435.3 364 66.5
Glyma.10G207900 Glycine max HOM05D003976 ORTHO05D004711 1.1e-119 434.1 364 65.7
Hund17145 Selenicereus undatus HOM05D003976 ORTHO05D004711 1.1e-119 434.1 364 66.2
Lj5g0000763 Lotus japonicus HOM05D003976 ORTHO05D004711 1.9e-119 433.3 364 66.2
FAN10G3044 Fragaria x ananassa HOM05D003976 ORTHO05D004711 4.1e-119 432.2 371 64.4
Nn3g18724 Nelumbo nucifera HOM05D003976 ORTHO05D004711 4.1e-119 432.2 366 67.5
FAN01G1125 Fragaria x ananassa HOM05D003976 ORTHO05D004711 3.5e-118 429.1 371 63.9
Lalb_Chr06g0170321 Lupinus albus HOM05D003976 ORTHO05D004711 3.5e-118 429.1 364 65.1
CsaV3_6G036710 Cucumis sativus L. HOM05D003976 ORTHO05D004711 6.0e-118 428.3 366 65.3
Potri.008G035300 Populus trichocarpa HOM05D003976 ORTHO05D004711 7.8e-118 427.9 366 66.9
Sed0018764 Sechium edule HOM05D003976 ORTHO05D004711 1.7e-117 426.8 366 65.8
Potri.010G227100 Populus trichocarpa HOM05D003976 ORTHO05D004711 3.0e-117 426.0 366 65.8
Medtr8g104855 Medicago truncatula HOM05D003976 ORTHO05D004711 3.9e-117 425.6 370 64.9
Manes.01G054600 Manihot esculenta HOM05D003976 ORTHO05D004711 8.6e-117 424.5 366 65.6
ATR0730G009 Amborella trichopoda HOM05D003976 ORTHO05D004711 1.5e-116 423.7 363 64.5
Sc06g0007810 Simmondsia chinensis HOM05D003976 ORTHO05D004711 1.5e-116 423.7 366 64.5
TPR.G32679 Trifolium pratense HOM05D003976 ORTHO05D004711 3.3e-116 422.5 364 64.3
Lalb_Chr21g0313681 Lupinus albus HOM05D003976 ORTHO05D004711 7.3e-116 421.4 365 64.7
Psat7g009400 Pisum sativum HOM05D003976 ORTHO05D004711 9.5e-116 421.0 364 64.0
VMungo0251G3371 Vigna mungo HOM05D003976 ORTHO05D004711 9.5e-116 421.0 364 64.3
FAN03G2922 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.6e-115 420.2 366 64.5
FAN06G0006 Fragaria x ananassa HOM05D003976 ORTHO05D004711 1.8e-114 416.8 366 63.7
SGA_v2.0_scaffold100G29552 Striga asiatica HOM05D003976 ORTHO05D004711 5.8e-113 411.8 381 61.2
Haze_16845 Corylus avellana HOM05D003976 ORTHO05D004711 1.7e-112 410.2 372 63.4
Cpa.g.sc53.132 Carica papaya HOM05D003976 ORTHO05D004711 2.2e-112 409.8 365 64.7
THA.LOC104826898 Tarenaya hassleriana HOM05D003976 ORTHO05D004711 6.4e-112 408.3 366 63.1
Atru.chr12.845 Acer truncatum HOM05D003976 ORTHO05D004711 3.2e-111 406.0 337 67.1
Carub.0003s0956 Capsella rubella HOM05D003976 ORTHO05D004711 2.1e-110 403.3 366 62.0
AL3G21710 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 4.6e-110 402.1 366 61.5
FAN06G1302 Fragaria x ananassa HOM05D003976 ORTHO05D004711 7.8e-110 401.4 366 61.2
CARHR084860 Cardamine hirsuta HOM05D003976 ORTHO05D004711 1.0e-109 401.0 366 61.5
AT3G10380 Arabidopsis thaliana HOM05D003976 ORTHO05D004711 2.3e-109 399.8 366 61.5
Actinidia18607 Actinidia chinensis HOM05D003976 ORTHO05D004711 3.9e-109 399.1 366 62.8
BolC1t05404H Brassica oleracea HOM05D003976 ORTHO05D004711 8.6e-109 397.9 366 61.2
Sp3g08650 Schrenkiella parvula HOM05D003976 ORTHO05D004711 1.5e-108 397.1 366 61.5
BcaC05g29471 Brassica carinata HOM05D003976 ORTHO05D004711 4.3e-108 395.6 366 60.9
C05p57780 Brassica napus HOM05D003976 ORTHO05D004711 4.3e-108 395.6 366 60.9
BolC5t34435H Brassica oleracea HOM05D003976 ORTHO05D004711 4.3e-108 395.6 366 60.9
A05p38770 Brassica napus HOM05D003976 ORTHO05D004711 7.3e-108 394.8 366 60.9
A01p41880 Brassica napus HOM05D003976 ORTHO05D004711 2.8e-107 392.9 366 60.1
BraA01t04258Z Brassica rapa HOM05D003976 ORTHO05D004711 2.8e-107 392.9 366 60.1
COL.COLO4_34214 Corchorus olitorius HOM05D003976 ORTHO05D004711 2.8e-107 392.9 385 60.3
Os08g0318500 Oryza sativa ssp. japonica HOM05D003976 ORTHO05D004711 2.8e-107 392.9 366 59.6
Gohir.D10G210600 Gossypium hirsutum HOM05D003976 ORTHO05D004711 6.2e-107 391.7 366 59.6
Aa31LG3G2960 Aethionema arabicum HOM05D003976 ORTHO05D004711 1.1e-106 391.0 366 61.5
BcaB04g21214 Brassica carinata HOM05D003976 ORTHO05D004711 1.4e-106 390.6 366 59.8
AUR62013811 Chenopodium quinoa HOM05D003976 ORTHO05D004711 1.4e-106 390.6 365 61.9
HanXRQChr05g0161261 Helianthus annuus HOM05D003976 ORTHO05D004711 1.4e-106 390.6 364 61.3
AUR62023345 Chenopodium quinoa HOM05D003976 ORTHO05D004711 4.0e-106 389.0 364 61.8
ECA238G0457 Erigeron canadensis HOM05D003976 ORTHO05D004711 4.0e-106 389.0 364 60.2
MD07G1169800 Malus domestica HOM05D003976 ORTHO05D004711 4.0e-106 389.0 321 67.3
HanXRQChr14g0456581 Helianthus annuus HOM05D003976 ORTHO05D004711 6.8e-106 388.3 364 60.7
Zm00001eb330040 Zea mays HOM05D003976 ORTHO05D004711 2.6e-105 386.3 366 60.1
C03p44100 Brassica napus HOM05D003976 ORTHO05D004711 1.7e-104 383.6 366 59.8
BolC3t16685H Brassica oleracea HOM05D003976 ORTHO05D004711 2.2e-104 383.3 366 59.6
HanXRQChr14g0455711 Helianthus annuus HOM05D003976 ORTHO05D004711 5.4e-103 378.6 365 60.0
Lalb_Chr21g0313551 Lupinus albus HOM05D003976 ORTHO05D004711 2.1e-102 376.7 327 64.5
Lj2C20G12 Lonicera japonica HOM05D003976 ORTHO05D004711 1.3e-101 374.0 366 59.3
QL08p054329 Quercus lobata HOM05D003976 ORTHO05D004711 2.3e-101 373.2 315 67.6
Sabra10G0175200 Salix brachista HOM05D003976 ORTHO05D004711 3.9e-101 372.5 368 59.8
Sabra08G0023600 Salix brachista HOM05D003976 ORTHO05D004711 1.5e-100 370.5 325 65.5
Gohir.A10G202400 Gossypium hirsutum HOM05D003976 ORTHO05D004711 2.8e-99 366.3 386 54.9
FAN10G1353 Fragaria x ananassa HOM05D003976 ORTHO05D004711 2.0e-97 360.1 337 60.8
Thhalv10019960m.g Eutrema salsugineum HOM05D003976 ORTHO05D004711 7.6e-97 358.2 371 57.1
BraA05t22669Z Brassica rapa HOM05D003976 ORTHO05D004711 1.7e-96 357.1 337 60.5
SEGI_27589 Sequoiadendron giganteum HOM05D003976 ORTHO05D004711 8.4e-96 354.8 364 55.5
BraA03t12817Z Brassica rapa HOM05D003976 ORTHO05D004711 2.4e-95 353.2 366 56.8
A03p36500 Brassica napus HOM05D003976 ORTHO05D004711 3.5e-94 349.4 366 56.3
Lsat_1_v5_gn_2_113061 Lactuca sativa HOM05D003976 ORTHO05D004711 1.9e-92 343.6 376 55.1
BcaC09g48100 Brassica carinata HOM05D003976 ORTHO05D004711 2.8e-91 339.7 353 56.4
EL10Ac1g00696 Beta vulgaris HOM05D003976 ORTHO05D004711 1.1e-90 337.8 401 53.9
arahy.Tifrunner.gnm1.ann1.9SI57B Arachis hypogaea HOM05D003976 ORTHO05D004711 2.4e-90 336.7 364 54.9
HPP92_022853 Vanilla planifolia HOM05D003976 ORTHO05D004711 9.0e-90 334.7 369 54.5
Ciclev10030617m.g Citrus clementina HOM05D003976 ORTHO05D004711 2.2e-88 330.1 355 56.3
Cc02_g10920 Coffea canephora HOM05D003976 ORTHO05D004711 1.1e-87 327.8 238 73.5
unitig_46.g18603 Utricularia gibba HOM05D003976 ORTHO05D004711 5.4e-87 325.5 363 52.6
MBI18_g27471_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 7.1e-87 325.1 289 64.0
ClCG08G007720 Citrullus lanatus HOM05D003976 ORTHO05D004711 1.2e-86 324.3 308 60.7
Gorai.011G236100 Gossypium raimondii HOM05D003976 ORTHO05D004711 4.6e-86 322.4 366 51.9
MELO3C019825.2 Cucumis melo HOM05D003976 ORTHO05D004711 2.8e-83 313.2 350 55.4
CDE10G1014 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 1.2e-81 307.8 316 59.2
Pp3c16_24260 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.5e-76 290.8 370 45.9
Mapoly0170s0008 Marchantia polymorpha HOM05D003976 ORTHO05D004711 1.6e-70 270.8 369 42.5
SMO172G0221 Selaginella moellendorffii HOM05D003976 ORTHO05D004711 2.7e-70 270.0 365 44.9
Pp3c3_21120 Physcomitrium patens HOM05D003976 ORTHO05D004711 2.5e-68 263.5 372 43.3
Oeu033874.1 Olea europaea HOM05D003976 ORTHO05D004711 8.2e-67 258.5 223 62.8
Pp3c12_15420 Physcomitrium patens HOM05D003976 ORTHO05D004711 1.0e-64 251.5 373 41.6
CDE10G0301 Ceratophyllum demersum HOM05D003976 ORTHO05D004711 4.2e-55 219.5 172 69.8
CBR_g30687 Chara braunii HOM05D003976 ORTHO05D004711 1.5e-44 184.5 423 33.6
TPR.G33031 Trifolium pratense HOM05D003976 ORTHO05D004711 8.0e-38 162.2 144 59.0
Eucgr.K02187 Eucalyptus grandis HOM05D003976 ORTHO05D004711 6.3e-35 152.5 158 54.4
AL491U10010 Arabidopsis lyrata HOM05D003976 ORTHO05D004711 3.8e-32 143.3 103 71.8
Cc02_g10910 Coffea canephora HOM05D003976 ORTHO05D004711 1.5e-31 141.4 94 77.7
Hma1.2p1_0384F.1_g140740 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 4.4e-28 129.8 114 64.9
Prupe.5G231200 Prunus persica HOM05D003976 ORTHO05D004711 9.8e-20 102.1 94 59.6
vmacro16680 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 1.8e-18 97.8 62 85.5
vmacro23142 Vaccinium macrocarpon HOM05D002957 ORTHO05D007941 1.8e-18 97.8 62 85.5
AagrBONN_evm.TU.Sc2ySwM_228.4637 Anthoceros agrestis HOM05D003976 ORTHO05D004711 3.3e-15 87.0 203 33.0
Hma1.2p1_0384F.1_g140760 Hydrangea macrophylla HOM05D003976 ORTHO05D004711 5.7e-12 76.3 49 83.7
Aa31LG6G7350 Aethionema arabicum HOM05D003976 ORTHO05D004711 4.9e-11 73.2 53 69.8
MBI18_g27470_MAGBIO Magnolia biondii HOM05D003976 ORTHO05D004711 2.7e-09 67.4 52 57.7


User provided reference genes

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