Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 2.1e-271 938.3 454 100.0
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 5.3e-153 545.0 491 62.1
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 1.5e-126 457.2 450 54.2
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 8.2e-122 441.4 436 54.1
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 1.2e-120 437.6 444 53.2
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 4.2e-118 429.1 446 51.6
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 4.2e-118 429.1 445 51.7
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 1.4e-108 397.5 454 48.2
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 5.2e-108 395.6 436 48.2
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 9.8e-107 391.3 442 47.3
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 4.9e-106 389.0 430 50.9
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 5.4e-105 385.6 450 47.1
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 9.2e-105 384.8 443 48.1
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 9.2e-105 384.8 444 47.3
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 7.8e-104 381.7 451 46.6
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 7.8e-104 381.7 446 46.9
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 5.0e-103 379.0 439 46.5
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 6.6e-103 378.6 435 48.5
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 6.6e-103 378.6 435 47.4
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 8.6e-103 378.3 436 47.5
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 8.6e-103 378.3 435 47.8
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 8.6e-103 378.3 435 47.8
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 1.5e-102 377.5 451 46.3
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 7.3e-102 375.2 445 46.7
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 1.2e-101 374.4 436 45.6
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 2.8e-101 373.2 437 45.5
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 2.8e-101 373.2 444 46.6
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 4.0e-100 369.4 440 45.2
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 5.2e-100 369.0 451 45.0
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.8e-100 368.6 454 45.6
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 1.2e-99 367.9 455 45.3
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 2.0e-99 367.1 450 45.3
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.6e-99 366.7 437 45.3
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 4.4e-99 365.9 436 45.6
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 2.9e-98 363.2 447 45.6
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 3.7e-98 362.8 453 43.5
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 4.9e-98 362.5 453 44.6
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 6.4e-98 362.1 447 45.2
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 1.1e-97 361.3 435 46.7
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.1e-97 361.3 445 45.4
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 1.9e-97 360.5 447 44.7
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 5.4e-97 359.0 427 45.4
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 5.4e-97 359.0 446 45.5
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 7.0e-97 358.6 443 44.7
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 1.2e-96 357.8 439 46.0
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 2.7e-96 356.7 448 45.3
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 4.6e-96 355.9 448 44.4
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 3.0e-95 353.2 450 44.7
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 5.0e-95 352.4 450 42.9
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 8.6e-95 351.7 437 45.3
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 1.1e-94 351.3 451 42.8
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 1.1e-94 351.3 434 44.0
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 3.3e-94 349.7 449 44.1
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.3e-94 349.4 465 43.7
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 9.5e-94 348.2 455 44.0
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 9.5e-94 348.2 451 43.7
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 1.6e-93 347.4 437 44.6
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 1.6e-93 347.4 455 44.2
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 2.1e-93 347.1 436 43.1
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 4.7e-93 345.9 443 45.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 1.1e-92 344.7 435 43.4
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 1.8e-92 344.0 455 43.5
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 4.0e-92 342.8 427 44.0
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.5e-91 340.9 455 43.1
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 2.6e-91 340.1 452 41.4
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 7.5e-91 338.6 440 42.7
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 4.9e-90 335.9 432 43.5
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 3.2e-89 333.2 443 42.2
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 9.2e-89 331.6 437 42.8
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 1.2e-88 331.3 442 41.9
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 2.1e-88 330.5 443 42.2
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 2.7e-88 330.1 447 42.7
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.5e-88 329.7 436 42.7
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 4.6e-88 329.3 437 41.4
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.0e-87 328.2 436 42.4
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 3.0e-87 326.6 436 42.4
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 6.6e-87 325.5 441 42.0
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 8.6e-87 325.1 431 42.7
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.1e-86 324.7 449 42.8
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 1.5e-86 324.3 397 46.6
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 4.3e-86 322.8 434 42.6
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 5.6e-86 322.4 455 40.2
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 4.0e-84 316.2 444 40.8
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 6.8e-84 315.5 436 40.8
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 6.8e-84 315.5 436 40.8
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 4.4e-83 312.8 427 41.0
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 1.7e-82 310.8 429 41.0
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 2.9e-82 310.1 451 41.0
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 2.9e-82 310.1 436 40.8
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 2.1e-80 303.9 436 40.1
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 3.6e-77 293.1 439 38.3
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 5.8e-75 285.8 453 38.2
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.2e-74 283.9 446 38.3
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 4.9e-74 282.7 437 39.4
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.9e-73 280.8 452 35.8
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 3.2e-73 280.0 454 37.4
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 9.2e-73 278.5 448 36.8
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 3.1e-68 263.5 276 52.2
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 2.6e-67 260.4 436 36.5
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.8e-55 221.1 431 31.6
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 5.6e-54 216.1 442 31.0
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.1e-49 201.8 294 38.8
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 1.3e-45 188.3 131 71.8
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.1e-44 185.3 429 29.6
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 1.7e-42 177.9 244 39.8
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 9.3e-41 172.2 449 28.3
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 4.5e-35 153.3 121 61.2
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 6.7e-31 139.4 86 64.0
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 1.7e-29 134.8 389 26.5
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 1.8e-07 61.6 65 55.4


User provided reference genes

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