Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00280 Vaccinium macrocarpon HOM05D007538 ORTHO05D009464 8.4e-174 613.6 315 100.0
Rhsim11G0021400 Rhododendron simsii HOM05D007538 ORTHO05D009464 2.0e-111 406.4 330 70.3
CSS0028782 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 2.8e-92 342.8 328 61.3
CSS0038946 Camellia sinensis var. sinensis HOM05D007538 ORTHO05D009464 6.2e-92 341.7 328 61.3
Actinidia01319 Actinidia chinensis HOM05D007538 ORTHO05D009464 1.7e-78 297.0 286 60.8
Dinv25258 Davidia involucrata HOM05D007538 ORTHO05D009464 1.4e-75 287.3 297 57.2
Hma1.2p1_1569F.1_g291220 Hydrangea macrophylla HOM05D007538 ORTHO05D009464 9.3e-64 248.1 290 52.4
GSVIVG01013092001 Vitis vinifera HOM05D007538 ORTHO05D009464 3.8e-57 226.1 303 48.5
Cfa012515 Carpinus fangiana HOM05D007538 ORTHO05D009464 7.1e-56 221.9 347 45.8
QL12p001632 Quercus lobata HOM05D007538 ORTHO05D009464 6.7e-54 215.3 305 46.9
CiPaw.12G068100 Carya illinoinensis HOM05D007538 ORTHO05D009464 1.3e-52 211.1 310 46.8
Haze_08148 Corylus avellana HOM05D007538 ORTHO05D009464 2.1e-52 210.3 306 47.4
Thecc.03G310000 Theobroma cacao HOM05D007538 ORTHO05D009464 2.8e-52 209.9 310 44.2
MD06G1026300 Malus domestica HOM05D007538 ORTHO05D009464 1.0e-49 201.4 346 42.2
FAN08G1825 Fragaria x ananassa HOM05D007538 ORTHO05D009464 4.9e-49 199.1 306 43.5
FAN13G1023 Fragaria x ananassa HOM05D007538 ORTHO05D009464 1.1e-48 198.0 306 43.1
CANSAT21G1184 Cannabis sativa HOM05D007538 ORTHO05D009464 2.1e-47 193.7 306 40.8
TAR629G0149 Trochodendron aralioides HOM05D007538 ORTHO05D009464 2.1e-47 193.7 367 39.5
Duzib205G0978 Durio zibethinus HOM05D007538 ORTHO05D009464 4.6e-47 192.6 312 41.3
RcHm_v2.0_Chr7g0211801 Rosa chinensis HOM05D007538 ORTHO05D009464 1.0e-46 191.4 303 43.2
Gorai.008G224100 Gossypium raimondii HOM05D007538 ORTHO05D009464 2.3e-46 190.3 309 43.0
Gohir.D12G208500 Gossypium hirsutum HOM05D007538 ORTHO05D009464 3.3e-45 186.4 309 42.1
FAN18G3589 Fragaria x ananassa HOM05D007538 ORTHO05D009464 7.4e-45 185.3 306 42.5
FAN04G2865 Fragaria x ananassa HOM05D007538 ORTHO05D009464 9.7e-45 184.9 318 41.2
Potri.001G137000 Populus trichocarpa HOM05D007538 ORTHO05D009464 9.7e-45 184.9 318 42.5
FvH4_5g23080 Fragaria vesca HOM05D007538 ORTHO05D009464 2.8e-44 183.3 306 42.2
Gohir.A12G206200 Gossypium hirsutum HOM05D007538 ORTHO05D009464 1.4e-43 181.0 304 40.5
Ciclev10001787m.g Citrus clementina HOM05D007538 ORTHO05D009464 1.8e-43 180.6 326 39.9
Nitab4.5_0000529g0180 Nicotiana tabacum HOM05D007538 ORTHO05D009464 2.6e-42 176.8 287 42.5
Prupe.5G028100 Prunus persica HOM05D007538 ORTHO05D009464 3.4e-42 176.4 285 43.9
COL.COLO4_16943 Corchorus olitorius HOM05D007538 ORTHO05D009464 5.9e-42 175.6 307 40.7
AUR62007351 Chenopodium quinoa HOM05D007538 ORTHO05D009464 1.3e-41 174.5 344 38.1
Sabra01G0106100 Salix brachista HOM05D007538 ORTHO05D009464 2.9e-41 173.3 317 43.2
Nn1g00207 Nelumbo nucifera HOM05D007538 ORTHO05D009464 1.1e-40 171.4 313 40.6
TWI60G0985 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 1.9e-40 170.6 310 42.3
Aqoxy3G02177 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 4.6e-39 166.0 303 39.9
Lalb_Chr05g0215781 Lupinus albus HOM05D007538 ORTHO05D009464 1.0e-38 164.9 314 40.4
Peaxi162Scf00170g00623 Petunia axillaris HOM05D007538 ORTHO05D009464 2.3e-38 163.7 299 40.5
AUR62018643 Chenopodium quinoa HOM05D007538 ORTHO05D009464 3.9e-38 162.9 340 37.1
Nitab4.5_0000809g0070 Nicotiana tabacum HOM05D007538 ORTHO05D009464 5.1e-38 162.5 296 39.2
Lalb_Chr16g0381091 Lupinus albus HOM05D007538 ORTHO05D009464 6.7e-38 162.2 347 36.9
Atru.chr6.1522 Acer truncatum HOM05D007538 ORTHO05D009464 9.7e-37 158.3 269 41.6
Haze_08149 Corylus avellana HOM05D007538 ORTHO05D009464 4.8e-36 156.0 239 46.0
Glyma.09G207600 Glycine max HOM05D007538 ORTHO05D009464 6.3e-36 155.6 303 39.6
VMungo1215G0128 Vigna mungo HOM05D007538 ORTHO05D009464 1.1e-35 154.8 301 39.5
Lj2g0003780 Lotus japonicus HOM05D007538 ORTHO05D009464 1.4e-35 154.5 345 37.1
Phvul.002G136900 Phaseolus vulgaris HOM05D007538 ORTHO05D009464 3.1e-35 153.3 300 39.7
Eucgr.E00229 Eucalyptus grandis HOM05D007538 ORTHO05D009464 2.0e-34 150.6 349 36.1
PGR042G1771 Punica granatum HOM05D007538 ORTHO05D009464 7.7e-34 148.7 300 35.3
Hund14370 Selenicereus undatus HOM05D007538 ORTHO05D009464 7.7e-34 148.7 307 37.8
TPR.G19431 Trifolium pratense HOM05D007538 ORTHO05D009464 1.3e-33 147.9 302 37.4
CANSAT21G1947 Cannabis sativa HOM05D007538 ORTHO05D009464 1.7e-33 147.5 281 37.0
Oeu027088.1 Olea europaea HOM05D007538 ORTHO05D009464 2.2e-33 147.1 329 38.6
Sopen08g025010 Solanum pennellii HOM05D007538 ORTHO05D009464 3.8e-33 146.4 299 39.5
Solyc08g076430.3 Solanum lycopersicum HOM05D007538 ORTHO05D009464 1.1e-32 144.8 298 37.9
PGSC0003DMG400014793 Solanum tuberosum HOM05D007538 ORTHO05D009464 2.5e-32 143.7 298 39.6
Cc08_g03440 Coffea canephora HOM05D007538 ORTHO05D009464 5.5e-32 142.5 328 37.2
EL10Ac5g12015 Beta vulgaris HOM05D007538 ORTHO05D009464 7.9e-31 138.7 302 37.4
Psat0s3175g0080 Pisum sativum HOM05D007538 ORTHO05D009464 1.4e-30 137.9 291 38.8
DCAR_008224 Daucus carota HOM05D007538 ORTHO05D009464 5.1e-30 136.0 336 33.9
Glyma.01G014500 Glycine max HOM05D007538 ORTHO05D009464 8.8e-30 135.2 237 39.7
Medtr5g029310 Medicago truncatula HOM05D007538 ORTHO05D009464 2.6e-29 133.7 307 35.8
arahy.Tifrunner.gnm1.ann1.IVG2V7 Arachis hypogaea HOM05D007538 ORTHO05D009464 3.3e-29 133.3 350 34.3
arahy.Tifrunner.gnm1.ann1.UGGX0P Arachis hypogaea HOM05D007538 ORTHO05D009464 3.3e-29 133.3 350 34.3
TWI15G0751 Tripterygium wilfordii HOM05D007538 ORTHO05D009464 4.4e-29 132.9 283 39.6
Manes.17G017000 Manihot esculenta HOM05D007538 ORTHO05D009464 2.8e-28 130.2 335 34.9
Ca_25180_v3 Cicer arietinum L. HOM05D007538 ORTHO05D009464 4.8e-28 129.4 307 36.5
FAN18G1171 Fragaria x ananassa HOM05D007538 ORTHO05D009464 8.2e-28 128.6 302 35.8
Sc01g0007170 Simmondsia chinensis HOM05D007538 ORTHO05D009464 1.1e-27 128.3 233 38.2
SalBow6G3044 Salvia bowleyana HOM05D007538 ORTHO05D009464 5.3e-27 125.9 315 36.2
ECA240G2786 Erigeron canadensis HOM05D007538 ORTHO05D009464 7.0e-27 125.6 295 37.3
Migut.E00746 Erythranthe guttata HOM05D007538 ORTHO05D009464 7.0e-27 125.6 305 37.4
PSO063G5413 Papaver somniferum HOM05D007538 ORTHO05D009464 7.7e-26 122.1 308 34.7
ClCG10G001280 Citrullus lanatus HOM05D007538 ORTHO05D009464 1.3e-25 121.3 301 36.9
HanXRQChr03g0083271 Helianthus annuus HOM05D007538 ORTHO05D009464 1.3e-25 121.3 282 34.4
Sed0002033 Sechium edule HOM05D007538 ORTHO05D009464 1.7e-25 120.9 304 35.9
MSTRG.13737 Avicennia marina HOM05D007538 ORTHO05D009464 8.5e-25 118.6 334 34.1
Lsat_1_v5_gn_6_80020 Lactuca sativa HOM05D007538 ORTHO05D009464 5.5e-24 115.9 306 33.0
Ah.12g055490 Amaranthus hybridus HOM05D007538 ORTHO05D009464 9.4e-24 115.2 211 42.2
CsaV3_3G001350 Cucumis sativus L. HOM05D007538 ORTHO05D009464 2.3e-22 110.5 306 34.3
MELO3C013823.2 Cucumis melo HOM05D007538 ORTHO05D009464 8.8e-22 108.6 292 34.6
Cpa.g.sc208.8 Carica papaya HOM05D007538 ORTHO05D009464 9.7e-21 105.1 249 36.9
CAN.G1987.3 Capsicum annuum HOM05D007538 ORTHO05D009464 3.1e-19 100.1 278 34.5
unitig_22.g5510 Utricularia gibba HOM05D007538 ORTHO05D009464 3.8e-17 93.2 316 32.0
Os02g0697200 Oryza sativa ssp. japonica HOM05D007538 ORTHO05D009464 4.0e-14 83.2 334 26.3
SEGI_18774 Sequoiadendron giganteum HOM05D007538 ORTHO05D009464 8.8e-14 82.0 318 26.7
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 5.7e-13 79.3 282 29.8
Zm00001eb187890 Zea mays HOM05D007538 ORTHO05D009464 7.5e-13 79.0 324 28.4
Psat0s1646g0240 Pisum sativum HOM05D007538 ORTHO05D009464 9.7e-13 78.6 156 35.9
Aqoxy1G00983 Aquilegia oxysepala HOM05D007538 ORTHO05D009464 3.1e-11 73.6 172 34.9
MBI04_g44375_MAGBIO Magnolia biondii HOM05D007538 ORTHO05D009464 1.9e-08 64.3 144 35.4
HPP92_020896 Vanilla planifolia HOM05D007538 ORTHO05D009464 5.5e-08 62.8 292 27.7
Zm00001eb251400 Zea mays HOM05D007538 ORTHO05D009464 2.1e-07 60.8 286 28.7


User provided reference genes

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