Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00268 Vaccinium macrocarpon HOM05D000009 ORTHO05D426527 1.5e-123 447.2 460 100.0
vmacro00125 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 5.6e-17 93.2 227 72.2
vmacro00126 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.9e-13 80.9 73 64.4
Rhsim11G0026900 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.3e-13 79.3 346 58.7
CSS0029466 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.0e-10 72.4 50 78.0
CSS0040834 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 2.3e-10 71.2 74 60.8
CSS0030658 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 5.6e-09 66.6 50 72.0
QL11p004214 Quercus lobata HOM05D000009 ORTHO05D000008 6.2e-08 63.2 155 46.5
Rhsim06G0066400 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.4e-07 61.2 47 68.1
TPR.G3826 Trifolium pratense HOM05D000009 ORTHO05D000008 2.4e-07 61.2 48 66.7
CANSAT78G0944 Cannabis sativa HOM05D000009 ORTHO05D000008 3.1e-07 60.8 49 61.2
CAN.G404.59 Capsicum annuum HOM05D000009 ORTHO05D000008 3.1e-07 60.8 73 53.4
Rhsim01G0056900 Rhododendron simsii HOM05D000009 ORTHO05D000008 3.1e-07 60.8 48 62.5
Rhsim05G0073100 Rhododendron simsii HOM05D001155 ORTHO05D001080 4.0e-07 60.5 36 72.2
Rhsim01G0056600 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.2e-07 60.1 48 62.5
MBI19_g45011_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D030048 8.9e-07 59.3 161 33.5
Medtr3g020890 Medicago truncatula HOM05D000009 ORTHO05D000008 8.9e-07 59.3 47 63.8
Rhsim07G0066100 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.9e-07 59.3 101 65.3
RhsimUnG0036000 Rhododendron simsii HOM05D000009 ORTHO05D000008 8.9e-07 59.3 101 65.3
QL04p012365 Quercus lobata HOM05D000009 ORTHO05D000008 1.2e-06 58.9 42 73.8
Rhsim07G0069600 Rhododendron simsii HOM05D000009 ORTHO05D000008 1.5e-06 58.5 142 54.2
vmacro00072 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.5e-06 58.5 42 61.9
vmacro23306 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 1.5e-06 58.5 42 61.9
Atru.chr6.201 Acer truncatum HOM05D000009 ORTHO05D000008 2.0e-06 58.2 50 60.0
CANSAT78G1918 Cannabis sativa HOM05D000009 ORTHO05D000008 2.0e-06 58.2 48 58.3
Hma1.2p1_0801F.1_g220330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.0e-06 58.2 90 44.4
QL04p012950 Quercus lobata HOM05D000009 ORTHO05D000008 2.0e-06 58.2 45 68.9
Rhsim01G0058700 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.0e-06 58.2 50 58.0
Rhsim05G0016800 Rhododendron simsii HOM05D000009 ORTHO05D000008 2.6e-06 57.8 38 63.2
Sc06g0006530 Simmondsia chinensis HOM05D000009 ORTHO05D000008 2.6e-06 57.8 151 34.4
QL04p083795 Quercus lobata HOM05D000009 ORTHO05D000008 3.4e-06 57.4 47 66.0
CANSAT80G0488 Cannabis sativa HOM05D000009 ORTHO05D000008 4.4e-06 57.0 48 58.3
Ciclev10010187m.g Citrus clementina HOM05D000009 ORTHO05D015750 4.4e-06 57.0 147 49.0
Duzib128G1966 Durio zibethinus HOM05D000009 ORTHO05D000008 4.4e-06 57.0 50 56.0
ECA246G2805 Erigeron canadensis HOM05D000009 ORTHO05D000008 4.4e-06 57.0 42 66.7
CANSAT78G2139 Cannabis sativa HOM05D000009 ORTHO05D000008 5.8e-06 56.6 49 57.1
Dinv07041 Davidia involucrata HOM05D000009 ORTHO05D000008 5.8e-06 56.6 48 60.4
Dinv22019 Davidia involucrata HOM05D000009 ORTHO05D000008 5.8e-06 56.6 48 60.4
Hma1.2p1_1556F.1_g290560 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.8e-06 56.6 94 39.4
Rhsim01G0056500 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.8e-06 56.6 50 56.0
Rhsim01G0058300 Rhododendron simsii HOM05D000009 ORTHO05D000008 5.8e-06 56.6 145 29.7
TAR636G0085 Trochodendron aralioides HOM05D000009 ORTHO05D000008 5.8e-06 56.6 107 48.6
CSS0049170 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 7.6e-06 56.2 52 55.8
Rhsim01G0055800 Rhododendron simsii HOM05D000009 ORTHO05D000008 7.6e-06 56.2 147 51.7
arahy.Tifrunner.gnm1.ann1.G3725Q Arachis hypogaea HOM05D000009 ORTHO05D000008 9.9e-06 55.8 40 67.5
arahy.Tifrunner.gnm1.ann1.G3JJD2 Arachis hypogaea HOM05D000009 ORTHO05D000008 9.9e-06 55.8 41 68.3
arahy.Tifrunner.gnm1.ann1.MUV7N5 Arachis hypogaea HOM05D000009 ORTHO05D000008 9.9e-06 55.8 41 68.3
Hma1.2p1_0801F.1_g220240 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.9e-06 55.8 47 63.8
Hma1.2p1_0801F.1_g220310 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.9e-06 55.8 47 63.8
Hma1.2p1_2921F.1_g330360 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 9.9e-06 55.8 47 63.8
MBI13_g04774_MAGBIO Magnolia biondii HOM05D000009 ORTHO05D006588 9.9e-06 55.8 50 52.0
QL01p002759 Quercus lobata HOM05D000009 ORTHO05D000008 9.9e-06 55.8 45 64.4
PGSC0003DMG400005052 Solanum tuberosum HOM05D000009 ORTHO05D000008 9.9e-06 55.8 71 50.7
TWI15G0849 Tripterygium wilfordii HOM05D000009 ORTHO05D000008 9.9e-06 55.8 48 60.4


User provided reference genes

Program Settings