Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00217 Vaccinium macrocarpon HOM05D003683 ORTHO05D004143 3.6e-55 218.0 109 100.0
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 1.6e-26 122.9 99 71.7
CSS0019244 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 2.7e-26 122.1 101 73.3
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 4.5e-26 121.3 98 68.4
Rhsim11G0007500 Rhododendron simsii HOM05D003683 ORTHO05D004143 6.5e-25 117.5 95 70.5
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 2.1e-23 112.5 111 63.1
Actinidia14483 Actinidia chinensis HOM05D003683 ORTHO05D004143 2.8e-23 112.1 102 68.6
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 3.7e-20 101.7 99 64.6
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 5.4e-19 97.8 97 68.0
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 9.2e-19 97.1 99 62.6
GSVIVG01019925001 Vitis vinifera HOM05D003683 ORTHO05D004143 9.2e-19 97.1 98 65.3
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 2.7e-18 95.5 97 66.0
Peaxi162Scf00102g01336 Petunia axillaris HOM05D003683 ORTHO05D004143 7.8e-18 94.0 95 60.0
Actinidia02072 Actinidia chinensis HOM05D003683 ORTHO05D004143 2.5e-16 89.0 86 65.1
QL12p015617 Quercus lobata HOM05D003683 ORTHO05D004143 3.3e-16 88.6 98 58.2
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 5.6e-16 87.8 95 61.1
CiPaw.11G145300 Carya illinoinensis HOM05D003683 ORTHO05D004143 7.3e-16 87.4 87 64.4
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.3e-16 87.4 88 63.6
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 1.2e-15 86.7 96 58.3
Gohir.D03G159600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 2.1e-15 85.9 97 58.8
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 2.1e-15 85.9 100 59.0
Thecc.03G264300 Theobroma cacao HOM05D003683 ORTHO05D004143 4.7e-15 84.7 81 66.7
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 1.0e-14 83.6 87 62.1
Gorai.003G167900 Gossypium raimondii HOM05D003683 ORTHO05D004143 1.4e-14 83.2 97 57.7
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 1.4e-14 83.2 100 59.0
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 1.4e-14 83.2 100 58.0
COL.COLO4_23839 Corchorus olitorius HOM05D003683 ORTHO05D004143 2.3e-14 82.4 93 58.1
Sopen08g003530 Solanum pennellii HOM05D003683 ORTHO05D004143 2.3e-14 82.4 93 58.1
PGSC0003DMG400012487 Solanum tuberosum HOM05D003683 ORTHO05D004143 3.0e-14 82.0 97 56.7
TAR375G1063 Trochodendron aralioides HOM05D003683 ORTHO05D004143 4.0e-14 81.6 100 54.0
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 6.8e-14 80.9 97 55.7
Manes.01G071300 Manihot esculenta HOM05D003683 ORTHO05D004143 8.9e-14 80.5 95 56.8
Sed0004645 Sechium edule HOM05D003683 ORTHO05D004143 8.9e-14 80.5 97 54.6
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.2e-13 80.1 87 58.6
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.5e-13 79.7 87 60.9
Eucgr.E00491 Eucalyptus grandis HOM05D003683 ORTHO05D004143 2.0e-13 79.3 89 53.9
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 3.4e-13 78.6 94 53.2
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 3.4e-13 78.6 86 57.0
CsaV3_5G003580 Cucumis sativus L. HOM05D003683 ORTHO05D004143 4.4e-13 78.2 97 52.6
Sed0005281 Sechium edule HOM05D003683 ORTHO05D004143 4.4e-13 78.2 83 57.8
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 5.8e-13 77.8 97 52.6
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 5.8e-13 77.8 95 55.8
ClCG01G003480 Citrullus lanatus HOM05D003683 ORTHO05D004143 1.3e-12 76.6 97 53.6
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 1.3e-12 76.6 107 47.7
Gohir.A12G222400 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.7e-12 76.3 88 58.0
Sabra03G0081600 Salix brachista HOM05D003683 ORTHO05D004143 1.7e-12 76.3 86 54.7
Nitab4.5_0000439g0100 Nicotiana tabacum HOM05D003683 ORTHO05D004143 2.2e-12 75.9 99 51.5
Atru.chr9.1472 Acer truncatum HOM05D003683 ORTHO05D004143 2.9e-12 75.5 104 54.8
Cc08_g13490 Coffea canephora HOM05D003683 ORTHO05D004143 2.9e-12 75.5 81 58.0
Gorai.008G241000 Gossypium raimondii HOM05D003683 ORTHO05D004143 2.9e-12 75.5 98 55.1
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 3.7e-12 75.1 84 56.0
Sabra01G0087900 Salix brachista HOM05D003683 ORTHO05D004143 3.7e-12 75.1 90 56.7
Nitab4.5_0006122g0030 Nicotiana tabacum HOM05D003683 ORTHO05D004143 4.9e-12 74.7 99 51.5
Ciclev10023705m.g Citrus clementina HOM05D003683 ORTHO05D004143 1.1e-11 73.6 84 58.3
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 1.4e-11 73.2 92 52.2
TWI60G0451 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 1.9e-11 72.8 86 57.0
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 2.4e-11 72.4 95 52.6
Potri.001G114900 Populus trichocarpa HOM05D003683 ORTHO05D004143 2.4e-11 72.4 90 56.7
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 3.2e-11 72.0 97 51.5
PGR042G1830 Punica granatum HOM05D003683 ORTHO05D004143 3.2e-11 72.0 108 47.2
Gohir.D12G224900 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.0e-11 70.9 98 53.1
Lsat_1_v5_gn_6_10220 Lactuca sativa HOM05D003683 ORTHO05D004143 1.2e-10 70.1 100 49.0
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 2.0e-10 69.3 93 51.6
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 2.7e-10 68.9 100 50.0
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 2.7e-10 68.9 95 44.2
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 2.7e-10 68.9 102 46.1
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 2.7e-10 68.9 93 51.6
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 2.7e-10 68.9 93 51.6
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 2.7e-10 68.9 93 51.6
MSTRG.13795 Avicennia marina HOM05D003683 ORTHO05D004143 3.5e-10 68.6 93 52.7
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 4.6e-10 68.2 82 51.2
Hund14673 Selenicereus undatus HOM05D003683 ORTHO05D004143 6.0e-10 67.8 94 52.1
DCAR_008443 Daucus carota HOM05D003683 ORTHO05D004143 7.8e-10 67.4 69 59.4
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 7.8e-10 67.4 100 47.0
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.0e-09 67.0 92 50.0
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 1.0e-09 67.0 95 51.6
THA.LOC104814010 Tarenaya hassleriana HOM05D003683 ORTHO05D004143 1.0e-09 67.0 87 50.6
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.3e-09 66.6 96 50.0
Hund11555 Selenicereus undatus HOM05D003683 ORTHO05D004143 1.3e-09 66.6 71 57.7
EL10Ac5g12652 Beta vulgaris HOM05D003683 ORTHO05D004143 3.0e-09 65.5 86 48.8
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 3.0e-09 65.5 91 50.5
ECA233G3941 Erigeron canadensis HOM05D003683 ORTHO05D004143 3.9e-09 65.1 74 55.4
FAN01G1734 Fragaria x ananassa HOM05D003683 ORTHO05D004143 5.0e-09 64.7 91 49.5
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 6.6e-09 64.3 82 51.2
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 8.6e-09 63.9 92 47.8
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 1.1e-08 63.5 69 55.1
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 1.1e-08 63.5 69 55.1
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 1.1e-08 63.5 69 55.1
AUR62010534 Chenopodium quinoa HOM05D003683 ORTHO05D004143 1.1e-08 63.5 85 49.4
AUR62017361 Chenopodium quinoa HOM05D003683 ORTHO05D004143 1.5e-08 63.2 85 49.4
Migut.E01009 Erythranthe guttata HOM05D003683 ORTHO05D004143 1.9e-08 62.8 87 49.4
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 1.9e-08 62.8 80 52.5
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 2.5e-08 62.4 69 55.1
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 2.5e-08 62.4 70 57.1
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 3.3e-08 62.0 69 56.5
A03p25230 Brassica napus HOM05D003683 ORTHO05D004143 4.3e-08 61.6 69 55.1
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 4.3e-08 61.6 69 53.6
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 4.3e-08 61.6 69 53.6
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 4.3e-08 61.6 80 47.5
MD07G1124000 Malus domestica HOM05D003683 ORTHO05D004143 5.6e-08 61.2 92 47.8
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 7.3e-08 60.8 79 50.6
AL4G44620 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 9.5e-08 60.5 69 58.0
CARHR140640 Cardamine hirsuta HOM05D003683 ORTHO05D004143 9.5e-08 60.5 69 56.5
CsaV3_3G009560 Cucumis sativus L. HOM05D003683 ORTHO05D004143 9.5e-08 60.5 94 47.9
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 9.5e-08 60.5 72 52.8
PGSC0003DMG400012753 Solanum tuberosum HOM05D003683 ORTHO05D004143 9.5e-08 60.5 81 44.4
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 9.5e-08 60.5 88 54.5
Carub.0004s2806 Capsella rubella HOM05D003683 ORTHO05D004143 2.1e-07 59.3 69 56.5
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 2.1e-07 59.3 96 47.9
HanXRQChr09g0246651 Helianthus annuus HOM05D003683 ORTHO05D004143 2.8e-07 58.9 97 43.3
Solyc01g091490.3 Solanum lycopersicum HOM05D003683 ORTHO05D004143 2.8e-07 58.9 83 43.4
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 3.6e-07 58.5 99 42.4
MBI04_g32262_MAGBIO Magnolia biondii HOM05D003683 ORTHO05D004143 3.6e-07 58.5 82 47.6
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 3.6e-07 58.5 69 55.1
MD02G1201500 Malus domestica HOM05D003683 ORTHO05D004143 4.7e-07 58.2 94 50.0
AT2G45450 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 6.2e-07 57.8 69 55.1
BcaB02g08986 Brassica carinata HOM05D003683 ORTHO05D004143 6.2e-07 57.8 73 50.7
BcaB06g29422 Brassica carinata HOM05D003683 ORTHO05D004143 6.2e-07 57.8 69 52.2
TWI23G1078 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 6.2e-07 57.8 89 46.1
ATR0820G297 Amborella trichopoda HOM05D003360 ORTHO05D003759 8.0e-07 57.4 43 69.8
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 8.0e-07 57.4 78 46.2
SalBow6G6235 Salvia bowleyana HOM05D003683 ORTHO05D004143 8.0e-07 57.4 66 56.1
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.1e-06 57.0 61 54.1
BcaB01g03267 Brassica carinata HOM05D003683 ORTHO05D004143 1.4e-06 56.6 69 52.2
BcaC01g05122 Brassica carinata HOM05D003683 ORTHO05D004143 1.4e-06 56.6 69 53.6
BcaC01g05135 Brassica carinata HOM05D003683 ORTHO05D004143 1.4e-06 56.6 69 53.6
C03p30100 Brassica napus HOM05D003683 ORTHO05D004143 1.4e-06 56.6 69 53.6
MELO3C006178.2 Cucumis melo HOM05D003683 ORTHO05D004143 1.4e-06 56.6 69 53.6
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 1.4e-06 56.6 69 49.3
Medtr7g075120 Medicago truncatula HOM05D003683 ORTHO05D004143 1.4e-06 56.6 65 52.3
Cpa.g.sc29.63 Carica papaya HOM05D003683 ORTHO05D004143 1.8e-06 56.2 39 76.9
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 2.3e-06 55.8 93 40.9
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 2.3e-06 55.8 62 53.2
BcaB02g07396 Brassica carinata HOM05D003683 ORTHO05D004143 4.0e-06 55.1 81 46.9
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 4.0e-06 55.1 77 44.2
FAN02G1444 Fragaria x ananassa HOM05D003360 ORTHO05D003759 6.8e-06 54.3 56 58.9
A04p33850 Brassica napus HOM05D003683 ORTHO05D004143 8.9e-06 53.9 66 51.5
BraA04t18845Z Brassica rapa HOM05D003683 ORTHO05D004143 8.9e-06 53.9 66 51.5
Cc02_g36550 Coffea canephora HOM05D003683 ORTHO05D004143 8.9e-06 53.9 81 45.7


User provided reference genes

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