Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00200 Vaccinium macrocarpon HOM05D005642 ORTHO05D006672 0.0e+00 1459.9 751 100.0
Actinidia06420 Actinidia chinensis HOM05D005642 ORTHO05D006672 7.7e-133 478.8 779 44.8
Rhsim09G0061700 Rhododendron simsii HOM05D005642 ORTHO05D006672 8.0e-122 442.2 550 52.7
CSS0029793 Camellia sinensis var. sinensis HOM05D005642 ORTHO05D006672 1.0e-121 441.8 786 42.5
Dinv03494 Davidia involucrata HOM05D005642 ORTHO05D006672 1.3e-95 355.1 788 37.9
Hma1.2p1_0379F.1_g139820 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 1.7e-76 291.6 767 35.3
CiPaw.07G213400 Carya illinoinensis HOM05D005642 ORTHO05D006672 1.8e-73 281.6 819 32.8
QL12p025051 Quercus lobata HOM05D005642 ORTHO05D006672 4.2e-70 270.4 804 32.6
Hma1.2p1_0379F.1_g139825 Hydrangea macrophylla HOM05D005642 ORTHO05D006672 2.1e-66 258.1 588 37.1
Cfa013263 Carpinus fangiana HOM05D005642 ORTHO05D006672 5.3e-65 253.4 619 35.4
Ciclev10007752m.g Citrus clementina HOM05D005642 ORTHO05D006672 2.4e-62 244.6 804 31.2
Duzib168G1720 Durio zibethinus HOM05D005642 ORTHO05D006672 6.0e-61 240.0 792 30.4
Gorai.001G001600 Gossypium raimondii HOM05D005642 ORTHO05D006672 1.1e-54 219.2 791 30.2
Gohir.D07G001900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 5.5e-54 216.9 793 29.9
DCAR_004570 Daucus carota HOM05D005642 ORTHO05D006672 1.6e-53 215.3 771 30.6
TAR383G0661 Trochodendron aralioides HOM05D005642 ORTHO05D006672 2.7e-53 214.5 902 27.9
Haze_21725 Corylus avellana HOM05D005642 ORTHO05D006672 4.6e-53 213.8 721 30.0
Prupe.1G460900 Prunus persica HOM05D005642 ORTHO05D006672 1.8e-52 211.8 851 28.4
Gohir.A07G001500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.0e-52 211.1 788 29.7
Potri.006G275200 Populus trichocarpa HOM05D005642 ORTHO05D006672 3.0e-52 211.1 805 29.4
Manes.03G003300 Manihot esculenta HOM05D005642 ORTHO05D006672 1.1e-51 209.1 775 29.5
Potri.018G006200 Populus trichocarpa HOM05D005642 ORTHO05D006672 3.3e-51 207.6 805 29.3
COL.COLO4_19042 Corchorus olitorius HOM05D005642 ORTHO05D006672 8.2e-50 203.0 645 31.0
Rhsim09G0062600 Rhododendron simsii HOM05D005642 ORTHO05D006672 8.2e-50 203.0 165 73.3
Sabra18G0014300 Salix brachista HOM05D005642 ORTHO05D006672 2.4e-49 201.4 810 28.3
Medtr3g108780 Medicago truncatula HOM05D005642 ORTHO05D006672 5.3e-49 200.3 793 29.6
Cc11_g04340 Coffea canephora HOM05D005642 ORTHO05D006672 6.9e-49 199.9 776 29.9
Glyma.06G075900 Glycine max HOM05D005642 ORTHO05D006672 6.9e-49 199.9 798 28.1
MSTRG.25774 Avicennia marina HOM05D005642 ORTHO05D006672 2.0e-48 198.4 758 30.2
GSVIVG01035528001 Vitis vinifera HOM05D005642 ORTHO05D006672 1.0e-47 196.1 727 29.7
Oeu019279.2 Olea europaea HOM05D005642 ORTHO05D006672 1.7e-47 195.3 570 33.3
MD15G1108600 Malus domestica HOM05D005642 ORTHO05D006672 3.8e-47 194.1 814 27.8
ClCG05G017540 Citrullus lanatus HOM05D005642 ORTHO05D006672 6.5e-47 193.4 716 28.9
Psat5g024120 Pisum sativum HOM05D005642 ORTHO05D006672 6.5e-47 193.4 782 28.8
Sabra06G0213000 Salix brachista HOM05D005642 ORTHO05D006672 3.2e-46 191.0 850 27.4
Ca_15671_v3 Cicer arietinum L. HOM05D005642 ORTHO05D006672 7.2e-46 189.9 804 29.0
Thecc.09G006400 Theobroma cacao HOM05D005642 ORTHO05D006672 1.3e-44 185.7 454 33.9
VMungo1309G0073 Vigna mungo HOM05D005642 ORTHO05D006672 2.3e-44 184.9 801 27.7
SalBow8G4661 Salvia bowleyana HOM05D005642 ORTHO05D006672 6.7e-44 183.3 770 28.1
CsaV3_3G047060 Cucumis sativus L. HOM05D005642 ORTHO05D006672 1.9e-43 181.8 716 28.4
Lalb_Chr11g0064111 Lupinus albus HOM05D005642 ORTHO05D006672 5.7e-43 180.3 805 27.5
TWI63G0215 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 1.6e-42 178.7 757 29.5
Gorai.009G068300 Gossypium raimondii HOM05D005642 ORTHO05D006672 2.8e-42 177.9 600 31.2
Glyma.04G074900 Glycine max HOM05D005642 ORTHO05D006672 4.8e-42 177.2 587 29.3
Gohir.D05G067500 Gossypium hirsutum HOM05D005642 ORTHO05D006672 4.8e-42 177.2 757 28.7
Lalb_Chr23g0269061 Lupinus albus HOM05D005642 ORTHO05D006672 4.8e-42 177.2 764 26.8
Eucgr.C04006 Eucalyptus grandis HOM05D005642 ORTHO05D006672 5.3e-41 173.7 603 30.2
Gohir.A05G064900 Gossypium hirsutum HOM05D005642 ORTHO05D006672 3.4e-40 171.0 601 30.8
Migut.A00441 Erythranthe guttata HOM05D005642 ORTHO05D006672 4.5e-40 170.6 756 28.2
CANSAT78G0024 Cannabis sativa HOM05D005642 ORTHO05D006672 2.9e-39 167.9 753 28.0
Phvul.009G100600 Phaseolus vulgaris HOM05D005642 ORTHO05D006672 6.5e-39 166.8 805 27.2
arahy.Tifrunner.gnm1.ann1.4FD105 Arachis hypogaea HOM05D005642 ORTHO05D006672 2.7e-37 161.4 796 26.5
FAN27G2209 Fragaria x ananassa HOM05D005642 ORTHO05D006672 3.6e-37 161.0 790 27.0
Sed0007069 Sechium edule HOM05D005642 ORTHO05D006672 3.6e-37 161.0 711 28.1
TWI32G0776 Tripterygium wilfordii HOM05D005642 ORTHO05D006672 3.6e-37 161.0 811 27.0
Lj1g0005947 Lotus japonicus HOM05D005642 ORTHO05D006672 6.1e-37 160.2 798 26.6
THA.LOC104803598 Tarenaya hassleriana HOM05D005642 ORTHO05D006672 1.5e-35 155.6 785 26.6
SalBow4G3316 Salvia bowleyana HOM05D005642 ORTHO05D006672 2.0e-35 155.2 765 27.6
CAN.G673.14 Capsicum annuum HOM05D005642 ORTHO05D006672 4.4e-35 154.1 754 28.2
arahy.Tifrunner.gnm1.ann1.KDL0BF Arachis hypogaea HOM05D005642 ORTHO05D006672 1.1e-33 149.4 826 25.5
Peaxi162Scf00045g01740 Petunia axillaris HOM05D005642 ORTHO05D006672 4.1e-33 147.5 754 26.8
RcHm_v2.0_Chr6g0304881 Rosa chinensis HOM05D005642 ORTHO05D006672 4.1e-33 147.5 792 26.6
Atru.chr7.2633 Acer truncatum HOM05D005642 ORTHO05D006672 6.9e-33 146.7 393 32.1
Nn8g40457 Nelumbo nucifera HOM05D005642 ORTHO05D006672 2.0e-32 145.2 833 25.8
FvH4_2g36900 Fragaria vesca HOM05D005642 ORTHO05D006672 2.6e-32 144.8 791 26.4
PGR044G2675 Punica granatum HOM05D005642 ORTHO05D006672 5.9e-32 143.7 809 26.5
Thhalv10024763m.g Eutrema salsugineum HOM05D005642 ORTHO05D006672 1.7e-31 142.1 516 29.8
ECA246G0678 Erigeron canadensis HOM05D005642 ORTHO05D006672 4.2e-30 137.5 598 26.1
FAN15G2732 Fragaria x ananassa HOM05D005642 ORTHO05D006672 5.5e-30 137.1 795 25.4
AUR62009051 Chenopodium quinoa HOM05D005642 ORTHO05D006672 3.6e-29 134.4 545 26.8
A08p18620 Brassica napus HOM05D005642 ORTHO05D006672 4.7e-29 134.0 517 29.6
BraA08t33825Z Brassica rapa HOM05D005642 ORTHO05D006672 1.4e-28 132.5 517 29.8
FAN20G1085 Fragaria x ananassa HOM05D005642 ORTHO05D006672 1.4e-28 132.5 802 26.1
Sp7g29290 Schrenkiella parvula HOM05D005642 ORTHO05D006672 1.4e-28 132.5 736 26.2
SGA_v2.0_scaffold27G11668 Striga asiatica HOM05D005642 ORTHO05D006672 1.1e-27 129.4 737 26.5
BolC3t21109H Brassica oleracea HOM05D005642 ORTHO05D006672 2.0e-27 128.6 518 28.8
HanXRQChr17g0538601 Helianthus annuus HOM05D005642 ORTHO05D006672 3.3e-27 127.9 516 26.4
Sopen08g002430 Solanum pennellii HOM05D005642 ORTHO05D006672 5.7e-27 127.1 573 28.4
A01p06850 Brassica napus HOM05D005642 ORTHO05D006672 9.7e-27 126.3 499 28.7
BcaC01g01089 Brassica carinata HOM05D005642 ORTHO05D006672 3.7e-26 124.4 517 28.6
C03p87980 Brassica napus HOM05D005642 ORTHO05D006672 3.7e-26 124.4 517 28.6
BraA01t00636Z Brassica rapa HOM05D005642 ORTHO05D006672 4.8e-26 124.0 499 28.5
AUR62020612 Chenopodium quinoa HOM05D005642 ORTHO05D006672 6.3e-26 123.6 740 24.1
Solyc08g006480.3 Solanum lycopersicum HOM05D005642 ORTHO05D006672 6.3e-26 123.6 572 28.1
MD08G1130500 Malus domestica HOM05D005642 ORTHO05D006672 2.4e-25 121.7 586 26.6
MBI14_g08146_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 4.1e-25 120.9 666 27.3
PSO170G3270 Papaver somniferum HOM05D005642 ORTHO05D006672 4.1e-25 120.9 770 26.8
BolC1t00742H Brassica oleracea HOM05D005642 ORTHO05D006672 5.9e-24 117.1 499 27.9
Hund03285 Selenicereus undatus HOM05D005642 ORTHO05D006672 7.7e-24 116.7 743 26.0
MELO3C003630.2 Cucumis melo HOM05D005642 ORTHO05D006672 1.3e-23 115.9 476 27.9
Nitab4.5_0000555g0260 Nicotiana tabacum HOM05D005642 ORTHO05D006672 2.2e-23 115.2 535 27.9
MBI16_g31790_MAGBIO Magnolia biondii HOM05D005642 ORTHO05D006672 3.8e-23 114.4 769 26.8
Migut.E01422 Erythranthe guttata HOM05D005642 ORTHO05D006672 6.5e-23 113.6 726 25.9
BcaB03g12695 Brassica carinata HOM05D005642 ORTHO05D006672 8.5e-23 113.2 696 26.9
Carub.0007s0913 Capsella rubella HOM05D005642 ORTHO05D006672 1.9e-22 112.1 511 27.0
Aa31LG2G18900 Aethionema arabicum HOM05D005642 ORTHO05D006672 4.2e-22 110.9 499 26.9
Oeu014127.1 Olea europaea HOM05D005642 ORTHO05D006672 7.2e-22 110.2 479 28.4
Sc23g0006020 Simmondsia chinensis HOM05D005642 ORTHO05D006672 3.6e-21 107.8 555 25.6
BcaNung04578 Brassica carinata HOM05D005642 ORTHO05D006672 1.8e-20 105.5 516 26.6
CARHR239310 Cardamine hirsuta HOM05D005642 ORTHO05D006672 8.8e-20 103.2 791 25.0
PSO063G4833 Papaver somniferum HOM05D005642 ORTHO05D006672 1.2e-19 102.8 789 25.3
EL10Ac2g03740 Beta vulgaris HOM05D005642 ORTHO05D006672 3.3e-19 101.3 760 23.6
BcaC09g51922 Brassica carinata HOM05D005642 ORTHO05D006672 7.5e-19 100.1 754 23.5
BcaNung04589 Brassica carinata HOM05D005642 ORTHO05D006672 7.5e-19 100.1 663 24.1
C01p07620 Brassica napus HOM05D005642 ORTHO05D006672 7.5e-19 100.1 754 23.5
Aqoxy7G02962 Aquilegia oxysepala HOM05D005642 ORTHO05D006672 1.4e-17 95.9 789 24.3
Nitab4.5_0004131g0010 Nicotiana tabacum HOM05D005642 ORTHO05D006672 1.4e-17 95.9 770 24.0
Ah.11g043760 Amaranthus hybridus HOM05D005642 ORTHO05D006672 1.8e-17 95.5 499 24.4
Hund19402 Selenicereus undatus HOM05D005642 ORTHO05D006672 1.8e-17 95.5 549 27.0
Lsat_1_v5_gn_3_25461 Lactuca sativa HOM05D005642 ORTHO05D006672 4.1e-17 94.4 331 27.2
AL7G20630 Arabidopsis lyrata HOM05D005642 ORTHO05D006672 1.2e-16 92.8 784 24.5
Cpa.g.sc23.5 Carica papaya HOM05D005642 ORTHO05D006672 3.5e-16 91.3 287 30.7
SHI21128 Sapria himalayana HOM05D005642 ORTHO05D006672 5.9e-16 90.5 169 32.0
AT4G31430 Arabidopsis thaliana HOM05D005642 ORTHO05D006672 3.2e-14 84.7 676 23.8
BraA03t15110Z Brassica rapa HOM05D005642 ORTHO05D006672 9.4e-14 83.2 289 30.8
unitig_0.g2821 Utricularia gibba HOM05D005642 ORTHO05D006672 2.1e-13 82.0 341 31.1
CDE07G1180 Ceratophyllum demersum HOM05D005642 ORTHO05D006672 1.0e-12 79.7 145 35.2
unitig_747.g21903 Utricularia gibba HOM05D005642 ORTHO05D006672 3.0e-12 78.2 342 28.9
Atru.chr7.2632 Acer truncatum HOM05D005642 ORTHO05D006672 5.2e-12 77.4 243 30.5
Oeu048000.1 Olea europaea HOM05D005642 ORTHO05D006672 8.8e-12 76.6 119 41.2
CDE05G2573 Ceratophyllum demersum HOM05D006228 ORTHO05D007847 2.2e-10 72.0 538 23.2
MD00G1205700 Malus domestica HOM05D005642 ORTHO05D006672 8.3e-10 70.1 88 50.0
Lj7A752T55 Lonicera japonica HOM05D005642 ORTHO05D006672 2.4e-09 68.6 88 51.1
ECA240G1730 Erigeron canadensis HOM05D000542 ORTHO05D006672 5.4e-09 67.4 291 28.9
HPP92_015370 Vanilla planifolia HOM05D005642 ORTHO05D006672 1.2e-08 66.2 181 29.3
HanXRQChr13g0412371 Helianthus annuus HOM05D005642 ORTHO05D006672 3.5e-08 64.7 98 41.8
Zm00001eb067810 Zea mays HOM05D005642 ORTHO05D006672 4.5e-08 64.3 139 34.5
Zm00001eb432470 Zea mays HOM05D005642 ORTHO05D006672 1.0e-07 63.2 146 33.6
HanXRQChr03g0082481 Helianthus annuus HOM05D005642 ORTHO05D006672 1.7e-07 62.4 108 36.1
Lsat_1_v5_gn_5_61101 Lactuca sativa HOM05D005642 ORTHO05D006672 2.3e-07 62.0 89 42.7
Os04g0655600 Oryza sativa ssp. japonica HOM05D005642 ORTHO05D006672 2.3e-07 62.0 148 32.4


User provided reference genes

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