Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00191 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 3.4e-68 261.5 133 100.0
Rhsim01G0100800 Rhododendron simsii HOM05D005983 ORTHO05D007438 1.4e-50 203.0 129 82.2
Actinidia14415 Actinidia chinensis HOM05D005983 ORTHO05D007438 2.7e-49 198.7 129 76.0
Actinidia02144 Actinidia chinensis HOM05D005983 ORTHO05D007438 2.3e-48 195.7 129 73.6
Lj2A220G36 Lonicera japonica HOM05D005983 ORTHO05D007438 3.3e-47 191.8 127 74.0
Dinv21647 Davidia involucrata HOM05D005983 ORTHO05D007438 5.7e-47 191.0 129 72.9
CAN.G62.33 Capsicum annuum HOM05D005983 ORTHO05D007438 6.3e-46 187.6 129 69.8
QL12p011684 Quercus lobata HOM05D005983 ORTHO05D007438 3.1e-45 185.3 130 72.3
ECA233G1798 Erigeron canadensis HOM05D005983 ORTHO05D007438 5.3e-45 184.5 131 67.9
CSS0015193 Camellia sinensis var. sinensis HOM05D005983 ORTHO05D007438 7.0e-45 184.1 129 69.0
Sopen06g020900 Solanum pennellii HOM05D005983 ORTHO05D007438 7.0e-45 184.1 129 69.8
Duzib084G0278 Durio zibethinus HOM05D005983 ORTHO05D007438 9.1e-45 183.7 129 72.9
Solyc06g060780.4 Solanum lycopersicum HOM05D005983 ORTHO05D007438 9.1e-45 183.7 129 69.8
Cc08_g12250 Coffea canephora HOM05D005983 ORTHO05D007438 3.5e-44 181.8 129 69.8
PGSC0003DMG402011882 Solanum tuberosum HOM05D005983 ORTHO05D007438 3.5e-44 181.8 129 69.0
CiPaw.11G080800 Carya illinoinensis HOM05D005983 ORTHO05D007438 5.9e-44 181.0 131 70.2
Migut.A01119 Erythranthe guttata HOM05D005983 ORTHO05D007438 2.9e-43 178.7 119 72.3
Thecc.03G249100 Theobroma cacao HOM05D005983 ORTHO05D007438 2.9e-43 178.7 130 72.3
TWI15G0813 Tripterygium wilfordii HOM05D005983 ORTHO05D007438 2.9e-43 178.7 130 70.8
COL.COLO4_37146 Corchorus olitorius HOM05D005983 ORTHO05D007438 6.5e-43 177.6 129 70.5
MELO3C005523.2 Cucumis melo HOM05D005983 ORTHO05D007438 6.5e-43 177.6 129 67.4
AUR62007103 Chenopodium quinoa HOM05D005983 ORTHO05D007438 8.5e-43 177.2 129 63.6
Hma1.2p1_0316F.1_g122960 Hydrangea macrophylla HOM05D005983 ORTHO05D007438 8.5e-43 177.2 129 71.3
EL10Ac5g12377 Beta vulgaris HOM05D005983 ORTHO05D007438 1.1e-42 176.8 119 68.1
SalBow6G6019 Salvia bowleyana HOM05D005983 ORTHO05D007438 1.1e-42 176.8 127 68.5
AUR62019966 Chenopodium quinoa HOM05D005983 ORTHO05D007438 1.9e-42 176.0 129 64.3
Duzib205G1394 Durio zibethinus HOM05D005983 ORTHO05D007438 1.9e-42 176.0 119 72.3
Haze_01069 Corylus avellana HOM05D005983 ORTHO05D007438 2.5e-42 175.6 130 70.0
MBI04_g09520_MAGBIO Magnolia biondii HOM05D005983 ORTHO05D007438 2.5e-42 175.6 128 65.6
Nn1g00952 Nelumbo nucifera HOM05D005983 ORTHO05D007438 2.5e-42 175.6 130 65.4
Prupe.5G066800 Prunus persica HOM05D005983 ORTHO05D007438 2.5e-42 175.6 129 68.2
ClCG01G004150 Citrullus lanatus HOM05D005983 ORTHO05D007438 3.2e-42 175.3 120 68.3
CsaV3_5G004310 Cucumis sativus L. HOM05D005983 ORTHO05D007438 4.2e-42 174.9 129 67.4
Nitab4.5_0000618g0100 Nicotiana tabacum HOM05D005983 ORTHO05D007438 4.2e-42 174.9 129 67.4
Eucgr.E00410 Eucalyptus grandis HOM05D005983 ORTHO05D007438 5.5e-42 174.5 129 65.9
MD06G1055900 Malus domestica HOM05D005983 ORTHO05D007438 7.2e-42 174.1 129 69.8
Manes.01G082200 Manihot esculenta HOM05D005983 ORTHO05D007438 9.4e-42 173.7 132 67.4
Sabra03G0048600 Salix brachista HOM05D005983 ORTHO05D007438 9.4e-42 173.7 130 68.5
Gorai.003G172200 Gossypium raimondii HOM05D005983 ORTHO05D007438 1.6e-41 172.9 127 68.5
Ah.12g054210 Amaranthus hybridus HOM05D005983 ORTHO05D007438 2.1e-41 172.6 129 62.0
Peaxi162Scf01022g00324 Petunia axillaris HOM05D005983 ORTHO05D007438 2.7e-41 172.2 126 68.3
DCAR_004965 Daucus carota HOM05D005983 ORTHO05D007438 3.6e-41 171.8 129 65.9
Gohir.A03G007500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 3.6e-41 171.8 127 67.7
Lalb_Chr05g0214371 Lupinus albus HOM05D005983 ORTHO05D007438 3.6e-41 171.8 127 67.7
Aqoxy5G03845 Aquilegia oxysepala HOM05D005983 ORTHO05D007438 4.7e-41 171.4 129 65.1
AT4G16700 Arabidopsis thaliana HOM05D005983 ORTHO05D007438 6.1e-41 171.0 129 62.8
Ciclev10020120m.g Citrus clementina HOM05D005983 ORTHO05D007438 6.1e-41 171.0 131 66.4
Sp7g15340 Schrenkiella parvula HOM05D005983 ORTHO05D007438 2.3e-40 169.1 129 62.8
SGA_v2.0_scaffold104G30169 Striga asiatica HOM05D005983 ORTHO05D007438 2.3e-40 169.1 122 68.9
Glyma.01G207800 Glycine max HOM05D005983 ORTHO05D007438 3.0e-40 168.7 127 67.7
Glyma.11G034500 Glycine max HOM05D005983 ORTHO05D007438 3.9e-40 168.3 127 67.7
Potri.003G078300 Populus trichocarpa HOM05D005983 ORTHO05D007438 3.9e-40 168.3 131 66.4
AL7G38030 Arabidopsis lyrata HOM05D005983 ORTHO05D007438 5.2e-40 167.9 129 62.0
BcaC09g50403 Brassica carinata HOM05D005983 ORTHO05D007438 5.2e-40 167.9 129 62.0
C01p25880 Brassica napus HOM05D005983 ORTHO05D007438 5.2e-40 167.9 129 62.0
BolC1t02533H Brassica oleracea HOM05D005983 ORTHO05D007438 5.2e-40 167.9 129 62.0
Gohir.D03G163500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 5.2e-40 167.9 127 66.9
Carub.0007s2469 Capsella rubella HOM05D005983 ORTHO05D007438 8.8e-40 167.2 127 63.0
BcaNung00159 Brassica carinata HOM05D005983 ORTHO05D007438 1.1e-39 166.8 129 61.2
A01p20580 Brassica napus HOM05D005983 ORTHO05D007438 1.5e-39 166.4 129 61.2
BraA01t01986Z Brassica rapa HOM05D005983 ORTHO05D007438 1.5e-39 166.4 129 61.2
FAN08G1502 Fragaria x ananassa HOM05D005983 ORTHO05D007438 2.0e-39 166.0 129 65.9
arahy.Tifrunner.gnm1.ann1.NE97L5 Arachis hypogaea HOM05D005983 ORTHO05D007438 2.6e-39 165.6 129 65.1
CARHR223230 Cardamine hirsuta HOM05D005983 ORTHO05D007438 2.6e-39 165.6 129 60.5
Lj2g0002324 Lotus japonicus HOM05D005983 ORTHO05D007438 2.6e-39 165.6 117 66.7
Medtr5g012880 Medicago truncatula HOM05D005983 ORTHO05D007438 2.6e-39 165.6 127 63.8
unitig_744.g24471 Utricularia gibba HOM05D005983 ORTHO05D007438 3.3e-39 165.2 127 62.2
Ca_24588_v3 Cicer arietinum L. HOM05D005983 ORTHO05D007438 5.7e-39 164.5 126 64.3
VMungo1215G0088 Vigna mungo HOM05D005983 ORTHO05D007438 7.4e-39 164.1 127 64.6
Sed0010070 Sechium edule HOM05D005983 ORTHO05D007438 9.7e-39 163.7 128 64.8
Psat2g176840 Pisum sativum HOM05D005983 ORTHO05D007438 1.3e-38 163.3 127 63.0
HPP92_015120 Vanilla planifolia HOM05D005983 ORTHO05D007438 1.3e-38 163.3 118 67.8
Phvul.002G057200 Phaseolus vulgaris HOM05D005983 ORTHO05D007438 1.7e-38 162.9 127 63.8
Aa31LG2G12890 Aethionema arabicum HOM05D005983 ORTHO05D007438 3.7e-38 161.8 129 58.9
RcHm_v2.0_Chr7g0203641 Rosa chinensis HOM05D005983 ORTHO05D007438 3.7e-38 161.8 129 63.6
PGR042G2168 Punica granatum HOM05D005983 ORTHO05D007438 4.8e-38 161.4 130 63.8
CANSAT21G0098 Cannabis sativa HOM05D005983 ORTHO05D007438 8.2e-38 160.6 129 59.7
HanXRQChr16g0510961 Helianthus annuus HOM05D005983 ORTHO05D007438 8.2e-38 160.6 131 61.8
FAN04G1995 Fragaria x ananassa HOM05D005983 ORTHO05D007438 1.4e-37 159.8 126 65.1
Sed0018188 Sechium edule HOM05D005983 ORTHO05D007438 1.4e-37 159.8 128 64.1
FvH4_5g19150 Fragaria vesca HOM05D005983 ORTHO05D007438 2.4e-37 159.1 129 62.0
FAN18G0274 Fragaria x ananassa HOM05D005983 ORTHO05D007438 2.4e-37 159.1 129 62.0
PSO357G0330 Papaver somniferum HOM05D005983 ORTHO05D007438 5.3e-37 157.9 132 61.4
TPR.G18111 Trifolium pratense HOM05D005983 ORTHO05D007438 5.3e-37 157.9 127 60.6
Lsat_1_v5_gn_6_18021 Lactuca sativa HOM05D005983 ORTHO05D007438 7.0e-37 157.5 127 63.8
CDE04G1583 Ceratophyllum demersum HOM05D005983 ORTHO05D007438 7.7e-36 154.1 122 61.5
PSO170G1657 Papaver somniferum HOM05D005983 ORTHO05D007438 7.7e-36 154.1 132 59.8
GSVIVG01004724001 Vitis vinifera HOM05D005983 ORTHO05D007438 2.9e-35 152.1 129 61.2
Os03g0101900 Oryza sativa ssp. japonica HOM05D005983 ORTHO05D007438 2.5e-34 149.1 134 56.7
THA.LOC104815498 Tarenaya hassleriana HOM05D005983 ORTHO05D007438 7.2e-34 147.5 126 61.1
ATR0317G025 Amborella trichopoda HOM05D005983 ORTHO05D007438 6.8e-32 141.0 157 50.3
Hund14571 Selenicereus undatus HOM05D005983 ORTHO05D007438 1.2e-28 130.2 119 55.5
FAN13G0557 Fragaria x ananassa HOM05D005983 ORTHO05D007438 2.5e-26 122.5 95 64.2
Nitab4.5_0001076g0010 Nicotiana tabacum HOM05D005983 ORTHO05D007438 2.0e-23 112.8 68 76.5
Sc01g0008340 Simmondsia chinensis HOM05D005983 ORTHO05D007438 3.7e-22 108.6 78 65.4
Mapoly0144s0014 Marchantia polymorpha HOM05D005983 ORTHO05D007438 1.8e-21 106.3 133 47.4
Pp3c10_660 Physcomitrium patens HOM05D005983 ORTHO05D007438 3.1e-21 105.5 129 47.3
arahy.Tifrunner.gnm1.ann1.0NSC2B Arachis hypogaea HOM05D005983 ORTHO05D007438 4.5e-20 101.7 82 64.6
SEGI_40136 Sequoiadendron giganteum HOM05D005983 ORTHO05D007438 2.3e-19 99.4 99 52.5
CBR_g40206 Chara braunii HOM05D005983 ORTHO05D007438 2.9e-19 99.0 165 37.6
SMO351G0559 Selaginella moellendorffii HOM05D005983 ORTHO05D007438 3.3e-18 95.5 131 42.0
Atru.chr9.1290 Acer truncatum HOM05D005983 ORTHO05D007438 2.8e-17 92.4 65 70.8
PRCOL_00002495 Prasinoderma coloniale HOM05D000251 ORTHO05D007438 2.1e-09 66.2 115 41.7
BcaC02g09019 Brassica carinata HOM05D005983 ORTHO05D007438 3.6e-09 65.5 79 45.6
C04p39670 Brassica napus HOM05D005983 ORTHO05D007438 3.6e-09 65.5 79 45.6
C09p44540 Brassica napus HOM05D005983 ORTHO05D007438 3.6e-09 65.5 79 45.6
BolC4t25537H Brassica oleracea HOM05D005983 ORTHO05D007438 3.6e-09 65.5 79 45.6
Cfa023268 Carpinus fangiana HOM05D005983 ORTHO05D007438 1.0e-08 63.9 140 32.9
BcaC03g14715 Brassica carinata HOM05D005983 ORTHO05D007438 1.2e-07 60.5 75 44.0
C02p21550 Brassica napus HOM05D005983 ORTHO05D007438 1.2e-07 60.5 75 44.0
BolC2t08295H Brassica oleracea HOM05D005983 ORTHO05D007438 1.2e-07 60.5 75 44.0


User provided reference genes

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