Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00147 Vaccinium macrocarpon HOM05D000095 ORTHO05D000393 1.1e-75 286.6 153 100.0
vmacro00149 Vaccinium macrocarpon HOM05D000095 ORTHO05D000393 4.4e-35 151.8 114 80.7
Rhsim11G0044700 Rhododendron simsii HOM05D000095 ORTHO05D000393 1.3e-34 150.2 115 78.3
Actinidia01193 Actinidia chinensis HOM05D000095 ORTHO05D000393 1.5e-19 100.1 110 60.9
Actinidia30308 Actinidia chinensis HOM05D000095 ORTHO05D000393 1.3e-18 97.1 110 59.1
GSVIVG01015223001 Vitis vinifera HOM05D000095 ORTHO05D000393 1.3e-18 97.1 111 59.5
vmacro17222 Vaccinium macrocarpon HOM05D000095 ORTHO05D000393 3.7e-18 95.5 112 58.9
GSVIVG01035363001 Vitis vinifera HOM05D000095 ORTHO05D000393 4.9e-18 95.1 117 54.7
Duzib168G0176 Durio zibethinus HOM05D000095 ORTHO05D000393 1.4e-17 93.6 111 57.7
DCAR_011987 Daucus carota HOM05D000095 ORTHO05D000393 3.5e-16 89.0 116 50.0
Thecc.09G091800 Theobroma cacao HOM05D000095 ORTHO05D000393 3.5e-16 89.0 110 54.5
CSS0049647 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 4.6e-16 88.6 115 57.4
Hma1.2p1_0798F.1_g219700 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 6.0e-16 88.2 115 55.7
CiPaw.03G217700 Carya illinoinensis HOM05D000095 ORTHO05D000393 1.7e-15 86.7 110 55.5
Cc06_g11200 Coffea canephora HOM05D000095 ORTHO05D000393 1.7e-15 86.7 114 50.0
COL.COLO4_18219 Corchorus olitorius HOM05D000095 ORTHO05D000393 6.6e-15 84.7 120 55.8
Actinidia39724 Actinidia chinensis HOM05D000095 ORTHO05D000393 8.6e-15 84.3 110 57.3
Duzib187G1917 Durio zibethinus HOM05D000095 ORTHO05D000393 1.9e-14 83.2 110 54.5
Haze_25893 Corylus avellana HOM05D000095 ORTHO05D000393 2.5e-14 82.8 110 48.2
Lalb_Chr14g0375341 Lupinus albus HOM05D000095 ORTHO05D000393 2.5e-14 82.8 110 55.5
TAR624G0957 Trochodendron aralioides HOM05D000095 ORTHO05D000393 2.5e-14 82.8 111 52.3
Thecc.09G052900 Theobroma cacao HOM05D000095 ORTHO05D000393 9.5e-14 80.9 112 52.7
Gohir.A06G071500 Gossypium hirsutum HOM05D000095 ORTHO05D000393 1.2e-13 80.5 113 53.1
Hma1.2p1_0482F.1_g162580 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 1.6e-13 80.1 110 47.3
Nn8g38903 Nelumbo nucifera HOM05D000095 ORTHO05D000393 1.6e-13 80.1 113 52.2
Rhsim05G0022500 Rhododendron simsii HOM05D000095 ORTHO05D000393 1.6e-13 80.1 111 53.2
Glyma.05G222600 Glycine max HOM05D000095 ORTHO05D000393 2.1e-13 79.7 110 48.2
Nn6g35436 Nelumbo nucifera HOM05D000095 ORTHO05D000393 2.1e-13 79.7 113 52.2
QL02p062965 Quercus lobata HOM05D000095 ORTHO05D000393 2.1e-13 79.7 111 51.4
TAR626G0503 Trochodendron aralioides HOM05D000095 ORTHO05D000393 2.1e-13 79.7 111 48.6
Aqoxy7G01249 Aquilegia oxysepala HOM05D000095 ORTHO05D000393 4.7e-13 78.6 114 50.0
Dinv42304 Davidia involucrata HOM05D000095 ORTHO05D000393 8.1e-13 77.8 113 51.3
CSS0018279 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000393 1.1e-12 77.4 113 50.4
Manes.16G079600 Manihot esculenta HOM05D000095 ORTHO05D000393 1.1e-12 77.4 110 50.0
Eucgr.C03658 Eucalyptus grandis HOM05D000095 ORTHO05D000393 1.4e-12 77.0 116 50.0
Manes.03G032300 Manihot esculenta HOM05D000095 ORTHO05D000393 1.4e-12 77.0 112 46.4
Potri.006G150300 Populus trichocarpa HOM05D000095 ORTHO05D000393 1.8e-12 76.6 110 51.8
Phvul.002G304400 Phaseolus vulgaris HOM05D000095 ORTHO05D000393 2.3e-12 76.3 110 48.2
Migut.J00595 Erythranthe guttata HOM05D000095 ORTHO05D000393 3.1e-12 75.9 115 51.3
Glyma.08G029400 Glycine max HOM05D000095 ORTHO05D000393 3.1e-12 75.9 112 47.3
Lalb_Chr22g0349721 Lupinus albus HOM05D000095 ORTHO05D000393 4.0e-12 75.5 114 50.9
Sabra06G0119000 Salix brachista HOM05D000095 ORTHO05D000393 5.2e-12 75.1 110 51.8
TWI63G1838 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 5.2e-12 75.1 115 51.3
Psat1g048200 Pisum sativum HOM05D000095 ORTHO05D000393 6.8e-12 74.7 112 51.8
VMungo0251G3783 Vigna mungo HOM05D000095 ORTHO05D000393 6.8e-12 74.7 113 45.1
Gohir.D05G030700 Gossypium hirsutum HOM05D000095 ORTHO05D000393 8.9e-12 74.3 114 50.0
Gorai.009G030900 Gossypium raimondii HOM05D000095 ORTHO05D000393 8.9e-12 74.3 114 50.0
RcHm_v2.0_Chr2g0093071 Rosa chinensis HOM05D000095 ORTHO05D000393 1.2e-11 73.9 122 47.5
Dinv36752 Davidia involucrata HOM05D000095 ORTHO05D000393 1.5e-11 73.6 116 53.4
CiPaw.04G151500 Carya illinoinensis HOM05D000095 ORTHO05D000393 2.0e-11 73.2 102 51.0
Lj2g0026427 Lotus japonicus HOM05D000095 ORTHO05D000393 2.0e-11 73.2 111 52.3
Gorai.010G081800 Gossypium raimondii HOM05D000095 ORTHO05D000393 2.6e-11 72.8 114 48.2
Medtr6g092540 Medicago truncatula HOM05D000095 ORTHO05D000393 2.6e-11 72.8 111 50.5
TPR.G35497 Trifolium pratense HOM05D000095 ORTHO05D000393 2.6e-11 72.8 111 50.5
VMungo0464G1470 Vigna mungo HOM05D000095 ORTHO05D000393 2.6e-11 72.8 112 50.9
MSTRG.19526 Avicennia marina HOM05D000095 ORTHO05D000393 3.4e-11 72.4 114 52.6
FAN28G1723 Fragaria x ananassa HOM05D000095 ORTHO05D000393 3.4e-11 72.4 123 45.5
FvH4_1g07170 Fragaria vesca HOM05D000095 ORTHO05D000393 4.4e-11 72.0 123 45.5
Gohir.A05G029200 Gossypium hirsutum HOM05D000095 ORTHO05D000393 4.4e-11 72.0 114 49.1
Gohir.D06G070200 Gossypium hirsutum HOM05D000095 ORTHO05D000393 5.8e-11 71.6 113 47.8
HanXRQChr10g0319241 Helianthus annuus HOM05D000095 ORTHO05D000393 7.6e-11 71.2 121 47.9
TAR383G0327 Trochodendron aralioides HOM05D000095 ORTHO05D000393 7.6e-11 71.2 111 45.0
Nitab4.5_0000540g0280 Nicotiana tabacum HOM05D000095 ORTHO05D000393 9.9e-11 70.9 115 46.1
Eucgr.C00908 Eucalyptus grandis HOM05D000095 ORTHO05D000393 1.3e-10 70.5 119 46.2
Nitab4.5_0004456g0060 Nicotiana tabacum HOM05D000095 ORTHO05D000393 1.3e-10 70.5 122 44.3
Potri.006G230500 Populus trichocarpa HOM05D000095 ORTHO05D000393 1.3e-10 70.5 112 50.0
Prupe.7G212300 Prunus persica HOM05D000095 ORTHO05D000393 1.3e-10 70.5 123 45.5
TWI34G1719 Tripterygium wilfordii HOM05D000095 ORTHO05D000393 1.3e-10 70.5 114 48.2
Atru.chr7.1567 Acer truncatum HOM05D000095 ORTHO05D000393 1.7e-10 70.1 120 44.2
FAN26G0332 Fragaria x ananassa HOM05D000095 ORTHO05D000393 1.7e-10 70.1 123 44.7
FAN19G0808 Fragaria x ananassa HOM05D000095 ORTHO05D000393 2.2e-10 69.7 123 44.7
FAN26G2131 Fragaria x ananassa HOM05D000095 ORTHO05D000393 2.2e-10 69.7 123 44.7
Hma1.2p1_0800F.1_g220010 Hydrangea macrophylla HOM05D000095 ORTHO05D000393 2.2e-10 69.7 123 47.2
MD02G1076300 Malus domestica HOM05D000095 ORTHO05D000393 3.8e-10 68.9 129 44.2
Oeu034065.1 Olea europaea HOM05D000095 ORTHO05D000393 3.8e-10 68.9 113 48.7
Peaxi162Scf00498g00013 Petunia axillaris HOM05D000095 ORTHO05D000393 3.8e-10 68.9 132 46.2
MD15G1204700 Malus domestica HOM05D000095 ORTHO05D000393 4.9e-10 68.6 127 44.9
Lj4g0019928 Lotus japonicus HOM05D000095 ORTHO05D000393 6.4e-10 68.2 110 48.2
Nitab4.5_0011903g0010 Nicotiana tabacum HOM05D000095 ORTHO05D000393 6.4e-10 68.2 116 44.0
Manes.16G103300 Manihot esculenta HOM05D000095 ORTHO05D000393 1.4e-09 67.0 110 46.4
Nitab4.5_0000713g0070 Nicotiana tabacum HOM05D000095 ORTHO05D000393 1.4e-09 67.0 76 55.3
Solyc07g026680.2 Solanum lycopersicum HOM05D000095 ORTHO05D000393 1.9e-09 66.6 123 45.5
Lalb_Chr16g0390931 Lupinus albus HOM05D000095 ORTHO05D000393 4.1e-09 65.5 110 44.5
Lj8A543G14 Lonicera japonica HOM05D000095 ORTHO05D000393 5.4e-09 65.1 130 42.3
Lj8A548G14 Lonicera japonica HOM05D000095 ORTHO05D000393 5.4e-09 65.1 130 42.3
Peaxi162Scf00136g00115 Petunia axillaris HOM05D000095 ORTHO05D000393 5.4e-09 65.1 125 43.2
FAN23G1718 Fragaria x ananassa HOM05D000095 ORTHO05D000393 7.1e-09 64.7 121 41.3
Ciclev10009011m.g Citrus clementina HOM05D000095 ORTHO05D000393 9.2e-09 64.3 124 41.1
Atru.chr7.1051 Acer truncatum HOM05D000095 ORTHO05D000393 1.2e-08 63.9 113 43.4
Actinidia25262 Actinidia chinensis HOM05D000095 ORTHO05D000393 2.7e-08 62.8 110 46.4
QL02p001345 Quercus lobata HOM05D000095 ORTHO05D000393 2.7e-08 62.8 110 47.3
MBI01_g02254_MAGBIO Magnolia biondii HOM05D000095 ORTHO05D000393 3.5e-08 62.4 114 42.1
Os05g0195700 Oryza sativa ssp. japonica HOM05D000095 ORTHO05D000393 3.5e-08 62.4 133 41.4
Solyc12g008800.3 Solanum lycopersicum HOM05D000095 ORTHO05D000393 3.5e-08 62.4 121 45.5
Oeu024588.1 Olea europaea HOM05D000095 ORTHO05D000393 6.0e-08 61.6 113 45.1
Sopen12g003730 Solanum pennellii HOM05D000095 ORTHO05D000393 6.0e-08 61.6 119 47.1
Cc08_g10500 Coffea canephora HOM05D000095 ORTHO05D000393 1.0e-07 60.8 110 43.6
PGSC0003DMG400000340 Solanum tuberosum HOM05D000095 ORTHO05D000393 1.3e-07 60.5 119 41.2
Lj7P673T48 Lonicera japonica HOM05D000095 ORTHO05D000393 1.7e-07 60.1 129 44.2
Sed0016361 Sechium edule HOM05D000095 ORTHO05D000393 2.3e-07 59.7 110 38.2
Lsat_1_v5_gn_5_145621 Lactuca sativa HOM05D000095 ORTHO05D000393 3.0e-07 59.3 114 44.7
Nitab4.5_0001584g0120 Nicotiana tabacum HOM05D000095 ORTHO05D000393 3.0e-07 59.3 124 41.9
PSO210G6553 Papaver somniferum HOM05D000095 ORTHO05D000393 3.0e-07 59.3 131 38.2
Phvul.004G171200 Phaseolus vulgaris HOM05D000095 ORTHO05D000393 3.0e-07 59.3 112 46.4
BolC3t13978H Brassica oleracea HOM05D000095 ORTHO05D000393 5.1e-07 58.5 119 40.3
ECA234G2422 Erigeron canadensis HOM05D000095 ORTHO05D000393 5.1e-07 58.5 141 39.0
PSO210G3938 Papaver somniferum HOM05D000095 ORTHO05D000393 5.1e-07 58.5 131 38.2
Glyma.14G093800 Glycine max HOM05D000095 ORTHO05D000393 6.6e-07 58.2 108 45.4
MSTRG.10571 Avicennia marina HOM05D000095 ORTHO05D000393 1.1e-06 57.4 116 47.4
Ciclev10009128m.g Citrus clementina HOM05D000095 ORTHO05D000393 1.1e-06 57.4 123 42.3
Thhalv10014394m.g Eutrema salsugineum HOM05D000095 ORTHO05D000393 1.1e-06 57.4 112 42.0
HPP92_005554 Vanilla planifolia HOM05D000095 ORTHO05D000393 1.5e-06 57.0 116 37.1
A10p14130 Brassica napus HOM05D000095 ORTHO05D000393 1.9e-06 56.6 113 39.8
BraA10t43505Z Brassica rapa HOM05D000095 ORTHO05D000393 2.5e-06 56.2 113 39.8
Sed0018412 Sechium edule HOM05D000095 ORTHO05D000393 3.3e-06 55.8 116 44.0
BcaB08g36052 Brassica carinata HOM05D000095 ORTHO05D000393 4.3e-06 55.5 113 39.8
Sed0007074 Sechium edule HOM05D000095 ORTHO05D000393 5.6e-06 55.1 111 39.6
C09p48440 Brassica napus HOM05D000095 ORTHO05D000393 7.3e-06 54.7 116 38.8
Cfa003107 Carpinus fangiana HOM05D000095 ORTHO05D000393 7.3e-06 54.7 138 38.4
Glyma.04G051000 Glycine max HOM05D000095 ORTHO05D000393 7.3e-06 54.7 115 42.6
Hund19463 Selenicereus undatus HOM05D000095 ORTHO05D000393 7.3e-06 54.7 117 42.7
CAN.G1241.19 Capsicum annuum HOM05D000095 ORTHO05D000393 9.6e-06 54.3 125 41.6


User provided reference genes

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