Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.5e-81 306.2 164 100.0
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.2e-33 147.1 153 60.1
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 4.9e-32 141.7 153 60.1
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 1.1e-28 130.6 153 54.2
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 5.6e-28 128.3 152 53.3
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 9.5e-28 127.5 154 54.5
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 4.7e-27 125.2 153 51.6
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 4.7e-27 125.2 164 50.6
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 5.2e-26 121.7 161 50.3
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 6.8e-26 121.3 76 84.2
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.2e-25 120.6 153 49.0
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.2e-25 120.6 145 52.4
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.0e-25 119.8 147 52.4
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 2.6e-25 119.4 155 47.7
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 2.6e-25 119.4 155 51.6
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 4.4e-25 118.6 147 52.4
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.8e-25 118.2 145 53.1
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.8e-25 118.2 145 53.1
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.8e-25 118.2 153 51.6
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.8e-25 118.2 145 51.7
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 9.9e-25 117.5 141 52.5
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 9.9e-25 117.5 143 51.0
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 9.9e-25 117.5 147 51.7
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 1.3e-24 117.1 153 49.7
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.3e-24 117.1 76 81.6
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 1.7e-24 116.7 147 51.7
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.7e-24 116.7 149 51.0
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 1.7e-24 116.7 76 82.9
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 3.7e-24 115.5 142 53.5
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 6.4e-24 114.8 154 51.9
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 8.3e-24 114.4 145 53.1
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.1e-23 114.0 142 53.5
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.4e-23 113.6 145 49.7
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.9e-23 113.2 76 80.3
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 2.4e-23 112.8 143 51.7
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 3.2e-23 112.5 117 59.0
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 3.2e-23 112.5 149 50.3
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 4.1e-23 112.1 76 78.9
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 5.4e-23 111.7 117 58.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 7.1e-23 111.3 122 57.4
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 9.2e-23 110.9 149 49.0
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.2e-22 110.5 149 48.3
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.2e-22 110.5 149 48.3
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.2e-22 110.5 153 49.0
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 1.2e-22 110.5 76 76.3
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 1.6e-22 110.2 76 77.6
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.6e-22 110.2 76 76.3
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.6e-22 110.2 76 76.3
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.6e-22 110.2 163 47.2
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.6e-22 110.2 153 45.8
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 2.1e-22 109.8 76 80.3
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 2.1e-22 109.8 76 76.3
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 2.1e-22 109.8 76 77.6
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 2.7e-22 109.4 155 47.7
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.7e-22 109.4 146 50.7
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 3.5e-22 109.0 148 50.7
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 3.5e-22 109.0 76 76.3
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 4.6e-22 108.6 147 49.7
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.6e-22 108.6 76 73.7
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 6.0e-22 108.2 76 75.0
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 6.0e-22 108.2 164 45.7
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 7.8e-22 107.8 76 75.0
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 7.8e-22 107.8 152 46.7
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 7.8e-22 107.8 76 75.0
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 7.8e-22 107.8 76 75.0
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 1.3e-21 107.1 76 75.0
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.7e-21 106.7 76 71.1
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 2.3e-21 106.3 76 72.4
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 3.0e-21 105.9 117 55.6
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 3.0e-21 105.9 76 72.4
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 3.0e-21 105.9 76 71.1
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 3.0e-21 105.9 149 46.3
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.0e-21 105.9 76 71.1
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 3.9e-21 105.5 76 72.4
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 3.9e-21 105.5 117 56.4
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 5.1e-21 105.1 75 73.3
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 5.1e-21 105.1 117 56.4
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 5.1e-21 105.1 75 70.7
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 6.6e-21 104.8 76 68.4
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 6.6e-21 104.8 149 49.0
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 8.6e-21 104.4 76 68.4
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 8.6e-21 104.4 150 49.3
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.6e-21 104.4 117 54.7
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 8.6e-21 104.4 117 54.7
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 2.5e-20 102.8 70 75.7
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 2.5e-20 102.8 76 68.4
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.5e-20 102.8 76 68.4
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.5e-20 102.8 76 68.4
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 2.5e-20 102.8 76 68.4
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 2.5e-20 102.8 76 68.4
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 2.5e-20 102.8 76 69.7
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 3.3e-20 102.4 76 67.1
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 4.3e-20 102.1 71 71.8
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 4.3e-20 102.1 133 48.9
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 5.6e-20 101.7 120 53.3
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 5.6e-20 101.7 117 52.1
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 7.3e-20 101.3 75 70.7
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.2e-19 100.5 71 74.6
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.6e-19 100.1 151 44.4
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 2.1e-19 99.8 142 46.5
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 2.1e-19 99.8 76 65.8
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 4.7e-19 98.6 76 69.7
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 4.7e-19 98.6 76 69.7
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 6.2e-19 98.2 76 68.4
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 8.1e-19 97.8 76 68.4
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 1.1e-18 97.4 103 58.3
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 1.1e-18 97.4 75 69.3
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.4e-18 97.1 67 73.1
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.4e-18 97.1 70 70.0
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.2e-17 94.0 75 64.0
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.2e-17 94.0 75 64.0
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.0e-17 93.2 139 46.8
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.7e-16 90.1 75 64.0
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 4.6e-14 82.0 65 67.7
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 3.4e-09 65.9 130 39.2
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.1e-07 60.8 39 74.4
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.9e-07 60.1 99 44.4
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.4e-07 59.7 99 44.4


User provided reference genes

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