Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 2.4e-146 522.3 299 100.0
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 2.3e-120 436.0 304 85.2
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 3.7e-110 402.1 297 79.8
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 1.4e-109 400.2 298 78.9
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 8.2e-102 374.4 302 74.5
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 2.2e-94 349.7 306 69.6
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 1.8e-93 346.7 310 66.5
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 1.8e-88 330.1 305 64.9
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 1.1e-87 327.4 303 69.0
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 7.4e-87 324.7 307 65.8
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.7e-86 323.6 306 64.4
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.1e-85 320.9 307 63.2
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 2.4e-85 319.7 293 65.5
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 2.4e-85 319.7 306 64.1
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 5.3e-85 318.5 307 63.2
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 6.9e-85 318.2 293 67.2
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 2.9e-83 312.8 305 62.0
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 5.0e-83 312.0 293 65.5
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 8.5e-83 311.2 304 63.5
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 2.5e-82 309.7 304 61.8
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 3.2e-82 309.3 303 61.1
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 5.5e-82 308.5 303 61.4
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 7.2e-82 308.1 299 61.5
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.2e-81 307.4 305 60.3
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.2e-81 307.4 299 62.2
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.7e-81 306.2 304 61.5
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 3.0e-80 302.8 304 61.2
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 3.0e-80 302.8 289 65.1
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 5.1e-80 302.0 305 62.0
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 7.4e-79 298.1 293 62.5
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 1.3e-78 297.4 296 62.5
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 6.3e-78 295.0 288 63.2
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 8.2e-78 294.7 296 61.8
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 8.2e-78 294.7 300 63.0
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.4e-77 293.9 291 60.8
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 2.4e-77 293.1 290 60.3
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 4.1e-77 292.4 295 62.0
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 9.1e-77 291.2 257 66.9
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 9.1e-77 291.2 291 61.2
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 1.7e-75 287.0 298 59.4
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 2.1e-73 280.0 307 55.7
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 2.7e-73 279.6 305 60.3
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 4.7e-73 278.9 319 58.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.4e-72 277.3 288 62.2
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 1.4e-72 277.3 307 61.6
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.9e-72 275.8 285 63.9
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 6.7e-72 275.0 324 59.3
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 8.8e-72 274.6 309 58.3
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 4.4e-71 272.3 289 56.7
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 1.7e-70 270.4 299 60.2
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 6.3e-70 268.5 256 64.8
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 6.3e-70 268.5 298 56.7
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.6e-68 263.8 292 59.6
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 5.9e-68 261.9 283 60.4
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 5.0e-67 258.8 298 55.4
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 7.2e-66 255.0 285 57.5
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 1.4e-64 250.8 277 60.3
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 1.7e-62 243.8 304 55.9
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 2.2e-62 243.4 324 53.1
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 2.2e-62 243.4 324 53.1
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 6.5e-59 231.9 254 57.5
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.9e-58 230.3 262 57.6
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 1.2e-57 227.6 305 49.8
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 1.6e-57 227.3 271 55.7
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 1.6e-57 227.3 234 60.7
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 4.7e-57 225.7 288 53.5
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 8.0e-57 224.9 305 51.8
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.0e-56 224.6 258 52.3
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 1.7e-54 217.2 270 50.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 2.2e-54 216.9 289 49.1
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.8e-53 213.8 226 57.5
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 5.4e-53 212.2 258 46.9
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 4.5e-52 209.1 224 60.3
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.7e-51 207.2 258 50.0
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 1.9e-50 203.8 232 52.2
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 7.2e-50 201.8 294 48.0
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 2.1e-49 200.3 308 47.1
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 3.6e-49 199.5 287 49.5
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 6.1e-49 198.7 290 47.2
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 1.4e-48 197.6 285 49.5
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 8.9e-48 194.9 288 47.6
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 1.5e-47 194.1 289 47.1
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 5.7e-47 192.2 306 47.1
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 7.5e-47 191.8 288 46.5
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 9.8e-47 191.4 205 55.1
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 2.2e-46 190.3 289 47.1
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 2.8e-46 189.9 291 46.4
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 2.8e-46 189.9 291 46.4
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 3.7e-46 189.5 289 46.7
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 8.3e-46 188.3 291 46.0
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 1.4e-45 187.6 212 53.3
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 2.4e-45 186.8 290 47.9
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 4.1e-45 186.0 261 53.3
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 8.6e-43 178.3 219 58.9
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.5e-42 177.6 266 45.9
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 1.0e-40 171.4 246 48.0
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 2.6e-39 166.8 253 54.5
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 1.3e-38 164.5 218 49.1
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 7.0e-37 158.7 249 43.8
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 1.0e-35 154.8 189 45.0
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 2.5e-34 150.2 255 45.5
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 3.3e-34 149.8 186 46.2
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 6.0e-28 129.0 78 88.5
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 3.1e-24 116.7 263 36.9
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 5.8e-23 112.5 131 46.6
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 2.7e-20 103.6 276 33.3
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 4.6e-20 102.8 298 34.6
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 8.9e-16 88.6 76 64.5
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 2.6e-15 87.0 233 32.6
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 4.4e-15 86.3 322 36.6
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 3.8e-14 83.2 152 37.5
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 4.9e-14 82.8 272 33.8
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 5.4e-13 79.3 286 35.7
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 7.1e-13 79.0 88 62.5
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 2.1e-12 77.4 178 41.6
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 7.8e-12 75.5 237 32.9
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.0e-11 75.1 70 51.4
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 4.3e-10 69.7 229 33.2
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 6.9e-08 62.4 295 30.8


User provided reference genes

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