Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 8.1e-74 280.4 151 100.0
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.1e-30 137.1 125 61.6
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 1.1e-30 137.1 130 62.3
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 2.5e-30 136.0 126 65.9
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 4.4e-27 125.2 124 58.1
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 4.4e-27 125.2 124 58.1
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 9.7e-27 124.0 129 61.2
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 2.2e-26 122.9 123 61.8
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 2.8e-26 122.5 157 48.4
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 4.8e-26 121.7 122 58.2
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 1.1e-25 120.6 125 60.0
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 1.4e-25 120.2 128 60.2
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.4e-25 120.2 128 60.2
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.4e-25 120.2 137 55.5
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.4e-25 120.2 124 55.6
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 3.1e-25 119.0 105 61.9
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 3.1e-25 119.0 127 53.5
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 4.1e-25 118.6 127 58.3
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 4.1e-25 118.6 131 57.3
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 6.9e-25 117.9 130 58.5
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 6.9e-25 117.9 130 58.5
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.6e-24 115.9 132 55.3
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 2.6e-24 115.9 125 53.6
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 3.4e-24 115.5 102 68.6
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 4.5e-24 115.2 128 56.2
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 4.5e-24 115.2 97 66.0
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 4.5e-24 115.2 131 55.7
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 5.9e-24 114.8 134 55.2
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 7.7e-24 114.4 134 55.2
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 7.7e-24 114.4 128 53.9
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 7.7e-24 114.4 104 61.5
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.0e-23 114.0 127 54.3
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 1.0e-23 114.0 126 56.3
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 1.7e-23 113.2 130 56.9
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 1.7e-23 113.2 127 54.3
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 2.9e-23 112.5 128 53.9
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 8.5e-23 110.9 133 56.4
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 8.5e-23 110.9 127 52.8
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.1e-22 110.5 129 56.6
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.1e-22 110.5 127 53.5
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.1e-22 110.5 108 59.3
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 1.4e-22 110.2 129 58.1
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.9e-22 109.8 125 53.6
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 1.9e-22 109.8 132 52.3
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 2.5e-22 109.4 125 52.8
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 2.5e-22 109.4 127 51.2
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 3.2e-22 109.0 135 48.9
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 3.2e-22 109.0 127 54.3
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 4.2e-22 108.6 126 53.2
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 4.2e-22 108.6 126 55.6
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 5.5e-22 108.2 106 60.4
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 5.5e-22 108.2 127 53.5
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 5.5e-22 108.2 131 54.2
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 7.2e-22 107.8 125 53.6
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 9.4e-22 107.5 127 50.4
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 9.4e-22 107.5 126 50.0
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 9.4e-22 107.5 134 50.0
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.2e-21 107.1 117 55.6
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.2e-21 107.1 127 54.3
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.2e-21 107.1 105 56.2
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.6e-21 106.7 121 57.0
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 1.6e-21 106.7 125 52.8
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 2.1e-21 106.3 120 55.0
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 3.6e-21 105.5 126 50.0
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 3.6e-21 105.5 126 50.0
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 6.1e-21 104.8 126 54.8
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 6.1e-21 104.8 124 50.0
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 6.1e-21 104.8 150 48.7
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 6.1e-21 104.8 133 51.9
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 6.1e-21 104.8 127 58.3
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 7.9e-21 104.4 125 49.6
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 7.9e-21 104.4 76 71.1
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 7.9e-21 104.4 133 51.1
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 1.0e-20 104.0 125 52.8
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.0e-20 104.0 101 55.4
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.0e-20 104.0 73 75.3
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.0e-20 104.0 73 75.3
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 2.3e-20 102.8 128 50.8
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 3.0e-20 102.4 105 57.1
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 5.2e-20 101.7 125 48.8
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 5.2e-20 101.7 125 48.0
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 6.7e-20 101.3 125 48.0
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 6.7e-20 101.3 86 65.1
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 6.7e-20 101.3 82 67.1
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 8.8e-20 100.9 108 54.6
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 8.8e-20 100.9 127 55.1
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 8.8e-20 100.9 127 56.7
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 8.8e-20 100.9 132 52.3
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 1.1e-19 100.5 107 55.1
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 1.5e-19 100.1 127 50.4
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 2.0e-19 99.8 125 48.8
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 2.0e-19 99.8 125 47.2
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 2.6e-19 99.4 101 57.4
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 4.4e-19 98.6 136 50.7
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 7.4e-19 97.8 129 47.3
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 1.1e-17 94.0 126 54.0
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 1.4e-17 93.6 130 50.8
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.4e-17 93.6 88 56.8
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 1.4e-17 93.6 141 47.5
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 5.3e-17 91.7 126 53.2
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 1.2e-16 90.5 111 51.4
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 1.6e-16 90.1 125 47.2
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 2.9e-15 85.9 109 53.2
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 3.2e-14 82.4 84 53.6
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.4e-12 77.0 131 45.0
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 2.3e-12 76.3 70 55.7
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 3.0e-12 75.9 131 44.3
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.6e-11 72.8 73 58.9
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 7.7e-08 61.2 123 39.8
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 9.4e-06 54.3 95 42.1


User provided reference genes

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