Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 3.3e-94 348.6 207 100.0
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 1.0e-55 220.7 196 70.9
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 1.8e-55 219.9 201 69.2
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 1.8e-55 219.9 209 69.9
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 7.5e-54 214.5 209 68.4
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 8.3e-53 211.1 199 60.8
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 1.2e-51 207.2 200 64.5
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 3.5e-51 205.7 195 65.6
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 3.5e-51 205.7 196 67.9
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 3.5e-51 205.7 194 65.5
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 7.7e-51 204.5 204 65.7
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 1.7e-50 203.4 194 62.9
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 2.3e-50 203.0 196 64.3
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 2.3e-50 203.0 194 66.5
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 3.8e-50 202.2 193 68.4
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 5.0e-50 201.8 195 65.6
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 6.5e-50 201.4 196 66.8
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 8.6e-50 201.1 194 63.4
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 1.1e-49 200.7 195 65.1
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 1.5e-49 200.3 196 64.3
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 3.3e-49 199.1 196 65.8
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 4.2e-49 198.7 194 63.9
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 9.5e-49 197.6 197 65.5
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 2.1e-48 196.4 194 63.9
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 2.1e-48 196.4 196 58.7
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 2.8e-48 196.1 195 67.2
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 2.8e-48 196.1 194 63.9
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 4.7e-48 195.3 195 64.1
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 6.1e-48 194.9 195 62.1
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.0e-47 194.1 201 59.2
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.8e-47 193.4 201 59.2
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 4.0e-47 192.2 196 65.3
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 4.0e-47 192.2 195 64.6
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 8.9e-47 191.0 201 57.7
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 8.9e-47 191.0 201 57.7
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.5e-46 190.3 201 60.7
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 2.0e-46 189.9 199 65.8
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 2.0e-46 189.9 194 63.9
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 2.6e-46 189.5 195 63.1
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 4.4e-46 188.7 197 60.9
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 4.4e-46 188.7 201 60.2
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 5.7e-46 188.3 194 66.0
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 5.7e-46 188.3 185 62.7
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 5.7e-46 188.3 191 67.0
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 9.8e-46 187.6 190 66.8
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.7e-45 186.8 204 60.8
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 2.2e-45 186.4 199 61.3
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 2.8e-45 186.0 189 63.0
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 2.8e-45 186.0 199 59.8
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 4.9e-45 185.3 200 55.5
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 8.3e-45 184.5 189 66.1
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 8.3e-45 184.5 196 61.7
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 2.4e-44 183.0 202 62.4
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 2.4e-44 183.0 202 62.4
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 2.4e-44 183.0 202 62.4
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 2.7e-43 179.5 201 61.2
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 4.5e-43 178.7 200 62.0
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 4.5e-43 178.7 200 62.0
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 4.5e-43 178.7 201 58.7
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 7.8e-43 177.9 203 63.5
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 1.3e-42 177.2 189 62.4
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 1.3e-42 177.2 198 52.5
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 6.6e-42 174.9 200 59.0
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 6.6e-42 174.9 197 60.9
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 8.6e-42 174.5 198 60.6
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 8.6e-42 174.5 196 62.8
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 1.5e-41 173.7 195 61.5
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 1.5e-41 173.7 199 62.3
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 2.5e-41 172.9 202 60.9
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 4.3e-41 172.2 205 60.0
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 5.6e-41 171.8 194 60.8
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 7.3e-41 171.4 205 58.0
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 7.3e-41 171.4 204 56.9
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 2.1e-40 169.9 200 60.5
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 2.1e-40 169.9 199 56.8
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 8.0e-40 167.9 204 58.3
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 8.0e-40 167.9 200 58.0
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 1.0e-39 167.5 196 59.7
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 2.3e-39 166.4 199 59.3
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 3.0e-39 166.0 207 58.9
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 3.0e-39 166.0 194 57.7
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 3.0e-39 166.0 200 59.5
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 4.0e-39 165.6 199 58.8
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 4.4e-38 162.2 202 57.9
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 9.8e-38 161.0 136 71.3
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 1.7e-37 160.2 203 57.1
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 2.2e-37 159.8 197 57.9
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 3.7e-37 159.1 202 57.9
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 4.9e-37 158.7 208 57.2
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 1.1e-36 157.5 194 58.2
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.1e-36 157.5 194 57.7
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 2.4e-36 156.4 196 57.1
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 4.1e-36 155.6 194 58.2
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 4.1e-36 155.6 194 58.2
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 5.4e-36 155.2 136 69.9
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 2.0e-35 153.3 199 57.8
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 6.0e-35 151.8 196 57.1
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 1.0e-34 151.0 203 56.2
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.7e-34 150.2 199 56.8
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 3.9e-34 149.1 200 57.0
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 1.5e-33 147.1 199 56.3
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 1.9e-33 146.7 200 51.5
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 5.6e-33 145.2 200 45.0
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 9.5e-33 144.4 141 66.7
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 1.6e-32 143.7 170 51.2
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 8.0e-32 141.4 198 53.5
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 1.4e-31 140.6 194 46.4
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 1.8e-31 140.2 170 51.2
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 3.1e-31 139.4 189 55.6
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 6.8e-31 138.3 188 46.8
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 5.8e-30 135.2 170 48.8
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 7.5e-30 134.8 161 57.1
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 9.8e-30 134.4 194 52.6
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 4.9e-29 132.1 202 55.0
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 2.4e-28 129.8 147 63.3
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 5.1e-26 122.1 157 56.7
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 6.6e-26 121.7 187 46.0
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 5.6e-25 118.6 137 53.3
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 2.8e-24 116.3 157 54.1
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 2.8e-24 116.3 137 51.8
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 2.3e-23 113.2 125 54.4
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 1.3e-21 107.5 136 47.8
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 4.9e-21 105.5 136 46.3
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 4.1e-20 102.4 118 59.3
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 2.3e-18 96.7 189 46.6
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 3.1e-15 86.3 101 51.5
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 1.3e-13 80.9 104 61.5
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 7.8e-11 71.6 91 49.5
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 1.3e-10 70.9 115 53.9
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 3.0e-10 69.7 139 40.3
Lalb_Chr14g0364061 Lupinus albus HOM05D005729 ORTHO05D007026 1.2e-08 64.3 61 73.8
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 1.2e-08 64.3 132 37.9
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 1.6e-08 63.9 190 40.0
FvH4_3g27021 Fragaria vesca HOM05D005729 ORTHO05D007026 2.8e-08 63.2 74 51.4
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 2.4e-07 60.1 71 52.1
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 2.0e-06 57.0 110 38.2
Atru.chr6.2684 Acer truncatum HOM05D005729 ORTHO05D007026 5.8e-06 55.5 51 58.8


User provided reference genes

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