Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 9.6e-62 240.0 119 100.0
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 7.6e-43 177.2 119 74.8
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 4.3e-38 161.4 101 72.3
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.1e-37 159.1 114 64.9
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 2.8e-37 158.7 96 75.0
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 3.7e-37 158.3 114 64.0
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 6.2e-37 157.5 99 74.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 8.1e-37 157.1 106 70.8
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 1.2e-35 153.3 117 62.4
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 3.4e-35 151.8 110 65.5
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 5.8e-35 151.0 114 64.0
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 7.6e-35 150.6 112 61.6
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 7.6e-35 150.6 112 61.6
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.0e-34 150.2 109 66.1
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 1.3e-34 149.8 114 61.4
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.9e-34 148.7 112 60.7
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.9e-34 148.7 112 61.6
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 3.8e-34 148.3 99 67.7
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 6.5e-34 147.5 87 77.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.5e-34 147.5 113 60.2
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 6.5e-34 147.5 109 63.3
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 8.4e-34 147.1 112 64.3
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 1.1e-33 146.7 110 65.5
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 2.5e-33 145.6 114 62.3
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 3.2e-33 145.2 116 59.5
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 3.2e-33 145.2 110 61.8
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 5.5e-33 144.4 100 64.0
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 5.5e-33 144.4 114 58.8
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 7.1e-33 144.1 116 57.8
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 7.1e-33 144.1 92 71.7
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 7.1e-33 144.1 87 73.6
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.6e-32 142.9 110 61.8
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.6e-32 142.9 104 63.5
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 1.6e-32 142.9 105 64.8
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.1e-32 142.5 110 59.1
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.1e-32 142.5 100 63.0
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 2.1e-32 142.5 94 68.1
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 2.1e-32 142.5 110 60.0
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.1e-32 142.5 114 62.3
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 2.7e-32 142.1 113 60.2
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 2.7e-32 142.1 98 64.3
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 2.7e-32 142.1 102 62.7
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 2.7e-32 142.1 76 82.9
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.7e-32 142.1 97 68.0
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 4.6e-32 141.4 87 71.3
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 6.0e-32 141.0 116 61.2
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 6.0e-32 141.0 110 62.7
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 7.9e-32 140.6 98 63.3
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 7.9e-32 140.6 118 59.3
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 7.9e-32 140.6 104 60.6
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.0e-31 140.2 117 61.5
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.8e-31 139.4 102 63.7
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 1.8e-31 139.4 87 71.3
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 1.8e-31 139.4 87 71.3
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 1.8e-31 139.4 87 72.4
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.8e-31 139.4 110 58.2
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 2.3e-31 139.0 87 71.3
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 2.3e-31 139.0 87 71.3
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 2.3e-31 139.0 87 71.3
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 2.3e-31 139.0 87 71.3
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 2.3e-31 139.0 97 66.0
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 2.3e-31 139.0 97 66.0
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 2.3e-31 139.0 87 71.3
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.3e-31 139.0 96 66.7
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.3e-31 139.0 98 66.3
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.3e-31 139.0 87 72.4
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 3.0e-31 138.7 87 70.1
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 3.0e-31 138.7 87 70.1
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 3.0e-31 138.7 87 70.1
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 3.0e-31 138.7 108 60.2
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 3.0e-31 138.7 119 57.1
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 3.0e-31 138.7 100 62.0
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 3.9e-31 138.3 113 57.5
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 5.1e-31 137.9 87 70.1
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 6.7e-31 137.5 112 60.7
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 8.7e-31 137.1 114 60.5
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 8.7e-31 137.1 76 82.9
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.5e-30 136.3 113 59.3
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.5e-30 135.6 114 59.6
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 2.5e-30 135.6 87 67.8
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.5e-30 135.6 117 59.8
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 4.3e-30 134.8 87 69.0
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 7.4e-30 134.0 87 69.0
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 7.4e-30 134.0 112 59.8
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 2.8e-29 132.1 76 81.6
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 4.8e-29 131.3 95 62.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 1.8e-28 129.4 76 77.6
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 2.4e-28 129.0 100 62.0
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 3.1e-28 128.6 77 77.9
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 4.5e-27 124.8 90 63.3
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 5.8e-27 124.4 97 57.7
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 7.6e-27 124.0 76 75.0
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.1e-25 120.2 112 52.7
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.4e-25 119.8 112 50.0
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.9e-25 119.4 105 56.2
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.6e-24 116.3 103 58.3
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 1.8e-23 112.8 76 65.8
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.9e-22 109.4 98 58.2
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 9.7e-22 107.1 88 56.8
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 6.3e-21 104.4 95 53.7
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.1e-20 103.6 126 40.5
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 3.1e-20 102.1 107 46.7
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.1e-20 102.1 97 50.5
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 7.9e-16 87.4 76 52.6
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 2.5e-14 82.4 97 47.4
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.4e-12 75.9 110 35.5
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 5.1e-07 58.2 89 36.0
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 9.7e-06 53.9 79 35.4


User provided reference genes

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