Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 5.0e-224 780.8 395 100.0
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 2.1e-121 439.9 312 70.8
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.1e-119 434.1 316 69.3
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 3.3e-119 432.6 306 69.9
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.0e-116 423.3 339 63.7
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.6e-113 413.7 318 63.8
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 2.7e-113 412.9 309 66.7
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.6e-113 412.5 329 62.9
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 4.7e-113 412.1 318 62.9
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 4.7e-113 412.1 328 63.1
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 6.1e-113 411.8 309 66.0
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 1.0e-112 411.0 329 62.6
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.8e-112 410.2 318 63.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 3.9e-112 409.1 328 62.5
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 5.2e-112 408.7 315 64.1
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 5.2e-112 408.7 331 62.8
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.1e-111 407.5 327 62.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.6e-111 406.4 313 64.9
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 3.3e-111 406.0 309 66.3
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 4.4e-111 405.6 311 65.3
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 1.3e-110 404.1 313 65.2
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.2e-110 403.3 313 63.6
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 2.2e-110 403.3 319 63.9
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.2e-110 403.3 304 64.8
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.2e-110 403.3 313 63.6
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 2.2e-110 403.3 313 63.6
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.8e-110 402.9 323 63.5
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.7e-110 402.5 310 65.8
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 4.8e-110 402.1 328 60.7
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 4.8e-110 402.1 313 64.9
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 1.1e-109 401.0 319 62.7
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.8e-109 400.2 313 63.9
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.8e-109 400.2 325 61.2
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.8e-109 400.2 319 62.4
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 2.4e-109 399.8 319 63.3
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 3.1e-109 399.4 325 60.0
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 3.1e-109 399.4 311 65.0
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 9.1e-109 397.9 319 62.4
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 1.6e-108 397.1 304 65.5
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.0e-108 396.7 313 63.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 4.5e-108 395.6 320 61.9
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.0e-107 394.4 322 60.6
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.7e-107 393.7 307 63.5
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 2.9e-107 392.9 329 59.9
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 3.8e-107 392.5 319 61.1
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 5.0e-107 392.1 337 58.5
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 8.5e-107 391.3 314 62.1
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 1.1e-106 391.0 314 61.5
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 1.1e-106 391.0 301 65.4
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 1.1e-106 391.0 307 61.9
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.5e-106 390.6 315 62.2
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 1.5e-106 390.6 315 61.6
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.9e-106 390.2 315 61.6
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 1.9e-106 390.2 315 62.5
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 4.2e-106 389.0 310 61.3
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 5.5e-106 388.7 297 66.3
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 9.4e-106 387.9 317 59.3
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 9.4e-106 387.9 320 60.0
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 9.4e-106 387.9 306 63.1
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 9.4e-106 387.9 327 61.2
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 2.1e-105 386.7 317 59.6
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 3.6e-105 386.0 328 59.1
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.7e-105 385.6 325 59.4
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 6.1e-105 385.2 315 59.4
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 8.0e-105 384.8 304 62.2
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 8.0e-105 384.8 318 59.4
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.4e-104 384.0 304 61.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 3.0e-104 382.9 312 59.0
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 4.0e-104 382.5 308 59.4
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 5.2e-104 382.1 308 58.8
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 8.8e-104 381.3 312 62.8
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 8.8e-104 381.3 316 61.4
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.5e-103 380.6 304 61.8
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.5e-103 380.6 317 58.7
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.5e-103 380.6 317 58.7
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.6e-103 379.8 304 61.8
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 3.3e-103 379.4 314 60.8
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 4.4e-103 379.0 327 60.9
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 7.5e-103 378.3 325 57.8
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 1.3e-102 377.5 315 59.4
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.7e-102 377.1 337 57.3
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 2.2e-102 376.7 309 61.5
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 3.7e-102 375.9 305 60.7
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.8e-102 375.6 306 60.5
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 7.0e-101 371.7 306 58.8
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 1.2e-100 370.9 309 58.6
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.5e-100 369.0 310 58.7
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 5.5e-98 362.1 288 63.9
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 9.4e-98 361.3 309 57.9
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 9.4e-98 361.3 307 58.3
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.2e-97 360.9 304 58.2
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 1.0e-96 357.8 299 58.5
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 5.2e-96 355.5 304 58.9
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 6.8e-96 355.1 307 57.7
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 4.4e-95 352.4 308 56.8
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 7.5e-95 351.7 278 62.6
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.8e-94 349.7 307 59.6
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.7e-92 343.2 337 54.3
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 3.5e-92 342.8 313 58.1
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.8e-91 339.3 355 53.8
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.5e-87 327.4 303 56.4
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.7e-86 323.9 281 60.1
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 7.0e-85 318.5 266 61.3
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.6e-84 317.4 297 55.6
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 8.6e-83 311.6 258 62.4
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 1.5e-82 310.8 237 66.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.3e-82 309.7 237 65.8
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 4.3e-82 309.3 255 61.6
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 5.8e-79 298.9 304 51.3
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 7.5e-79 298.5 301 51.2
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 5.6e-74 282.3 224 66.1
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 1.6e-73 280.8 301 50.5
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.2e-71 274.6 224 62.9
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 7.0e-69 265.4 257 56.0
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 8.6e-67 258.5 399 39.3
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 1.4e-64 251.1 223 58.3
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 8.1e-49 198.7 296 39.5
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 6.9e-40 169.1 299 38.8
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 2.6e-39 167.2 176 52.3
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-38 164.9 230 44.8
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.5e-36 156.8 202 47.0
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-34 151.8 142 57.0
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.1e-32 143.7 142 54.9
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.9e-30 137.1 117 58.1
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 6.7e-27 125.9 203 41.4
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 5.3e-24 116.3 294 29.9
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 5.8e-23 112.8 137 48.2
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.9e-21 107.8 109 51.4
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 8.5e-14 82.4 70 55.7
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 5.5e-13 79.7 232 27.2
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 7.2e-13 79.3 68 54.4
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 8.2e-09 65.9 88 42.0


User provided reference genes

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