Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_92.g28106 Utricularia gibba HOM05D005470 ORTHO05D006855 1.6e-73 279.3 133 100.0
Oeu015466.1 Olea europaea HOM05D005470 ORTHO05D006855 7.2e-50 200.7 128 73.4
vmacro02749 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 2.6e-47 192.2 112 80.4
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 3.3e-47 191.8 108 81.5
Cc01_g17220 Coffea canephora HOM05D005470 ORTHO05D006855 9.7e-47 190.3 106 84.0
MSTRG.21429 Avicennia marina HOM05D005470 ORTHO05D006855 1.7e-46 189.5 110 79.1
CSS0013378 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 1.8e-45 186.0 114 75.4
SGA_v2.0_scaffold8G04652 Striga asiatica HOM05D005470 ORTHO05D006855 1.8e-45 186.0 113 79.6
Migut.I00044 Erythranthe guttata HOM05D005470 ORTHO05D006855 2.0e-44 182.6 108 79.6
TAR365G0091 Trochodendron aralioides HOM05D005470 ORTHO05D006855 2.0e-44 182.6 107 77.6
TAR365G1033 Trochodendron aralioides HOM05D005470 ORTHO05D006855 2.0e-44 182.6 107 77.6
Hma1.2p1_1061F.1_g253380 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 5.9e-44 181.0 118 72.9
Migut.D00523 Erythranthe guttata HOM05D005470 ORTHO05D006855 7.7e-44 180.6 112 78.6
Cpa.g.sc8.172 Carica papaya HOM05D005470 ORTHO05D006855 1.3e-43 179.9 128 68.0
Hma1.2p1_1061F.1_g253390 Hydrangea macrophylla HOM05D005470 ORTHO05D006855 3.8e-43 178.3 110 74.5
Lj2A1133T34 Lonicera japonica HOM05D005470 ORTHO05D006855 6.5e-43 177.6 106 78.3
Nitab4.5_0000866g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 6.5e-43 177.6 122 68.0
Lj1g0018515 Lotus japonicus HOM05D005470 ORTHO05D006855 1.1e-42 176.8 107 73.8
Sopen09g024670 Solanum pennellii HOM05D005470 ORTHO05D006855 1.4e-42 176.4 127 66.9
arahy.Tifrunner.gnm1.ann1.07T9WF Arachis hypogaea HOM05D005470 ORTHO05D006855 1.9e-42 176.0 107 73.8
arahy.Tifrunner.gnm1.ann1.4GE7F8 Arachis hypogaea HOM05D005470 ORTHO05D006855 1.9e-42 176.0 107 73.8
arahy.Tifrunner.gnm1.ann1.KE0QUS Arachis hypogaea HOM05D005470 ORTHO05D006855 1.9e-42 176.0 107 73.8
FvH4_2g19300 Fragaria vesca HOM05D005470 ORTHO05D006855 1.9e-42 176.0 122 69.7
Manes.12G042650 Manihot esculenta HOM05D005470 ORTHO05D006855 1.9e-42 176.0 111 73.9
RcHm_v2.0_Chr6g0285101 Rosa chinensis HOM05D005470 ORTHO05D006855 1.9e-42 176.0 109 75.2
FAN24G1307 Fragaria x ananassa HOM05D005470 ORTHO05D006855 2.5e-42 175.6 122 68.9
Solyc09g061680.3 Solanum lycopersicum HOM05D005470 ORTHO05D006855 2.5e-42 175.6 127 66.9
CANSAT56G1556 Cannabis sativa HOM05D005470 ORTHO05D006855 3.2e-42 175.3 109 71.6
PGR083G1301 Punica granatum HOM05D005470 ORTHO05D006855 3.2e-42 175.3 108 74.1
Dinv04663 Davidia involucrata HOM05D005470 ORTHO05D006855 4.2e-42 174.9 104 78.8
PGSC0003DMG400002375 Solanum tuberosum HOM05D005470 ORTHO05D006855 4.2e-42 174.9 122 68.0
Ca_07533_v3 Cicer arietinum L. HOM05D005470 ORTHO05D006855 5.5e-42 174.5 113 69.9
HanXRQChr04g0110691 Helianthus annuus HOM05D005470 ORTHO05D006855 5.5e-42 174.5 116 70.7
MD10G1166100 Malus domestica HOM05D005470 ORTHO05D006855 5.5e-42 174.5 123 69.9
Nn3g19926 Nelumbo nucifera HOM05D005470 ORTHO05D006855 7.2e-42 174.1 107 73.8
THA.LOC104802678 Tarenaya hassleriana HOM05D005470 ORTHO05D006855 9.4e-42 173.7 116 68.1
Nitab4.5_0000866g0080 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.2e-41 173.3 122 66.4
Nitab4.5_0003790g0040 Nicotiana tabacum HOM05D005470 ORTHO05D006855 1.2e-41 173.3 122 66.4
Haze_24781 Corylus avellana HOM05D005470 ORTHO05D006855 1.6e-41 172.9 105 74.3
Nn1g07785 Nelumbo nucifera HOM05D005470 ORTHO05D006855 1.6e-41 172.9 107 72.9
Sc17g0002580 Simmondsia chinensis HOM05D005470 ORTHO05D006855 1.6e-41 172.9 113 69.0
Duzib211G0062 Durio zibethinus HOM05D005470 ORTHO05D006855 2.1e-41 172.6 105 76.2
Potri.002G240800 Populus trichocarpa HOM05D005470 ORTHO05D006855 2.7e-41 172.2 106 72.6
GSVIVG01028578001 Vitis vinifera HOM05D005470 ORTHO05D006855 2.7e-41 172.2 101 76.2
Cfa002558 Carpinus fangiana HOM05D005470 ORTHO05D006855 3.6e-41 171.8 105 73.3
Prupe.8G204600 Prunus persica HOM05D005470 ORTHO05D006855 3.6e-41 171.8 109 72.5
Gohir.A07G156000 Gossypium hirsutum HOM05D005470 ORTHO05D006855 6.1e-41 171.0 109 73.4
Gohir.D07G162300 Gossypium hirsutum HOM05D005470 ORTHO05D006855 6.1e-41 171.0 109 73.4
Gorai.001G185900 Gossypium raimondii HOM05D005470 ORTHO05D006855 6.1e-41 171.0 109 73.4
QL03p049466 Quercus lobata HOM05D005470 ORTHO05D006855 6.1e-41 171.0 117 68.4
CiPaw.04G106400 Carya illinoinensis HOM05D005470 ORTHO05D006855 1.0e-40 170.2 117 68.4
Lalb_Chr19g0125551 Lupinus albus HOM05D005470 ORTHO05D006855 1.0e-40 170.2 109 69.7
EL10Ac7g17787 Beta vulgaris HOM05D005470 ORTHO05D006855 1.4e-40 169.9 113 69.0
Psat3g144240 Pisum sativum HOM05D005470 ORTHO05D006855 1.8e-40 169.5 113 67.3
AUR62031834 Chenopodium quinoa HOM05D005470 ORTHO05D006855 3.0e-40 168.7 115 71.3
Eucgr.H00804 Eucalyptus grandis HOM05D005470 ORTHO05D006855 3.0e-40 168.7 118 65.3
Glyma.18G172500 Glycine max HOM05D005470 ORTHO05D006855 3.0e-40 168.7 108 71.3
Lsat_1_v5_gn_8_90101 Lactuca sativa HOM05D005470 ORTHO05D006855 3.0e-40 168.7 121 66.9
PSO017G3643 Papaver somniferum HOM05D005470 ORTHO05D006855 3.0e-40 168.7 101 79.2
PSO478G2025 Papaver somniferum HOM05D005470 ORTHO05D006855 3.9e-40 168.3 101 79.2
Hund18358 Selenicereus undatus HOM05D005470 ORTHO05D006855 3.9e-40 168.3 124 65.3
Sabra02G0183400 Salix brachista HOM05D005470 ORTHO05D006855 5.2e-40 167.9 106 69.8
Medtr7g058920 Medicago truncatula HOM05D005470 ORTHO05D006855 8.8e-40 167.2 110 69.1
Sed0016487 Sechium edule HOM05D005470 ORTHO05D006855 1.1e-39 166.8 112 67.0
Atru.chr5.1498 Acer truncatum HOM05D005470 ORTHO05D006855 1.5e-39 166.4 105 72.4
TAR636G1319 Trochodendron aralioides HOM05D005470 ORTHO05D006855 1.5e-39 166.4 107 73.8
SHI28627 Sapria himalayana HOM05D005470 ORTHO05D006855 3.3e-39 165.2 119 67.2
TPR.G15281 Trifolium pratense HOM05D005470 ORTHO05D006855 5.7e-39 164.5 106 70.8
Thecc.01G227800 Theobroma cacao HOM05D005470 ORTHO05D006855 7.4e-39 164.1 107 71.0
Aqoxy2G03764 Aquilegia oxysepala HOM05D005470 ORTHO05D006855 1.3e-38 163.3 102 75.5
AT5G48840 Arabidopsis thaliana HOM05D005470 ORTHO05D006855 2.8e-38 162.2 118 66.9
TWI75G1873 Tripterygium wilfordii HOM05D005470 ORTHO05D006855 2.8e-38 162.2 101 71.3
VMungo0516G0001 Vigna mungo HOM05D005470 ORTHO05D006855 3.7e-38 161.8 110 66.4
CAN.G1273.33 Capsicum annuum HOM05D005470 ORTHO05D006855 4.8e-38 161.4 114 68.4
Actinidia37584 Actinidia chinensis HOM05D005470 ORTHO05D006855 8.2e-38 160.6 105 70.5
ClCG07G001860 Citrullus lanatus HOM05D005470 ORTHO05D006855 8.2e-38 160.6 102 69.6
DCAR_018553 Daucus carota HOM05D005470 ORTHO05D006855 1.1e-37 160.2 93 77.4
Phvul.007G209400 Phaseolus vulgaris HOM05D005470 ORTHO05D006855 1.1e-37 160.2 107 67.3
Carub.0008s0857 Capsella rubella HOM05D005470 ORTHO05D006855 2.4e-37 159.1 102 72.5
AL8G22020 Arabidopsis lyrata HOM05D005470 ORTHO05D006855 3.1e-37 158.7 118 66.9
Ciclev10021316m.g Citrus clementina HOM05D005470 ORTHO05D006855 1.2e-36 156.8 92 79.3
Atru.chr5.2014 Acer truncatum HOM05D005470 ORTHO05D006855 2.6e-36 155.6 109 66.1
Ah.08g214020 Amaranthus hybridus HOM05D005470 ORTHO05D006855 2.6e-36 155.6 117 62.4
MELO3C026704.2 Cucumis melo HOM05D005470 ORTHO05D006855 2.6e-36 155.6 101 69.3
Aa31sc866G40 Aethionema arabicum HOM05D005470 ORTHO05D006855 1.0e-35 153.7 102 72.5
CsaV3_3G028840 Cucumis sativus L. HOM05D005470 ORTHO05D006855 1.0e-35 153.7 101 68.3
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 1.9e-34 149.4 106 67.0
BraA06t26801Z Brassica rapa HOM05D005470 ORTHO05D006855 1.9e-34 149.4 106 67.0
CARHR182880 Cardamine hirsuta HOM05D005470 ORTHO05D006855 1.9e-34 149.4 101 68.3
Thhalv10004618m.g Eutrema salsugineum HOM05D005470 ORTHO05D006855 1.9e-34 149.4 110 65.5
MBI07_g00286_MAGBIO Magnolia biondii HOM05D004483 ORTHO05D005609 4.2e-34 148.3 94 73.4
BcaC06g30753 Brassica carinata HOM05D005470 ORTHO05D006855 5.5e-34 147.9 117 63.2
Sp2g19240 Schrenkiella parvula HOM05D005470 ORTHO05D006855 5.5e-34 147.9 110 65.5
CsaV3_6G036910 Cucumis sativus L. HOM05D005470 ORTHO05D006855 7.2e-34 147.5 108 63.9
C07p39460 Brassica napus HOM05D005470 ORTHO05D006855 9.4e-34 147.1 117 63.2
BolC7t44465H Brassica oleracea HOM05D005470 ORTHO05D006855 9.4e-34 147.1 117 63.2
BcaC06g30729 Brassica carinata HOM05D005470 ORTHO05D006855 1.2e-33 146.7 115 63.5
CDE01G0096 Ceratophyllum demersum HOM05D005470 ORTHO05D006855 1.2e-33 146.7 103 65.0
Peaxi162Scf00107g01116 Petunia axillaris HOM05D005470 ORTHO05D006855 7.5e-31 137.5 117 55.6
ATR0736G181 Amborella trichopoda HOM05D005470 ORTHO05D006855 4.8e-30 134.8 112 54.5
SMO144G0038 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 2.7e-28 129.0 97 61.9
HPP92_021568 Vanilla planifolia HOM05D005470 ORTHO05D006855 4.5e-28 128.3 97 61.9
Os03g0851800 Oryza sativa ssp. japonica HOM05D005470 ORTHO05D006855 5.9e-28 127.9 117 56.4
AUR62008875 Chenopodium quinoa HOM05D005470 ORTHO05D006855 1.0e-27 127.1 92 64.1
Mapoly0006s0023 Marchantia polymorpha HOM05D005470 ORTHO05D006855 8.5e-27 124.0 107 56.1
SMO351G0371 Selaginella moellendorffii HOM05D005470 ORTHO05D006855 7.2e-26 120.9 97 58.8
Pp3c24_12730 Physcomitrium patens HOM05D005470 ORTHO05D006855 1.6e-25 119.8 101 55.4
Zm00001eb064670 Zea mays HOM05D005470 ORTHO05D006855 1.6e-25 119.8 113 55.8
SEGI_26814 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 3.6e-25 118.6 97 59.8
SEGI_32261 Sequoiadendron giganteum HOM05D005470 ORTHO05D006855 1.0e-24 117.1 97 56.7
HanXRQChr16g0514371 Helianthus annuus HOM05D005470 ORTHO05D006855 1.3e-22 110.2 69 72.5
CBR_g41676 Chara braunii HOM05D005470 ORTHO05D006855 3.7e-22 108.6 101 51.5
MCO10G244 Micromonas commoda HOM05D005470 ORTHO05D006855 1.1e-21 107.1 97 52.6
CAN.G122.7 Capsicum annuum HOM05D005470 ORTHO05D006855 6.6e-19 97.8 118 45.8
CSS0038259 Camellia sinensis var. sinensis HOM05D005470 ORTHO05D006855 3.3e-18 95.5 74 60.8
Cre02.g090150 Chlamydomonas reinhardtii HOM05D005470 ORTHO05D006855 1.4e-16 90.1 91 47.3
MD05G1178000 Malus domestica HOM05D005470 ORTHO05D006855 1.8e-16 89.7 65 64.6
vmacro15781 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 3.7e-14 82.0 63 61.9
Haze_26957 Corylus avellana HOM05D005470 ORTHO05D006855 2.4e-13 79.3 78 44.9
vmacro23327 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 5.9e-12 74.7 64 59.4
Cfa025604 Carpinus fangiana HOM05D005470 ORTHO05D006855 1.7e-11 73.2 102 39.2
vmacro15783 Vaccinium macrocarpon HOM05D005470 ORTHO05D006855 2.9e-11 72.4 43 74.4
CANSAT54G2179 Cannabis sativa HOM05D005470 ORTHO05D006855 9.5e-10 67.4 76 47.4
Glyma.08G355700 Glycine max HOM05D005470 ORTHO05D006855 6.4e-06 54.7 43 62.8


User provided reference genes

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