Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_91.g26522 Utricularia gibba HOM05D000963 ORTHO05D004715 8.7e-47 189.9 91 100.0
unitig_91.g26525 Utricularia gibba HOM05D000963 ORTHO05D004715 8.7e-47 189.9 91 100.0
Sopen06g015060 Solanum pennellii HOM05D000963 ORTHO05D004715 4.9e-34 147.5 77 85.7
PGSC0003DMG400034831 Solanum tuberosum HOM05D000963 ORTHO05D004715 4.9e-34 147.5 77 85.7
Migut.D01391 Erythranthe guttata HOM05D000963 ORTHO05D004715 6.4e-34 147.1 67 98.5
Sed0012027 Sechium edule HOM05D000963 ORTHO05D004715 8.4e-34 146.7 76 86.8
Lsat_1_v5_gn_1_88180 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-33 146.0 67 97.0
Lsat_1_v5_gn_2_97121 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-33 146.0 67 97.0
Lsat_1_v5_gn_8_139840 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-33 146.0 89 79.8
Lsat_1_v5_gn_9_121741 Lactuca sativa HOM05D000963 ORTHO05D004715 1.4e-33 146.0 67 97.0
Sed0014585 Sechium edule HOM05D000963 ORTHO05D004715 1.4e-33 146.0 67 97.0
QL10p017079 Quercus lobata HOM05D000963 ORTHO05D004715 1.9e-33 145.6 66 97.0
QL93p0141_0026 Quercus lobata HOM05D000963 ORTHO05D004715 1.9e-33 145.6 66 97.0
BolC9t56918H Brassica oleracea HOM05D000963 ORTHO05D004715 3.2e-33 144.8 67 97.0
Atru.chr1.3576 Acer truncatum HOM05D000963 ORTHO05D004715 4.2e-33 144.4 67 95.5
arahy.Tifrunner.gnm1.ann1.0S9V2W Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.56M0GV Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.E29LBX Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.NRNC1F Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.PH4GL6 Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.RS9AFF Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.TDDH8C Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.UGP0DD Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.WD30LQ Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
arahy.Tifrunner.gnm1.ann1.ZA1EMG Arachis hypogaea HOM05D000963 ORTHO05D004715 5.5e-33 144.1 89 78.7
AL9U11970 Arabidopsis lyrata HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
arahy.Tifrunner.gnm1.ann1.WSE485 Arachis hypogaea HOM05D000963 ORTHO05D004715 7.1e-33 143.7 89 78.7
C09p40280 Brassica napus HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BolSC37t60787H Brassica oleracea HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BolSC44t60816H Brassica oleracea HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BolSC44t60829H Brassica oleracea HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BolSC49t61135H Brassica oleracea HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BraSC103t45422Z Brassica rapa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BraSC103t45433Z Brassica rapa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BraSC138t45541Z Brassica rapa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BraSC25t45904Z Brassica rapa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BraSC25t45917Z Brassica rapa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
BraSC59t46533Z Brassica rapa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 67 95.5
Potri.011G074033 Populus trichocarpa HOM05D000963 ORTHO05D004715 7.1e-33 143.7 89 78.7
QL93p0141_0000 Quercus lobata HOM05D000963 ORTHO05D004715 7.1e-33 143.7 66 95.5
arahy.Tifrunner.gnm1.ann1.54C0KZ Arachis hypogaea HOM05D000963 ORTHO05D004715 1.6e-32 142.5 89 77.5
BolSC29t60541H Brassica oleracea HOM05D000963 ORTHO05D004715 2.1e-32 142.1 67 94.0
DCAR_014935 Daucus carota HOM05D000963 ORTHO05D004715 2.7e-32 141.7 67 94.0
Aqoxy38s008 Aquilegia oxysepala HOM05D000963 ORTHO05D004715 3.5e-32 141.4 67 95.5
C09p39330 Brassica napus HOM05D000963 ORTHO05D004715 3.5e-32 141.4 66 95.5
BraSC58t46456Z Brassica rapa HOM05D000963 ORTHO05D004715 6.0e-32 140.6 65 95.4
CAN.G1298.20 Capsicum annuum HOM05D000963 ORTHO05D004715 6.0e-32 140.6 77 81.8
CAN.G929.1 Capsicum annuum HOM05D000963 ORTHO05D004715 6.0e-32 140.6 77 81.8
FvH4_c3g00050 Fragaria vesca HOM05D000963 ORTHO05D004715 7.9e-32 140.2 67 94.0
COL.COLO4_02154 Corchorus olitorius HOM05D000963 ORTHO05D004715 1.3e-31 139.4 67 92.5
Gohir.A05G286366 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-31 139.4 67 92.5
CAN.G67.2 Capsicum annuum HOM05D000963 ORTHO05D004715 3.0e-31 138.3 77 81.8
BolSC45t60916H Brassica oleracea HOM05D000963 ORTHO05D004715 6.7e-31 137.1 63 95.2
CAN.G965.10 Capsicum annuum HOM05D000963 ORTHO05D004715 1.1e-30 136.3 66 95.5
Gohir.1Z049781 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.9e-30 135.6 67 91.0
Gohir.A07G151200 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.6e-30 133.3 67 89.6
Gohir.A02G134101 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.3e-29 132.9 63 92.1
Lsat_1_v5_gn_2_50801 Lactuca sativa HOM05D000963 ORTHO05D004715 1.3e-29 132.9 66 89.4
Gohir.A04G057626 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-29 132.5 67 86.6
Gohir.D04G054150 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-29 132.5 70 84.3
Gohir.D04G096676 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.6e-29 132.5 67 88.1
Lsat_1_v5_gn_5_181901 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-29 132.5 64 90.6
Lsat_1_v5_gn_5_4701 Lactuca sativa HOM05D000963 ORTHO05D004715 1.6e-29 132.5 64 90.6
Sc01g0005720 Simmondsia chinensis HOM05D000963 ORTHO05D004715 4.8e-29 131.0 69 85.5
HPP92_028430 Vanilla planifolia HOM05D000963 ORTHO05D004715 2.4e-28 128.6 67 88.1
arahy.Tifrunner.gnm1.ann1.0QCF99 Arachis hypogaea HOM05D000963 ORTHO05D004715 5.3e-28 127.5 80 76.2
arahy.Tifrunner.gnm1.ann1.6K111H Arachis hypogaea HOM05D000963 ORTHO05D004715 5.3e-28 127.5 80 76.2
arahy.Tifrunner.gnm1.ann1.B9EW81 Arachis hypogaea HOM05D000963 ORTHO05D004715 5.3e-28 127.5 80 76.2
arahy.Tifrunner.gnm1.ann1.NMB5YK Arachis hypogaea HOM05D000963 ORTHO05D004715 5.3e-28 127.5 80 76.2
arahy.Tifrunner.gnm1.ann1.QIDR5S Arachis hypogaea HOM05D000963 ORTHO05D004715 5.3e-28 127.5 80 76.2
CAN.G1185.10 Capsicum annuum HOM05D000963 ORTHO05D004715 9.0e-28 126.7 64 84.4
Rhsim12G0135200 Rhododendron simsii HOM05D000963 ORTHO05D004715 9.0e-28 126.7 57 96.5
Gohir.A01G139826 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.5e-27 125.9 91 67.0
Dinv39831 Davidia involucrata HOM05D000963 ORTHO05D004715 4.5e-27 124.4 57 94.7
Nitab4.5_0008665g0030 Nicotiana tabacum HOM05D000963 ORTHO05D004715 1.3e-26 122.9 67 79.1
BraSC143t45652Z Brassica rapa HOM05D000963 ORTHO05D004715 1.7e-26 122.5 55 98.2
Lsat_1_v5_gn_1_109481 Lactuca sativa HOM05D000963 ORTHO05D004715 2.2e-26 122.1 65 81.5
Actinidia23508 Actinidia chinensis HOM05D000963 ORTHO05D004715 3.8e-26 121.3 64 84.4
Gohir.D03G074976 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.9e-26 120.9 58 89.7
Medtr5g080940 Medicago truncatula HOM05D000963 ORTHO05D004715 1.4e-25 119.4 65 83.1
arahy.Tifrunner.gnm1.ann1.R4PVYI Arachis hypogaea HOM05D000963 ORTHO05D004715 1.9e-25 119.0 79 72.2
arahy.Tifrunner.gnm1.ann1.LM30Y3 Arachis hypogaea HOM05D000963 ORTHO05D004715 2.5e-25 118.6 59 86.4
CsaV3_2G008200 Cucumis sativus L. HOM05D000963 ORTHO05D004715 2.5e-25 118.6 54 94.4
Sed0003522 Sechium edule HOM05D000963 ORTHO05D004715 3.2e-25 118.2 61 86.9
Sed0006422 Sechium edule HOM05D000963 ORTHO05D004715 3.2e-25 118.2 61 86.9
Dinv05169 Davidia involucrata HOM05D000963 ORTHO05D004715 9.3e-25 116.7 75 73.3
ECA074G0007 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.6e-24 115.9 53 96.2
ECA074G0008 Erigeron canadensis HOM05D000963 ORTHO05D004715 1.6e-24 115.9 53 96.2
BcaNung01516 Brassica carinata HOM05D000963 ORTHO05D004715 2.7e-24 115.2 53 94.3
HPP92_028419 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.9e-24 113.6 60 85.0
HPP92_028432 Vanilla planifolia HOM05D000963 ORTHO05D004715 7.9e-24 113.6 60 85.0
arahy.Tifrunner.gnm1.ann1.D5AR02 Arachis hypogaea HOM05D000963 ORTHO05D004715 1.0e-23 113.2 81 67.9
CSS0016818 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D004715 1.0e-23 113.2 53 94.3
Sabra11G0069300 Salix brachista HOM05D000963 ORTHO05D004715 1.0e-23 113.2 61 83.6
VMungo0331G0858 Vigna mungo HOM05D000963 ORTHO05D004715 2.3e-23 112.1 66 77.3
Phvul.003G259600 Phaseolus vulgaris HOM05D000963 ORTHO05D004715 3.9e-23 111.3 85 64.7
HPP92_028383 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.7e-23 110.2 60 83.3
HPP92_028406 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.7e-23 110.2 60 83.3
HPP92_028415 Vanilla planifolia HOM05D000963 ORTHO05D004715 8.7e-23 110.2 60 83.3
Oeu015131.2 Olea europaea HOM05D000963 ORTHO05D004715 1.5e-22 109.4 78 66.7
Gorai.002G027900 Gossypium raimondii HOM05D000963 ORTHO05D004715 1.9e-22 109.0 56 82.1
Glyma.06G274000 Glycine max HOM05D000963 ORTHO05D004715 3.3e-22 108.2 75 66.7
Gorai.012G060700 Gossypium raimondii HOM05D000963 ORTHO05D004715 7.4e-22 107.1 53 88.7
FAN13G1706 Fragaria x ananassa HOM05D000963 ORTHO05D004715 9.7e-22 106.7 53 90.6
FAN18G1953 Fragaria x ananassa HOM05D000315 ORTHO05D004100 1.6e-21 105.9 62 79.0
Psat3g162200 Pisum sativum HOM05D000963 ORTHO05D004715 4.8e-21 104.4 49 91.8
Sc25g0002020 Simmondsia chinensis HOM05D000963 ORTHO05D004715 2.4e-20 102.1 45 95.6
Gohir.D01G023469 Gossypium hirsutum HOM05D000963 ORTHO05D004715 4.1e-20 101.3 53 84.9
Gohir.A01G139250 Gossypium hirsutum HOM05D000963 ORTHO05D004715 9.0e-20 100.1 46 97.8
Hma1.2p1_0051F.1_g029250 Hydrangea macrophylla HOM05D000963 ORTHO05D004715 9.0e-20 100.1 43 97.7
TPR.G27622 Trifolium pratense HOM05D000963 ORTHO05D004715 1.3e-18 96.3 46 91.3
Mapoly0147s0015 Marchantia polymorpha HOM05D000963 ORTHO05D004715 2.2e-18 95.5 55 80.0
Gohir.D01G169154 Gossypium hirsutum HOM05D000963 ORTHO05D004715 1.1e-17 93.2 50 84.0
Medtr1g105230 Medicago truncatula HOM05D000963 ORTHO05D004715 1.4e-17 92.8 42 95.2
Gohir.A04G039030 Gossypium hirsutum HOM05D000963 ORTHO05D004715 5.5e-17 90.9 48 83.3
Oeu012821.1 Olea europaea HOM05D000963 ORTHO05D004715 7.2e-17 90.5 67 68.7
Oeu050315.1 Olea europaea HOM05D000963 ORTHO05D004715 7.2e-17 90.5 42 97.6
CAN.G1594.2 Capsicum annuum HOM05D016096 ORTHO05D016167 3.6e-16 88.2 66 69.7
Sed0011513 Sechium edule HOM05D000963 ORTHO05D004715 1.0e-15 86.7 45 86.7
Nitab4.5_0012234g0080 Nicotiana tabacum HOM05D000963 ORTHO05D004715 6.7e-15 84.0 40 92.5
DCAR_017253 Daucus carota HOM05D000963 ORTHO05D004715 3.3e-14 81.6 49 77.6
SalBow1G2814 Salvia bowleyana HOM05D000963 ORTHO05D004715 4.3e-14 81.3 43 86.0
SalBow1G5969 Salvia bowleyana HOM05D000963 ORTHO05D004715 4.3e-14 81.3 43 86.0
BraSC59t46506Z Brassica rapa HOM05D000963 ORTHO05D004715 3.1e-12 75.1 37 89.2
Gorai.002G200300 Gossypium raimondii HOM05D000963 ORTHO05D004715 4.1e-12 74.7 35 91.4
Psat5g119040 Pisum sativum HOM05D000963 ORTHO05D004715 5.3e-12 74.3 57 63.2
Sc21g0003630 Simmondsia chinensis HOM05D000556 ORTHO05D000404 6.1e-08 60.8 45 68.9
arahy.Tifrunner.gnm1.ann1.QZA5BL Arachis hypogaea HOM05D000963 ORTHO05D004715 5.7e-06 54.3 41 63.4
Nitab4.5_0007400g0120 Nicotiana tabacum HOM05D000963 ORTHO05D004715 5.7e-06 54.3 37 64.9


User provided reference genes

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