Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_90.g27553 Utricularia gibba HOM05D005916 ORTHO05D007168 3.9e-82 308.5 211 100.0
SGA_v2.0_scaffold69G23310 Striga asiatica HOM05D005916 ORTHO05D007168 1.2e-38 164.1 122 68.9
SGA_v2.0_scaffold136G34977 Striga asiatica HOM05D005916 ORTHO05D007168 1.7e-37 160.2 121 66.9
MSTRG.8396 Avicennia marina HOM05D005916 ORTHO05D007168 1.9e-36 156.8 122 67.2
Migut.F01212 Erythranthe guttata HOM05D005916 ORTHO05D007168 1.5e-33 147.1 123 68.3
SalBow2G2523 Salvia bowleyana HOM05D005916 ORTHO05D007168 5.7e-33 145.2 123 62.6
Psat6g202080 Pisum sativum HOM05D005916 ORTHO05D007168 2.8e-32 142.9 128 58.6
DCAR_014647 Daucus carota HOM05D005916 ORTHO05D007168 8.2e-32 141.4 122 58.2
Eucgr.A02936 Eucalyptus grandis HOM05D005916 ORTHO05D007168 8.2e-32 141.4 123 61.0
FAN10G1904 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.8e-31 140.2 128 60.9
Phvul.007G063000 Phaseolus vulgaris HOM05D005916 ORTHO05D007168 1.8e-31 140.2 128 61.7
FAN06G3885 Fragaria x ananassa HOM05D005916 ORTHO05D007168 2.4e-31 139.8 124 62.1
Glyma.10G242500 Glycine max HOM05D005916 ORTHO05D007168 6.9e-31 138.3 126 61.1
VMungo0720G1184 Vigna mungo HOM05D005916 ORTHO05D007168 9.1e-31 137.9 125 57.6
FAN01G2833 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.2e-30 137.5 132 59.1
arahy.Tifrunner.gnm1.ann1.VH0MPJ Arachis hypogaea HOM05D005916 ORTHO05D007168 2.0e-30 136.7 123 57.7
RcHm_v2.0_Chr1g0373201 Rosa chinensis HOM05D005916 ORTHO05D007168 3.4e-30 136.0 123 61.8
Ah.01g021910 Amaranthus hybridus HOM05D005916 ORTHO05D007168 4.5e-30 135.6 122 63.1
EL10Ac9g22675 Beta vulgaris HOM05D005916 ORTHO05D007168 4.5e-30 135.6 121 62.0
Oeu046440.1 Olea europaea HOM05D005916 ORTHO05D007168 7.7e-30 134.8 121 62.8
CSS0012195 Camellia sinensis var. sinensis HOM05D005916 ORTHO05D007168 2.2e-29 133.3 121 57.0
FvH4_7g26530 Fragaria vesca HOM05D005916 ORTHO05D007168 2.2e-29 133.3 121 59.5
Aqoxy3G02650 Aquilegia oxysepala HOM05D005916 ORTHO05D007168 2.9e-29 132.9 121 59.5
Gohir.D07G049300 Gossypium hirsutum HOM05D005916 ORTHO05D007168 2.9e-29 132.9 124 57.3
Gorai.001G052400 Gossypium raimondii HOM05D005916 ORTHO05D007168 2.9e-29 132.9 124 57.3
Thecc.03G145100 Theobroma cacao HOM05D005916 ORTHO05D007168 5.0e-29 132.1 125 56.8
Thhalv10014735m.g Eutrema salsugineum HOM05D005916 ORTHO05D007168 6.5e-29 131.7 124 61.3
Cpa.g.sc13.218 Carica papaya HOM05D005916 ORTHO05D007168 8.5e-29 131.3 127 58.3
Lj8A49T46 Lonicera japonica HOM05D005916 ORTHO05D007168 8.5e-29 131.3 125 56.8
Lj5g0003841 Lotus japonicus HOM05D005916 ORTHO05D007168 8.5e-29 131.3 124 56.5
Carub.0006s1828 Capsella rubella HOM05D005916 ORTHO05D007168 2.5e-28 129.8 124 60.5
Ca_10837_v3 Cicer arietinum L. HOM05D005916 ORTHO05D007168 2.5e-28 129.8 128 58.6
PSO063G1306 Papaver somniferum HOM05D005916 ORTHO05D007168 2.5e-28 129.8 121 57.0
PSO782G0331 Papaver somniferum HOM05D005916 ORTHO05D007168 2.5e-28 129.8 121 57.0
Potri.012G113400 Populus trichocarpa HOM05D005916 ORTHO05D007168 2.5e-28 129.8 126 57.1
TPR.G26100 Trifolium pratense HOM05D005916 ORTHO05D007168 4.2e-28 129.0 123 58.5
AL6G31440 Arabidopsis lyrata HOM05D005916 ORTHO05D007168 5.5e-28 128.6 124 61.3
Ciclev10032791m.g Citrus clementina HOM05D005916 ORTHO05D007168 7.2e-28 128.3 121 57.0
Cc00_g13060 Coffea canephora HOM05D005916 ORTHO05D007168 7.2e-28 128.3 121 58.7
Dinv34531 Davidia involucrata HOM05D005916 ORTHO05D007168 7.2e-28 128.3 121 55.4
Sp6g24470 Schrenkiella parvula HOM05D005916 ORTHO05D007168 9.4e-28 127.9 123 57.7
Atru.chr6.1973 Acer truncatum HOM05D005916 ORTHO05D007168 2.1e-27 126.7 123 57.7
COL.COLO4_37304 Corchorus olitorius HOM05D005916 ORTHO05D007168 2.1e-27 126.7 132 54.5
Haze_22228 Corylus avellana HOM05D005916 ORTHO05D007168 2.7e-27 126.3 138 53.6
Manes.06G129600 Manihot esculenta HOM05D005916 ORTHO05D007168 2.7e-27 126.3 124 55.6
arahy.Tifrunner.gnm1.ann1.7NV6YZ Arachis hypogaea HOM05D005916 ORTHO05D007168 3.6e-27 125.9 124 55.6
Nitab4.5_0000103g0220 Nicotiana tabacum HOM05D005916 ORTHO05D007168 4.7e-27 125.6 121 57.0
Nitab4.5_0003429g0010 Nicotiana tabacum HOM05D005916 ORTHO05D007168 6.1e-27 125.2 121 57.0
CANSAT56G4429 Cannabis sativa HOM05D005916 ORTHO05D007168 7.9e-27 124.8 124 57.3
CsaV3_4G004400 Cucumis sativus L. HOM05D005916 ORTHO05D007168 7.9e-27 124.8 122 58.2
PGR083G1688 Punica granatum HOM05D005916 ORTHO05D007168 1.0e-26 124.4 125 59.2
PGSC0003DMG403008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 1.4e-26 124.0 120 56.7
QL09p027336 Quercus lobata HOM05D005916 ORTHO05D007168 1.8e-26 123.6 121 55.4
GSVIVG01024482001 Vitis vinifera HOM05D005916 ORTHO05D007168 2.3e-26 123.2 121 56.2
ECA233G3320 Erigeron canadensis HOM05D005916 ORTHO05D007168 3.0e-26 122.9 122 59.0
EL10Ac5g12406 Beta vulgaris HOM05D005916 ORTHO05D007168 3.9e-26 122.5 121 59.5
Actinidia31761 Actinidia chinensis HOM05D005916 ORTHO05D007168 5.1e-26 122.1 120 55.0
CAN.G706.26 Capsicum annuum HOM05D005916 ORTHO05D007168 5.1e-26 122.1 121 56.2
Sopen03g024920 Solanum pennellii HOM05D005916 ORTHO05D007168 5.1e-26 122.1 121 56.2
Prupe.2G269700 Prunus persica HOM05D005916 ORTHO05D007168 6.7e-26 121.7 121 55.4
Sabra15G0132700 Salix brachista HOM05D005916 ORTHO05D007168 1.5e-25 120.6 127 50.4
MD01G1174300 Malus domestica HOM05D005916 ORTHO05D007168 2.0e-25 120.2 126 54.8
Solyc03g094030.4 Solanum lycopersicum HOM05D005916 ORTHO05D007168 2.0e-25 120.2 120 55.8
AT5G19910 Arabidopsis thaliana HOM05D005916 ORTHO05D007168 3.3e-25 119.4 124 55.6
Peaxi162Scf00073g01818 Petunia axillaris HOM05D005916 ORTHO05D007168 4.4e-25 119.0 121 55.4
vmacro09932 Vaccinium macrocarpon HOM05D005916 ORTHO05D007168 4.4e-25 119.0 129 54.3
Zm00001eb038950 Zea mays HOM05D005916 ORTHO05D007168 4.4e-25 119.0 130 53.1
Gohir.A07G044800 Gossypium hirsutum HOM05D005916 ORTHO05D007168 7.4e-25 118.2 123 54.5
THA.LOC104799659 Tarenaya hassleriana HOM05D005916 ORTHO05D007168 9.7e-25 117.9 124 54.8
Aa31LG2G19640 Aethionema arabicum HOM05D005916 ORTHO05D007168 1.3e-24 117.5 129 54.3
CiPaw.07G182800 Carya illinoinensis HOM05D005916 ORTHO05D007168 1.3e-24 117.5 124 54.0
CDE06G1827 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 1.3e-24 117.5 122 52.5
A02p05910 Brassica napus HOM05D005916 ORTHO05D007168 2.2e-24 116.7 124 56.5
BraA02t05543Z Brassica rapa HOM05D005916 ORTHO05D007168 2.2e-24 116.7 124 56.5
PSO541G5205 Papaver somniferum HOM05D005916 ORTHO05D007168 2.2e-24 116.7 120 52.5
Potri.015G110900 Populus trichocarpa HOM05D005916 ORTHO05D007168 2.2e-24 116.7 127 51.2
Hund13383 Selenicereus undatus HOM05D005916 ORTHO05D007168 3.7e-24 115.9 121 54.5
MELO3C017626.2 Cucumis melo HOM05D005916 ORTHO05D007168 4.8e-24 115.5 121 57.0
Glyma.20G151600 Glycine max HOM05D005916 ORTHO05D007168 4.8e-24 115.5 129 55.0
Sc17g0004780 Simmondsia chinensis HOM05D005916 ORTHO05D007168 4.8e-24 115.5 121 53.7
HanXRQChr08g0223361 Helianthus annuus HOM05D005916 ORTHO05D007168 6.3e-24 115.2 121 57.0
MD07G1241000 Malus domestica HOM05D005916 ORTHO05D007168 6.3e-24 115.2 126 51.6
BcaB08g36557 Brassica carinata HOM05D005916 ORTHO05D007168 8.2e-24 114.8 124 57.3
BNapus_Darmor_BZH_scaffold_38p01960 Brassica napus HOM05D005916 ORTHO05D007168 8.2e-24 114.8 124 57.3
BolC2t06995H Brassica oleracea HOM05D005916 ORTHO05D007168 8.2e-24 114.8 124 57.3
HanXRQChr03g0069461 Helianthus annuus HOM05D005916 ORTHO05D007168 8.2e-24 114.8 121 57.0
PSO675G3127 Papaver somniferum HOM05D005916 ORTHO05D007168 8.2e-24 114.8 122 54.1
Medtr1g102540 Medicago truncatula HOM05D005916 ORTHO05D007168 1.4e-23 114.0 122 51.6
Lsat_1_v5_gn_8_11541 Lactuca sativa HOM05D005916 ORTHO05D007168 1.8e-23 113.6 121 57.0
ClCG07G017200 Citrullus lanatus HOM05D005916 ORTHO05D007168 2.4e-23 113.2 121 53.7
TWI39G0778 Tripterygium wilfordii HOM05D005916 ORTHO05D007168 5.3e-23 112.1 121 52.1
BcaC04g19397 Brassica carinata HOM05D005916 ORTHO05D007168 7.0e-23 111.7 124 55.6
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 7.0e-23 111.7 124 55.6
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 7.0e-23 111.7 124 55.6
CDE06G2153 Ceratophyllum demersum HOM05D005916 ORTHO05D007168 7.0e-23 111.7 122 49.2
CARHR192950 Cardamine hirsuta HOM05D005916 ORTHO05D007168 9.1e-23 111.3 124 53.2
HPP92_020684 Vanilla planifolia HOM05D005916 ORTHO05D007168 9.1e-23 111.3 121 52.9
Nn6g33759 Nelumbo nucifera HOM05D005916 ORTHO05D007168 2.6e-22 109.8 127 49.6
MBI04_g13855_MAGBIO Magnolia biondii HOM05D005916 ORTHO05D007168 1.0e-21 107.8 53 88.7
Lalb_Chr24g0402981 Lupinus albus HOM05D005916 ORTHO05D007168 1.3e-21 107.5 124 48.4
FvH4_5g39330 Fragaria vesca HOM05D005916 ORTHO05D007168 1.7e-21 107.1 65 75.4
FAN08G1750 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.7e-21 107.1 65 75.4
FAN18G1579 Fragaria x ananassa HOM05D005916 ORTHO05D007168 1.7e-21 107.1 65 75.4
Os07g0164600 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 2.2e-21 106.7 52 86.5
Os10g0564100 Oryza sativa ssp. japonica HOM05D005916 ORTHO05D007168 3.8e-21 105.9 122 50.8
Sed0012421 Sechium edule HOM05D001364 ORTHO05D007168 1.1e-20 104.4 53 86.8
QL02p099223 Quercus lobata HOM05D005916 ORTHO05D007168 1.5e-20 104.0 72 66.7
CAN.G297.9 Capsicum annuum HOM05D005916 ORTHO05D007168 3.2e-20 102.8 122 50.8
AUR62029119 Chenopodium quinoa HOM05D005916 ORTHO05D007168 7.2e-20 101.7 50 86.0
AagrBONN_evm.TU.Sc2ySwM_362.2892 Anthoceros agrestis HOM05D005916 ORTHO05D007168 2.1e-19 100.1 53 83.0
TPR.G9644 Trifolium pratense HOM05D005916 ORTHO05D007168 2.7e-19 99.8 50 86.0
ATR1098G017 Amborella trichopoda HOM05D005916 ORTHO05D007168 4.7e-19 99.0 121 48.8
Pp3c26_180 Physcomitrium patens HOM05D005916 ORTHO05D007168 3.0e-18 96.3 53 77.4
FAN25G1847 Fragaria x ananassa HOM05D005916 ORTHO05D007168 4.0e-18 95.9 66 69.7
Mapoly0098s0031 Marchantia polymorpha HOM05D005916 ORTHO05D007168 6.7e-18 95.1 91 57.1
Atru.chr6.592 Acer truncatum HOM05D005916 ORTHO05D007168 8.8e-18 94.7 76 64.5
Hma1.2p1_1014F.1_g247870 Hydrangea macrophylla HOM05D005916 ORTHO05D007168 2.6e-17 93.2 96 53.1
Dinv21889 Davidia involucrata HOM05D005916 ORTHO05D007168 7.0e-15 85.1 115 46.1
FAN21G1143 Fragaria x ananassa HOM05D005916 ORTHO05D007168 6.5e-13 78.6 53 67.9
Rhsim09G0188200 Rhododendron simsii HOM05D001364 ORTHO05D001316 2.1e-11 73.6 92 47.8
PRCOL_00001580 Prasinoderma coloniale HOM05D005916 ORTHO05D007168 6.3e-08 62.0 45 55.6
PGSC0003DMG401008332 Solanum tuberosum HOM05D005916 ORTHO05D007168 7.0e-07 58.5 28 85.7


User provided reference genes

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