Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_90.g27515 Utricularia gibba HOM05D000591 ORTHO05D017187 7.5e-86 320.5 161 100.0
unitig_736.g22893 Utricularia gibba HOM05D000591 ORTHO05D000579 4.8e-48 194.9 114 87.7
MSTRG.36 Avicennia marina HOM05D000591 ORTHO05D000579 2.1e-40 169.5 151 62.3
MSTRG.8539 Avicennia marina HOM05D000591 ORTHO05D000579 5.3e-39 164.9 149 61.7
unitig_62.g23856 Utricularia gibba HOM05D000591 ORTHO05D017187 9.0e-39 164.1 147 57.8
unitig_64.g29779 Utricularia gibba HOM05D000591 ORTHO05D000579 9.0e-39 164.1 147 57.8
SGA_v2.0_scaffold141G35539 Striga asiatica HOM05D000591 ORTHO05D000579 2.6e-38 162.5 152 61.8
Migut.F00998 Erythranthe guttata HOM05D000591 ORTHO05D000579 1.6e-35 153.3 151 58.9
Oeu037024.1 Olea europaea HOM05D000591 ORTHO05D000579 1.7e-24 116.7 118 55.9
Cc02_g00990 Coffea canephora HOM05D000591 ORTHO05D000579 3.7e-24 115.5 120 54.2
Actinidia08685 Actinidia chinensis HOM05D000591 ORTHO05D000579 2.0e-22 109.8 120 54.2
CiPaw.05G202800 Carya illinoinensis HOM05D000591 ORTHO05D000579 2.6e-22 109.4 117 53.0
CSS0024009 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 7.7e-22 107.8 120 55.8
VMungo1309G2993 Vigna mungo HOM05D000591 ORTHO05D000579 2.9e-21 105.9 122 55.7
RcHm_v2.0_Chr1g0382501 Rosa chinensis HOM05D000591 ORTHO05D000579 3.8e-21 105.5 160 43.1
Nitab4.5_0000319g0240 Nicotiana tabacum HOM05D000591 ORTHO05D000579 5.0e-21 105.1 126 51.6
Phvul.009G050100 Phaseolus vulgaris HOM05D000591 ORTHO05D000579 5.0e-21 105.1 122 55.7
CSS0044193 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 6.5e-21 104.8 121 52.9
Thecc.03G206600 Theobroma cacao HOM05D000591 ORTHO05D000579 1.4e-20 103.6 117 53.8
Lsat_1_v5_gn_8_4600 Lactuca sativa HOM05D000591 ORTHO05D000579 7.2e-20 101.3 110 55.5
Nitab4.5_0001993g0050 Nicotiana tabacum HOM05D000591 ORTHO05D000579 7.2e-20 101.3 126 51.6
Glyma.04G231000 Glycine max HOM05D000591 ORTHO05D000579 1.2e-19 100.5 118 51.7
Actinidia34256 Actinidia chinensis HOM05D000591 ORTHO05D017187 1.6e-19 100.1 119 52.1
Cfa016176 Carpinus fangiana HOM05D000591 ORTHO05D000579 2.1e-19 99.8 153 43.8
PGSC0003DMG400003213 Solanum tuberosum HOM05D000591 ORTHO05D000579 2.1e-19 99.8 126 53.2
Dinv29228 Davidia involucrata HOM05D000591 ORTHO05D000579 2.7e-19 99.4 123 52.8
Psat5g073600 Pisum sativum HOM05D000591 ORTHO05D000579 2.7e-19 99.4 115 53.0
Solyc03g082500.4 Solanum lycopersicum HOM05D000591 ORTHO05D000579 2.7e-19 99.4 126 53.2
Gohir.A08G103200 Gossypium hirsutum HOM05D000591 ORTHO05D000579 3.6e-19 99.0 123 49.6
Glyma.06G134200 Glycine max HOM05D000591 ORTHO05D000579 4.7e-19 98.6 152 43.4
MD01G1227200 Malus domestica HOM05D000591 ORTHO05D000579 4.7e-19 98.6 149 46.3
Manes.05G191100 Manihot esculenta HOM05D000591 ORTHO05D000579 4.7e-19 98.6 117 51.3
Sopen03g022230 Solanum pennellii HOM05D000591 ORTHO05D000579 7.9e-19 97.8 126 52.4
CANSAT21G2015 Cannabis sativa HOM05D000591 ORTHO05D000579 1.0e-18 97.4 116 54.3
arahy.Tifrunner.gnm1.ann1.0E73VR Arachis hypogaea HOM05D000591 ORTHO05D000579 1.4e-18 97.1 120 50.8
arahy.Tifrunner.gnm1.ann1.P9STKW Arachis hypogaea HOM05D000591 ORTHO05D000579 1.4e-18 97.1 120 50.8
QL09p007431 Quercus lobata HOM05D000591 ORTHO05D000579 1.4e-18 97.1 125 52.0
Ca_16755_v3 Cicer arietinum L. HOM05D000591 ORTHO05D000579 3.9e-18 95.5 121 53.7
Dinv35372 Davidia involucrata HOM05D000591 ORTHO05D000579 3.9e-18 95.5 121 51.2
Prupe.2G317200 Prunus persica HOM05D000591 ORTHO05D000579 3.9e-18 95.5 149 44.3
Haze_00276 Corylus avellana HOM05D000591 ORTHO05D000579 5.1e-18 95.1 153 42.5
DCAR_010578 Daucus carota HOM05D000591 ORTHO05D000579 5.1e-18 95.1 152 44.1
Gohir.D08G115000 Gossypium hirsutum HOM05D000591 ORTHO05D000579 1.1e-17 94.0 123 48.0
Gorai.004G123900 Gossypium raimondii HOM05D000591 ORTHO05D000579 1.1e-17 94.0 123 48.0
HanXRQChr08g0225701 Helianthus annuus HOM05D000591 ORTHO05D000579 1.1e-17 94.0 114 49.1
Peaxi162Scf00740g00562 Petunia axillaris HOM05D000591 ORTHO05D000579 2.0e-17 93.2 122 52.5
Potri.012G023300 Populus trichocarpa HOM05D000591 ORTHO05D000579 2.0e-17 93.2 120 51.7
COL.COLO4_14350 Corchorus olitorius HOM05D000591 ORTHO05D000579 2.6e-17 92.8 117 48.7
MD07G1297500 Malus domestica HOM05D000591 ORTHO05D000579 2.6e-17 92.8 116 53.4
FAN10G3014 Fragaria x ananassa HOM05D000591 ORTHO05D000579 3.3e-17 92.4 119 49.6
Lsat_1_v5_gn_9_50240 Lactuca sativa HOM05D000591 ORTHO05D000579 3.3e-17 92.4 111 50.5
FAN10G0363 Fragaria x ananassa HOM05D000591 ORTHO05D000579 7.4e-17 91.3 115 50.4
TWI23G0505 Tripterygium wilfordii HOM05D000591 ORTHO05D000579 7.4e-17 91.3 151 44.4
Sabra12G0010600 Salix brachista HOM05D000591 ORTHO05D000579 9.7e-17 90.9 157 41.4
ECA233G1232 Erigeron canadensis HOM05D000591 ORTHO05D000579 2.2e-16 89.7 121 46.3
Lj1g0002091 Lotus japonicus HOM05D000591 ORTHO05D000579 2.2e-16 89.7 122 49.2
Lalb_Chr08g0239811 Lupinus albus HOM05D000591 ORTHO05D000579 2.8e-16 89.4 124 53.2
BcaB04g19824 Brassica carinata HOM05D000591 ORTHO05D000579 6.3e-16 88.2 153 44.4
BcaC07g39404 Brassica carinata HOM05D000591 ORTHO05D000579 1.1e-15 87.4 120 50.8
A06p18380 Brassica napus HOM05D000591 ORTHO05D000579 1.1e-15 87.4 120 50.8
C08p24410 Brassica napus HOM05D000591 ORTHO05D000579 1.1e-15 87.4 120 50.8
BraA06t24919Z Brassica rapa HOM05D000591 ORTHO05D000579 1.1e-15 87.4 120 50.8
BcaB02g09586 Brassica carinata HOM05D000591 ORTHO05D000579 1.4e-15 87.0 160 41.2
BolC8t50057H Brassica oleracea HOM05D000591 ORTHO05D000579 1.8e-15 86.7 120 50.8
BcaB01g00716 Brassica carinata HOM05D000591 ORTHO05D000579 5.3e-15 85.1 118 51.7
BraA06t26452Z Brassica rapa HOM05D000591 ORTHO05D000579 9.1e-15 84.3 116 49.1
Duzib205G0265 Durio zibethinus HOM05D000591 ORTHO05D000579 9.1e-15 84.3 123 46.3
BcaC01g02405 Brassica carinata HOM05D000591 ORTHO05D000579 1.2e-14 84.0 120 47.5
C03p65650 Brassica napus HOM05D000591 ORTHO05D000579 1.2e-14 84.0 120 47.5
BraA06t25761Z Brassica rapa HOM05D000591 ORTHO05D000579 1.2e-14 84.0 120 47.5
Medtr3g092230 Medicago truncatula HOM05D000591 ORTHO05D000579 1.2e-14 84.0 117 47.9
A06p28180 Brassica napus HOM05D000591 ORTHO05D000579 1.5e-14 83.6 120 47.5
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 1.5e-14 83.6 116 49.1
PGR142G2731 Punica granatum HOM05D000591 ORTHO05D000579 1.5e-14 83.6 121 47.1
AT3G49370 Arabidopsis thaliana HOM05D000591 ORTHO05D000579 2.6e-14 82.8 153 37.9
AL5G29130 Arabidopsis lyrata HOM05D000591 ORTHO05D000579 3.4e-14 82.4 119 48.7
BolC3t18817H Brassica oleracea HOM05D000591 ORTHO05D000579 3.4e-14 82.4 120 45.0
Lj3A897T90 Lonicera japonica HOM05D000591 ORTHO05D000579 3.4e-14 82.4 105 51.4
Sp2g22900 Schrenkiella parvula HOM05D000591 ORTHO05D000579 3.4e-14 82.4 120 48.3
THA.LOC104801871 Tarenaya hassleriana HOM05D000591 ORTHO05D000579 3.4e-14 82.4 119 45.4
Thhalv10003876m.g Eutrema salsugineum HOM05D000591 ORTHO05D000579 4.5e-14 82.0 122 47.5
Aa31LG4G17920 Aethionema arabicum HOM05D000591 ORTHO05D000579 1.0e-13 80.9 125 46.4
AL6G36010 Arabidopsis lyrata HOM05D000591 ORTHO05D000579 1.3e-13 80.5 122 46.7
Ciclev10019463m.g Citrus clementina HOM05D000591 ORTHO05D000579 1.3e-13 80.5 118 52.5
AT5G24430 Arabidopsis thaliana HOM05D000591 ORTHO05D000579 1.7e-13 80.1 124 49.2
Carub.0005s1570 Capsella rubella HOM05D000591 ORTHO05D000579 1.7e-13 80.1 117 47.9
Thhalv10010221m.g Eutrema salsugineum HOM05D000591 ORTHO05D000579 1.7e-13 80.1 119 47.9
CARHR188980 Cardamine hirsuta HOM05D000591 ORTHO05D000579 6.5e-13 78.2 122 44.3
Lalb_Chr11g0067261 Lupinus albus HOM05D000591 ORTHO05D000579 6.5e-13 78.2 122 44.3
CARHR158310 Cardamine hirsuta HOM05D000591 ORTHO05D000579 8.5e-13 77.8 113 45.1
ECA232G3232 Erigeron canadensis HOM05D000591 ORTHO05D000579 8.5e-13 77.8 123 42.3
Sp5g12700 Schrenkiella parvula HOM05D000591 ORTHO05D000579 8.5e-13 77.8 120 46.7
Aa31LG11G3690 Aethionema arabicum HOM05D000591 ORTHO05D000579 1.1e-12 77.4 126 44.4
BcaNung02022 Brassica carinata HOM05D000591 ORTHO05D000579 1.4e-12 77.0 117 47.0
C07p43240 Brassica napus HOM05D000591 ORTHO05D000579 1.4e-12 77.0 117 47.0
BolC7t44849H Brassica oleracea HOM05D000591 ORTHO05D000579 1.4e-12 77.0 117 47.0
Sed0017002 Sechium edule HOM05D000591 ORTHO05D000579 1.4e-12 77.0 116 46.6
A09p06520 Brassica napus HOM05D000591 ORTHO05D000579 2.5e-12 76.3 119 45.4
C09p07280 Brassica napus HOM05D000591 ORTHO05D001617 2.5e-12 76.3 117 46.2
BcaC04g23539 Brassica carinata HOM05D000591 ORTHO05D000579 3.2e-12 75.9 119 44.5
Sabra15G0004800 Salix brachista HOM05D000591 ORTHO05D000579 4.2e-12 75.5 166 36.7
Carub.0006s2226 Capsella rubella HOM05D000591 ORTHO05D000579 2.1e-11 73.2 120 43.3
vmacro12654 Vaccinium macrocarpon HOM05D000591 ORTHO05D000579 2.3e-10 69.7 157 37.6
ClCG01G000150 Citrullus lanatus HOM05D000591 ORTHO05D000579 3.9e-10 68.9 71 57.7
FvH4_7g32610 Fragaria vesca HOM05D000591 ORTHO05D000579 3.9e-10 68.9 117 44.4
FAN01G1762 Fragaria x ananassa HOM05D000591 ORTHO05D000579 6.7e-10 68.2 120 41.7
MELO3C005914.2 Cucumis melo HOM05D000591 ORTHO05D000579 1.5e-09 67.0 152 36.2
FAN03G0858 Fragaria x ananassa HOM05D000591 ORTHO05D011354 1.5e-09 67.0 120 40.8
BcaNung01234 Brassica carinata HOM05D000591 ORTHO05D000579 2.6e-09 66.2 118 45.8
EL10Ac3g05202 Beta vulgaris HOM05D000591 ORTHO05D000579 9.7e-09 64.3 121 42.1
Medtr7g118020 Medicago truncatula HOM05D000591 ORTHO05D000579 2.8e-08 62.8 155 39.4
vmacro06426 Vaccinium macrocarpon HOM05D000591 ORTHO05D000579 3.7e-08 62.4 119 40.3
ATR0579G091 Amborella trichopoda HOM05D000591 ORTHO05D000579 4.8e-08 62.0 163 36.8
Cpa.g.sc3.143 Carica papaya HOM05D000591 ORTHO05D000579 4.8e-08 62.0 119 42.0
AUR62006023 Chenopodium quinoa HOM05D000591 ORTHO05D000579 6.3e-08 61.6 106 42.5
Sp4g28740 Schrenkiella parvula HOM05D000591 ORTHO05D000579 1.4e-07 60.5 140 37.1
MSTRG.17377 Avicennia marina HOM05D000591 ORTHO05D000579 2.4e-07 59.7 158 36.7
AUR62035603 Chenopodium quinoa HOM05D000591 ORTHO05D000579 2.4e-07 59.7 59 55.9
EL10Ac1g00205 Beta vulgaris HOM05D000591 ORTHO05D000579 3.1e-07 59.3 123 44.7
Ah.05g179140 Amaranthus hybridus HOM05D000591 ORTHO05D000579 4.1e-07 58.9 116 41.4
CDE09G0534 Ceratophyllum demersum HOM05D000591 ORTHO05D000579 4.1e-07 58.9 162 36.4
AUR62035602 Chenopodium quinoa HOM05D000591 ORTHO05D000579 4.1e-07 58.9 70 54.3
ECA236G0275 Erigeron canadensis HOM05D000591 ORTHO05D000579 1.2e-06 57.4 157 34.4
TWI59G0749 Tripterygium wilfordii HOM05D000591 ORTHO05D000579 1.2e-06 57.4 127 38.6
Lsat_1_v5_gn_7_620 Lactuca sativa HOM05D000591 ORTHO05D000579 1.6e-06 57.0 165 34.5
Lsat_1_v5_gn_9_36021 Lactuca sativa HOM05D000080 ORTHO05D000053 1.6e-06 57.0 106 44.3
Peaxi162Scf00767g00037 Petunia axillaris HOM05D000591 ORTHO05D000579 1.6e-06 57.0 133 38.3
SHI13021 Sapria himalayana HOM05D000591 ORTHO05D000579 1.6e-06 57.0 159 38.4
Solyc01g096350.3 Solanum lycopersicum HOM05D000591 ORTHO05D000579 1.6e-06 57.0 120 41.7
Sopen01g040100 Solanum pennellii HOM05D000591 ORTHO05D000579 1.6e-06 57.0 120 41.7
THA.LOC104802090 Tarenaya hassleriana HOM05D000591 ORTHO05D000579 1.6e-06 57.0 147 36.7
CAN.G1045.44 Capsicum annuum HOM05D000591 ORTHO05D000579 2.0e-06 56.6 160 36.2
CDE11G0094 Ceratophyllum demersum HOM05D000591 ORTHO05D000767 2.0e-06 56.6 133 40.6
Rhsim03G0213800 Rhododendron simsii HOM05D000591 ORTHO05D000579 2.0e-06 56.6 120 36.7
RhsimUnG0011400 Rhododendron simsii HOM05D000591 ORTHO05D000579 2.0e-06 56.6 120 36.7
Eucgr.E00022 Eucalyptus grandis HOM05D000591 ORTHO05D000579 3.5e-06 55.8 124 41.9
PSO135G0934 Papaver somniferum HOM05D000591 ORTHO05D000579 3.5e-06 55.8 126 38.9
TPR.G33619 Trifolium pratense HOM05D000591 ORTHO05D000579 3.5e-06 55.8 122 41.8
Aa31LG1G28090 Aethionema arabicum HOM05D000591 ORTHO05D000579 5.9e-06 55.1 144 36.1
BcaB06g29480 Brassica carinata HOM05D000591 ORTHO05D000579 5.9e-06 55.1 100 42.0
Nn1g00398 Nelumbo nucifera HOM05D000591 ORTHO05D000579 7.7e-06 54.7 172 34.3
Sabra14G0076100 Salix brachista HOM05D000591 ORTHO05D000579 7.7e-06 54.7 160 33.1
Hund16739 Selenicereus undatus HOM05D000591 ORTHO05D000579 7.7e-06 54.7 124 40.3
TAR375G0165 Trochodendron aralioides HOM05D000591 ORTHO05D000579 7.7e-06 54.7 127 40.2
GSVIVG01027409001 Vitis vinifera HOM05D000591 ORTHO05D000579 7.7e-06 54.7 119 38.7


User provided reference genes

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