Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_90.g27472 Utricularia gibba HOM05D004654 ORTHO05D005414 3.2e-105 385.2 209 100.0
SGA_v2.0_scaffold8G04582 Striga asiatica HOM05D004654 ORTHO05D005414 2.0e-38 163.3 205 53.7
Migut.D00607 Erythranthe guttata HOM05D004654 ORTHO05D005414 2.1e-32 143.3 211 52.1
SGA_v2.0_scaffold247G44889 Striga asiatica HOM05D004654 ORTHO05D005414 9.0e-31 137.9 189 50.8
Oeu034013.1 Olea europaea HOM05D004654 ORTHO05D005414 1.9e-28 130.2 200 48.0
Oeu024775.2 Olea europaea HOM05D004654 ORTHO05D005414 2.4e-28 129.8 197 48.2
unitig_85.g27201 Utricularia gibba HOM05D004654 ORTHO05D005414 2.7e-27 126.3 157 51.6
SalBow6G0287 Salvia bowleyana HOM05D004654 ORTHO05D005414 4.6e-27 125.6 198 44.4
Nitab4.5_0003016g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.3e-24 117.5 208 41.8
Nitab4.5_0000235g0010 Nicotiana tabacum HOM05D004654 ORTHO05D005414 2.8e-24 116.3 212 41.0
PGSC0003DMG400024083 Solanum tuberosum HOM05D004654 ORTHO05D005414 1.1e-23 114.4 232 38.4
Nitab4.5_0008713g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.8e-23 113.6 227 41.9
PGSC0003DMG400037923 Solanum tuberosum HOM05D004654 ORTHO05D005414 4.0e-23 112.5 211 38.9
SGA_v2.0_scaffold42G16062 Striga asiatica HOM05D004654 ORTHO05D005414 9.0e-23 111.3 148 45.9
Solyc03g031950.3 Solanum lycopersicum HOM05D004654 ORTHO05D005414 1.7e-21 107.1 232 37.1
Sopen03g005810 Solanum pennellii HOM05D004654 ORTHO05D005414 1.7e-21 107.1 232 37.1
unitig_578.g16656 Utricularia gibba HOM05D004654 ORTHO05D005414 6.5e-21 105.1 108 60.2
Cc07_g12430 Coffea canephora HOM05D004654 ORTHO05D005414 5.5e-20 102.1 206 38.8
DCAR_002994 Daucus carota HOM05D004654 ORTHO05D005414 1.3e-18 97.4 189 42.3
Peaxi162Scf00918g00026 Petunia axillaris HOM05D004654 ORTHO05D005414 1.8e-18 97.1 226 42.0
Lsat_1_v5_gn_8_113741 Lactuca sativa HOM05D004654 ORTHO05D005414 5.7e-17 92.0 196 40.8
Actinidia17131 Actinidia chinensis HOM05D004654 ORTHO05D005414 2.1e-16 90.1 188 36.7
Rhsim08G0023400 Rhododendron simsii HOM05D004654 ORTHO05D005414 4.8e-16 89.0 204 36.3
Manes.02G082600 Manihot esculenta HOM05D004654 ORTHO05D005414 1.8e-15 87.0 185 37.8
Potri.017G142100 Populus trichocarpa HOM05D004654 ORTHO05D005414 5.3e-15 85.5 183 38.3
Manes.01G125100 Manihot esculenta HOM05D004654 ORTHO05D005414 2.6e-14 83.2 167 37.1
unitig_0.g296 Utricularia gibba HOM05D004654 ORTHO05D005414 4.5e-14 82.4 112 48.2
Potri.004G078500 Populus trichocarpa HOM05D004654 ORTHO05D005414 1.0e-13 81.3 158 38.6
Sabra17G0119000 Salix brachista HOM05D004654 ORTHO05D005414 1.3e-13 80.9 183 37.2
Lsat_1_v5_gn_2_72380 Lactuca sativa HOM05D004654 ORTHO05D005414 8.4e-13 78.2 148 36.5
HanXRQChr16g0532651 Helianthus annuus HOM05D004654 ORTHO05D005414 1.1e-12 77.8 182 33.5
Sabra04G0052000 Salix brachista HOM05D004654 ORTHO05D005414 1.1e-12 77.8 151 37.7
THA.LOC104822158 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.1e-12 77.8 198 38.9
Ciclev10012875m.g Citrus clementina HOM05D004654 ORTHO05D005414 2.5e-12 76.6 185 35.1
Dinv28280 Davidia involucrata HOM05D004654 ORTHO05D005414 3.2e-12 76.3 195 34.4
Hma1.2p1_0085F.1_g044140 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 3.2e-12 76.3 82 53.7
Hma1.2p1_2924F.1_g330430 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 3.2e-12 76.3 82 53.7
FAN26G0407 Fragaria x ananassa HOM05D004654 ORTHO05D005414 4.2e-12 75.9 193 36.8
FAN28G0874 Fragaria x ananassa HOM05D004654 ORTHO05D005414 4.2e-12 75.9 193 37.8
HanXRQChr15g0485191 Helianthus annuus HOM05D004654 ORTHO05D005414 4.2e-12 75.9 182 35.2
Actinidia35698 Actinidia chinensis HOM05D004654 ORTHO05D005414 5.5e-12 75.5 208 35.1
Cpa.g.sc108.18 Carica papaya HOM05D004654 ORTHO05D005414 1.2e-11 74.3 199 33.2
FAN28G0174 Fragaria x ananassa HOM05D004654 ORTHO05D005414 2.1e-11 73.6 193 37.3
vmacro20421 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 2.7e-11 73.2 200 35.0
HanXRQChr15g0486441 Helianthus annuus HOM05D004654 ORTHO05D005414 3.5e-11 72.8 165 35.8
GSVIVG01005258001 Vitis vinifera HOM05D004654 ORTHO05D005414 3.5e-11 72.8 193 35.2
Atru.chr1.2194 Acer truncatum HOM05D004654 ORTHO05D005414 6.1e-11 72.0 164 37.2
arahy.Tifrunner.gnm1.ann1.C1RHT9 Arachis hypogaea HOM05D004654 ORTHO05D005414 6.1e-11 72.0 181 37.6
vmacro23510 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 6.1e-11 72.0 195 39.0
THA.LOC104805666 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 7.9e-11 71.6 200 35.5
BraA07t30922Z Brassica rapa HOM05D004654 ORTHO05D005414 1.0e-10 71.2 198 35.4
ECA246G3021 Erigeron canadensis HOM05D004654 ORTHO05D005414 1.0e-10 71.2 182 34.1
arahy.Tifrunner.gnm1.ann1.70EH4T Arachis hypogaea HOM05D004654 ORTHO05D005414 1.3e-10 70.9 196 34.7
Dinv19105 Davidia involucrata HOM05D004654 ORTHO05D005414 1.3e-10 70.9 134 41.8
Glyma.18G046900 Glycine max HOM05D004654 ORTHO05D005414 1.3e-10 70.9 197 36.0
FAN19G2236 Fragaria x ananassa HOM05D004654 ORTHO05D005414 2.3e-10 70.1 103 48.5
arahy.Tifrunner.gnm1.ann1.6F687N Arachis hypogaea HOM05D004654 ORTHO05D005414 3.0e-10 69.7 179 34.6
Gohir.A08G038100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 3.0e-10 69.7 82 53.7
PGR004G1881 Punica granatum HOM05D004654 ORTHO05D005414 3.0e-10 69.7 157 38.2
Cfa008008 Carpinus fangiana HOM05D004654 ORTHO05D005414 3.9e-10 69.3 191 38.7
Aa31LG2G2610 Aethionema arabicum HOM05D004654 ORTHO05D005414 5.1e-10 68.9 195 34.4
A07p32950 Brassica napus HOM05D004654 ORTHO05D005414 5.1e-10 68.9 198 35.9
CANSAT78G0950 Cannabis sativa HOM05D004654 ORTHO05D005414 5.1e-10 68.9 193 35.8
Carub.0002s1154 Capsella rubella HOM05D004654 ORTHO05D005414 6.7e-10 68.6 190 32.1
Lsat_1_v5_gn_3_68821 Lactuca sativa HOM05D004654 ORTHO05D005414 6.7e-10 68.6 149 36.2
Aqoxy5G02573 Aquilegia oxysepala HOM05D004654 ORTHO05D005414 8.7e-10 68.2 191 33.0
CiPaw.07G102900 Carya illinoinensis HOM05D004654 ORTHO05D005414 8.7e-10 68.2 214 35.0
BolC6t39010H Brassica oleracea HOM05D004654 ORTHO05D005414 1.1e-09 67.8 193 35.8
CiPaw.03G008900 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.1e-09 67.8 183 37.7
AL2G22850 Arabidopsis lyrata HOM05D004654 ORTHO05D005414 1.5e-09 67.4 78 53.8
CARHR057580 Cardamine hirsuta HOM05D004654 ORTHO05D005414 1.9e-09 67.0 175 34.3
Gohir.D08G048300 Gossypium hirsutum HOM05D004654 ORTHO05D005414 2.5e-09 66.6 82 53.7
Gorai.004G047800 Gossypium raimondii HOM05D004654 ORTHO05D005414 2.5e-09 66.6 82 53.7
Medtr3g064040 Medicago truncatula HOM05D004654 ORTHO05D005414 2.5e-09 66.6 196 30.6
VMungo0540G1596 Vigna mungo HOM05D004654 ORTHO05D005414 2.5e-09 66.6 196 34.2
Duzib138G0480 Durio zibethinus HOM05D004654 ORTHO05D005414 3.3e-09 66.2 81 53.1
MD09G1282600 Malus domestica HOM05D004654 ORTHO05D005414 3.3e-09 66.2 197 34.0
COL.COLO4_00809 Corchorus olitorius HOM05D004654 ORTHO05D005414 4.3e-09 65.9 148 39.2
MD17G1272400 Malus domestica HOM05D004654 ORTHO05D005414 4.3e-09 65.9 217 33.2
DCAR_000947 Daucus carota HOM05D004654 ORTHO05D005414 5.7e-09 65.5 78 47.4
AT1G65720 Arabidopsis thaliana HOM05D004654 ORTHO05D005414 7.4e-09 65.1 78 52.6
Thecc.04G056200 Theobroma cacao HOM05D004654 ORTHO05D005414 7.4e-09 65.1 64 57.8
DCAR_014130 Daucus carota HOM05D004654 ORTHO05D005414 9.7e-09 64.7 157 36.3
Glyma.11G204100 Glycine max HOM05D004654 ORTHO05D005414 9.7e-09 64.7 74 52.7
Prupe.3G011600 Prunus persica HOM05D004654 ORTHO05D005414 9.7e-09 64.7 186 34.9
QL02p056026 Quercus lobata HOM05D004654 ORTHO05D005414 9.7e-09 64.7 202 35.6
Sp5g20670 Schrenkiella parvula HOM05D004654 ORTHO05D005414 9.7e-09 64.7 200 32.5
CiPaw.03G260700 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.3e-08 64.3 126 42.1
Eucgr.F02926 Eucalyptus grandis HOM05D004654 ORTHO05D005414 1.3e-08 64.3 80 52.5
Thhalv10019176m.g Eutrema salsugineum HOM05D004654 ORTHO05D005414 1.3e-08 64.3 184 35.9
Phvul.006G084100 Phaseolus vulgaris HOM05D004654 ORTHO05D005414 1.3e-08 64.3 82 50.0
C06p39170 Brassica napus HOM05D004654 ORTHO05D005414 1.6e-08 63.9 193 35.2
CiPaw.13G067300 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.6e-08 63.9 207 33.3
Lj6g0008387 Lotus japonicus HOM05D004654 ORTHO05D005414 2.2e-08 63.5 151 33.8
QL02p054970 Quercus lobata HOM05D004654 ORTHO05D005414 2.2e-08 63.5 155 35.5
BcaC03g14719 Brassica carinata HOM05D004654 ORTHO05D005414 3.7e-08 62.8 83 48.2
C02p21610 Brassica napus HOM05D004654 ORTHO05D005414 3.7e-08 62.8 83 48.2
Gorai.008G054900 Gossypium raimondii HOM05D004654 ORTHO05D005414 3.7e-08 62.8 144 38.2
Gohir.D12G051600 Gossypium hirsutum HOM05D004654 ORTHO05D005414 4.8e-08 62.4 144 38.2
BolC2t08298H Brassica oleracea HOM05D004654 ORTHO05D005414 6.3e-08 62.0 182 35.7
CDE07G1822 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 6.3e-08 62.0 139 36.7
Haze_14051 Corylus avellana HOM05D004654 ORTHO05D005414 6.3e-08 62.0 191 37.2
Lalb_Chr17g0345801 Lupinus albus HOM05D004654 ORTHO05D005414 6.3e-08 62.0 148 35.1
CDE04G3704 Ceratophyllum demersum HOM05D004654 ORTHO05D005414 1.1e-07 61.2 138 40.6
Ca_15106_v3 Cicer arietinum L. HOM05D004654 ORTHO05D005414 1.1e-07 61.2 185 30.3
Gohir.A12G053100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 1.4e-07 60.8 144 36.8
Hma1.2p1_0034F.1_g021540 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 1.8e-07 60.5 161 33.5
Psat5g143960 Pisum sativum HOM05D004654 ORTHO05D005414 2.4e-07 60.1 176 32.4
TPR.G37307 Trifolium pratense HOM05D004654 ORTHO05D005414 2.4e-07 60.1 104 38.5
Sc09g0004620 Simmondsia chinensis HOM05D004654 ORTHO05D005414 3.1e-07 59.7 209 34.4
FAN23G2643 Fragaria x ananassa HOM05D004654 ORTHO05D005414 4.1e-07 59.3 152 36.2
Peaxi162Scf00784g00044 Petunia axillaris HOM05D004654 ORTHO05D005414 5.3e-07 58.9 80 48.8
MBI03_g34062_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 6.9e-07 58.5 136 36.8
EL10Ac4g08895 Beta vulgaris HOM05D004654 ORTHO05D005414 9.0e-07 58.2 105 42.9
Gohir.A04G103050 Gossypium hirsutum HOM05D004654 ORTHO05D005414 9.0e-07 58.2 40 65.0
Lj5C23T4 Lonicera japonica HOM05D004654 ORTHO05D005414 9.0e-07 58.2 53 56.6
MBI06_g28670_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 9.0e-07 58.2 90 40.0
MELO3C020251.2 Cucumis melo HOM05D004654 ORTHO05D005414 1.2e-06 57.8 147 36.1
MBI03_g05124_MAGBIO Magnolia biondii HOM05D004654 ORTHO05D005414 1.2e-06 57.8 136 36.8
THA.LOC104823831 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.2e-06 57.8 201 31.8
arahy.Tifrunner.gnm1.ann1.RSI5EI Arachis hypogaea HOM05D004654 ORTHO05D005414 1.5e-06 57.4 118 38.1
ClCG05G011320 Citrullus lanatus HOM05D004654 ORTHO05D005414 1.5e-06 57.4 204 30.9
Lalb_Chr10g0103991 Lupinus albus HOM05D004654 ORTHO05D005414 1.5e-06 57.4 38 68.4
Nn4g24900 Nelumbo nucifera HOM05D004654 ORTHO05D005414 1.5e-06 57.4 50 56.0
PSO782G3544 Papaver somniferum HOM05D004654 ORTHO05D005414 1.5e-06 57.4 178 34.8
Ah.04g162850 Amaranthus hybridus HOM05D004654 ORTHO05D005414 2.0e-06 57.0 158 32.9
PSO566G0049 Papaver somniferum HOM05D004654 ORTHO05D005414 2.0e-06 57.0 179 36.3
PSO566G0349 Papaver somniferum HOM05D004654 ORTHO05D005414 2.0e-06 57.0 179 36.3
TAR374G0741 Trochodendron aralioides HOM05D004654 ORTHO05D005414 2.0e-06 57.0 165 37.0
TAR622G1006 Trochodendron aralioides HOM05D004654 ORTHO05D005414 2.0e-06 57.0 40 65.0
ATR0618G257 Amborella trichopoda HOM05D004654 ORTHO05D005414 2.6e-06 56.6 50 50.0
Sed0014762 Sechium edule HOM05D004654 ORTHO05D005414 2.6e-06 56.6 52 59.6
CsaV3_3G021140 Cucumis sativus L. HOM05D004654 ORTHO05D005414 3.4e-06 56.2 147 35.4
Lalb_Chr20g0117181 Lupinus albus HOM05D004654 ORTHO05D005414 4.5e-06 55.8 233 31.8
A02p13350 Brassica napus HOM05D004654 ORTHO05D005414 1.0e-05 54.7 78 46.2
BraA02t06392Z Brassica rapa HOM05D004654 ORTHO05D005414 1.0e-05 54.7 78 46.2


User provided reference genes

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