Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15651 Utricularia gibba HOM05D005534 ORTHO05D006642 4.8e-54 214.2 102 100.0
Migut.J01545 Erythranthe guttata HOM05D005534 ORTHO05D006642 8.0e-25 117.1 84 70.2
Oeu034751.1 Olea europaea HOM05D005534 ORTHO05D006642 1.0e-24 116.7 82 67.1
Oeu034752.2 Olea europaea HOM05D005534 ORTHO05D006642 1.0e-24 116.7 82 67.1
Cc00_g25290 Coffea canephora HOM05D005534 ORTHO05D006642 4.0e-24 114.8 80 68.8
Sc19g0002770 Simmondsia chinensis HOM05D005534 ORTHO05D006642 5.2e-24 114.4 92 64.1
MSTRG.6297 Avicennia marina HOM05D005534 ORTHO05D006642 1.2e-23 113.2 82 64.6
SalBow6G6434 Salvia bowleyana HOM05D005534 ORTHO05D006642 1.2e-23 113.2 82 63.4
Dinv18373 Davidia involucrata HOM05D005534 ORTHO05D006642 2.2e-22 109.0 65 81.5
MELO3C022197.2 Cucumis melo HOM05D005534 ORTHO05D006642 3.7e-22 108.2 56 87.5
Thecc.08G173200 Theobroma cacao HOM05D005534 ORTHO05D006642 1.4e-21 106.3 56 87.5
CAN.G911.34 Capsicum annuum HOM05D005534 ORTHO05D006642 2.4e-21 105.5 67 74.6
Nn1g07947 Nelumbo nucifera HOM05D005534 ORTHO05D006642 2.4e-21 105.5 68 75.0
Potri.013G101700 Populus trichocarpa HOM05D005534 ORTHO05D006642 2.4e-21 105.5 55 87.3
CsaV3_5G040210 Cucumis sativus L. HOM05D005534 ORTHO05D006642 3.1e-21 105.1 55 87.3
TAR381G0138 Trochodendron aralioides HOM05D005534 ORTHO05D006642 3.1e-21 105.1 69 73.9
ClCG08G000650 Citrullus lanatus HOM05D005534 ORTHO05D006642 4.1e-21 104.8 55 87.3
Rhsim12G0004300 Rhododendron simsii HOM05D005534 ORTHO05D006642 4.1e-21 104.8 56 85.7
PGSC0003DMG401019416 Solanum tuberosum HOM05D005534 ORTHO05D006642 5.4e-21 104.4 67 73.1
Manes.18G119700 Manihot esculenta HOM05D005534 ORTHO05D006642 9.2e-21 103.6 71 69.0
CSS0044704 Camellia sinensis var. sinensis HOM05D005534 ORTHO05D006642 1.2e-20 103.2 55 87.3
Haze_13929 Corylus avellana HOM05D005534 ORTHO05D006642 1.2e-20 103.2 69 72.5
QL09p004039 Quercus lobata HOM05D005534 ORTHO05D006642 1.2e-20 103.2 55 87.3
Sed0013677 Sechium edule HOM05D005534 ORTHO05D006642 1.2e-20 103.2 56 82.1
Sopen10g005920 Solanum pennellii HOM05D005534 ORTHO05D006642 1.6e-20 102.8 78 64.1
Ciclev10020832m.g Citrus clementina HOM05D005534 ORTHO05D006642 2.0e-20 102.4 68 72.1
Eucgr.F04073 Eucalyptus grandis HOM05D005534 ORTHO05D006642 2.7e-20 102.1 54 87.0
DCAR_022334 Daucus carota HOM05D005534 ORTHO05D006642 3.5e-20 101.7 60 78.3
Duzib177G1161 Durio zibethinus HOM05D005534 ORTHO05D006642 4.5e-20 101.3 54 87.0
Duzib177G1179 Durio zibethinus HOM05D005534 ORTHO05D006642 4.5e-20 101.3 54 87.0
PGR044G1073 Punica granatum HOM05D005534 ORTHO05D006642 4.5e-20 101.3 58 81.0
Nitab4.5_0000731g0130 Nicotiana tabacum HOM05D005534 ORTHO05D006642 7.8e-20 100.5 67 70.1
Nitab4.5_0006008g0020 Nicotiana tabacum HOM05D005534 ORTHO05D006642 7.8e-20 100.5 67 70.1
Atru.chr13.2420 Acer truncatum HOM05D005534 ORTHO05D006642 1.0e-19 100.1 61 78.7
Aqoxy2G03821 Aquilegia oxysepala HOM05D005534 ORTHO05D006642 1.0e-19 100.1 55 83.6
MD15G1399100 Malus domestica HOM05D005534 ORTHO05D006642 1.3e-19 99.8 64 71.9
Prupe.1G530500 Prunus persica HOM05D005534 ORTHO05D006642 1.3e-19 99.8 69 68.1
GSVIVG01036434001 Vitis vinifera HOM05D005534 ORTHO05D006642 1.3e-19 99.8 55 83.6
Solyc10g012160.3 Solanum lycopersicum HOM05D005534 ORTHO05D006642 1.7e-19 99.4 67 68.7
Hund26700 Selenicereus undatus HOM05D005534 ORTHO05D006642 2.3e-19 99.0 66 72.7
HPP92_005621 Vanilla planifolia HOM05D005534 ORTHO05D006642 2.3e-19 99.0 67 70.1
Actinidia23022 Actinidia chinensis HOM05D005534 ORTHO05D006642 2.9e-19 98.6 72 66.7
CiPaw.04G011000 Carya illinoinensis HOM05D005534 ORTHO05D006642 2.9e-19 98.6 55 80.0
TWI18G0032 Tripterygium wilfordii HOM05D005534 ORTHO05D006642 3.8e-19 98.2 55 81.8
FvH4_5g33060 Fragaria vesca HOM05D005534 ORTHO05D006642 5.0e-19 97.8 69 65.2
FAN08G1090 Fragaria x ananassa HOM05D005534 ORTHO05D006642 5.0e-19 97.8 69 65.2
Gohir.A13G117500 Gossypium hirsutum HOM05D005534 ORTHO05D006642 5.0e-19 97.8 54 83.3
Gohir.D13G120700 Gossypium hirsutum HOM05D005534 ORTHO05D006642 5.0e-19 97.8 54 83.3
Gorai.013G134900 Gossypium raimondii HOM05D005534 ORTHO05D006642 5.0e-19 97.8 54 83.3
MD08G1215200 Malus domestica HOM05D005534 ORTHO05D006642 8.6e-19 97.1 78 61.5
RcHm_v2.0_Chr7g0231231 Rosa chinensis HOM05D005534 ORTHO05D006642 8.6e-19 97.1 71 63.4
EL10Ac1g01529 Beta vulgaris HOM05D005534 ORTHO05D006642 1.1e-18 96.7 65 70.8
Gohir.A13G117400 Gossypium hirsutum HOM05D005534 ORTHO05D006642 1.5e-18 96.3 54 81.5
arahy.Tifrunner.gnm1.ann1.A8RPUL Arachis hypogaea HOM05D005534 ORTHO05D006642 1.9e-18 95.9 65 73.8
arahy.Tifrunner.gnm1.ann1.H1ATJ8 Arachis hypogaea HOM05D005534 ORTHO05D006642 1.9e-18 95.9 65 73.8
CDE02G4760 Ceratophyllum demersum HOM05D005534 ORTHO05D006642 1.9e-18 95.9 56 78.6
MD04G1240000 Malus domestica HOM05D005534 ORTHO05D006642 2.5e-18 95.5 78 60.3
CANSAT25G1946 Cannabis sativa HOM05D005534 ORTHO05D006642 4.3e-18 94.7 71 67.6
AUR62026718 Chenopodium quinoa HOM05D005534 ORTHO05D006642 4.3e-18 94.7 92 53.3
Lsat_1_v5_gn_5_78481 Lactuca sativa HOM05D005534 ORTHO05D006642 1.2e-17 93.2 69 68.1
COL.COLO4_05589 Corchorus olitorius HOM05D005534 ORTHO05D006642 1.6e-17 92.8 58 79.3
Medtr3g005730 Medicago truncatula HOM05D005534 ORTHO05D006642 1.6e-17 92.8 61 70.5
AL1G36350 Arabidopsis lyrata HOM05D005534 ORTHO05D006642 2.8e-17 92.0 58 77.6
ECA234G3974 Erigeron canadensis HOM05D005534 ORTHO05D006642 2.8e-17 92.0 69 65.2
Carub.0001s2231 Capsella rubella HOM05D005534 ORTHO05D006642 4.7e-17 91.3 71 67.6
Ca_13980_v3 Cicer arietinum L. HOM05D005534 ORTHO05D006642 4.7e-17 91.3 55 74.5
AT1G22800 Arabidopsis thaliana HOM05D005534 ORTHO05D006642 6.1e-17 90.9 70 67.1
A09p41950 Brassica napus HOM05D005534 ORTHO05D006642 6.1e-17 90.9 58 75.9
BraA09t39683Z Brassica rapa HOM05D005534 ORTHO05D006642 6.1e-17 90.9 58 75.9
CARHR023160 Cardamine hirsuta HOM05D005534 ORTHO05D006642 6.1e-17 90.9 70 67.1
BcaNung06443 Brassica carinata HOM05D005534 ORTHO05D006642 8.0e-17 90.5 58 75.9
Glyma.04G257200 Glycine max HOM05D005534 ORTHO05D006642 8.0e-17 90.5 65 69.2
Glyma.12G242500 Glycine max HOM05D005534 ORTHO05D006642 8.0e-17 90.5 65 69.2
Thhalv10007396m.g Eutrema salsugineum HOM05D005534 ORTHO05D006642 1.0e-16 90.1 58 75.9
Lj3g0019199 Lotus japonicus HOM05D005534 ORTHO05D006642 1.0e-16 90.1 67 62.7
PSO017G6214 Papaver somniferum HOM05D005534 ORTHO05D006642 1.4e-16 89.7 68 63.2
PSO170G0367 Papaver somniferum HOM05D005534 ORTHO05D006642 1.4e-16 89.7 68 63.2
BcaNung06107 Brassica carinata HOM05D005534 ORTHO05D006642 1.8e-16 89.4 56 78.6
C05p21900 Brassica napus HOM05D005534 ORTHO05D006642 1.8e-16 89.4 56 78.6
BolC5t30885H Brassica oleracea HOM05D005534 ORTHO05D006642 1.8e-16 89.4 56 78.6
Lalb_Chr07g0177551 Lupinus albus HOM05D005534 ORTHO05D006642 1.8e-16 89.4 54 75.9
Psat1g000160 Pisum sativum HOM05D005534 ORTHO05D006642 1.8e-16 89.4 74 56.8
ATR0681G326 Amborella trichopoda HOM05D005534 ORTHO05D006642 3.0e-16 88.6 54 70.4
Aa31LG7G6790 Aethionema arabicum HOM05D005534 ORTHO05D006642 5.2e-16 87.8 70 65.7
Sp1g20290 Schrenkiella parvula HOM05D005534 ORTHO05D006642 5.2e-16 87.8 70 65.7
Phvul.005G001600 Phaseolus vulgaris HOM05D005534 ORTHO05D006642 6.8e-16 87.4 63 61.9
VMungo1080G0932 Vigna mungo HOM05D005534 ORTHO05D006642 6.8e-16 87.4 63 63.5
Zm00001eb411080 Zea mays HOM05D005534 ORTHO05D006642 6.8e-16 87.4 53 73.6
THA.LOC104800087 Tarenaya hassleriana HOM05D005534 ORTHO05D006642 8.9e-16 87.0 77 55.8
TPR.G25542 Trifolium pratense HOM05D005534 ORTHO05D006642 2.0e-15 85.9 55 72.7
SEGI_02632 Sequoiadendron giganteum HOM05D005534 ORTHO05D006642 9.8e-15 83.6 51 76.5
Os12g0203100 Oryza sativa ssp. japonica HOM05D005534 ORTHO05D006642 2.2e-14 82.4 53 69.8
Lj1A290G37 Lonicera japonica HOM05D005534 ORTHO05D006642 2.9e-14 82.0 72 62.5
Lj1E297T0 Lonicera japonica HOM05D005534 ORTHO05D006642 1.1e-13 80.1 56 71.4
QL09p002970 Quercus lobata HOM05D005534 ORTHO05D006642 1.8e-13 79.3 40 87.5
Pp3c3_32560 Physcomitrium patens HOM05D005534 ORTHO05D006642 5.4e-13 77.8 52 71.2
MBI06_g06677_MAGBIO Magnolia biondii HOM05D005534 ORTHO05D006642 2.7e-12 75.5 48 70.8
Mapoly0125s0040 Marchantia polymorpha HOM05D005534 ORTHO05D006642 2.7e-12 75.5 50 70.0
Peaxi162Scf00065g00017 Petunia axillaris HOM05D005534 ORTHO05D006642 2.7e-12 75.5 79 50.6
vmacro00924 Vaccinium macrocarpon HOM05D005534 ORTHO05D006642 2.7e-12 75.5 48 68.8
CAN.G1062.3 Capsicum annuum HOM05D005534 ORTHO05D006642 3.5e-12 75.1 59 64.4
HPP92_005611 Vanilla planifolia HOM05D000010 ORTHO05D429468 6.0e-12 74.3 56 64.3
AagrBONN_evm.TU.Sc2ySwM_117.1319 Anthoceros agrestis HOM05D005534 ORTHO05D006642 1.0e-11 73.6 52 65.4
TPR.G30727 Trifolium pratense HOM05D005534 ORTHO05D006642 2.5e-10 68.9 61 60.7
Potri.013G101900 Populus trichocarpa HOM05D005534 ORTHO05D006642 5.6e-10 67.8 33 87.9
CBR_g29440 Chara braunii HOM05D000921 ORTHO05D004153 5.2e-08 61.2 53 54.7
SMO232G0033 Selaginella moellendorffii HOM05D005534 ORTHO05D006642 4.4e-07 58.2 52 53.8
Cpa.g.sc438.5 Carica papaya HOM05D005534 ORTHO05D006642 3.7e-06 55.1 78 41.0
Cre13.g584750 Chlamydomonas reinhardtii HOM05D005534 ORTHO05D006642 3.7e-06 55.1 52 51.9
AUR62013571 Chenopodium quinoa HOM05D005534 ORTHO05D006642 8.3e-06 53.9 30 73.3


User provided reference genes

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