Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 2.5e-141 505.4 246 100.0
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 3.1e-22 109.8 125 48.0
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.5e-21 107.5 134 50.0
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 2.0e-21 107.1 135 48.1
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 3.4e-21 106.3 143 42.7
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 4.5e-21 105.9 129 46.5
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 4.5e-21 105.9 136 46.3
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 1.3e-20 104.4 128 48.4
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 1.7e-20 104.0 127 47.2
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 2.2e-20 103.6 126 46.0
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 2.9e-20 103.2 127 48.0
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 2.9e-20 103.2 127 48.0
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 3.8e-20 102.8 144 43.1
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 1.1e-19 101.3 136 47.8
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 1.1e-19 101.3 133 44.4
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 1.9e-19 100.5 135 42.2
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 1.9e-19 100.5 138 42.8
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 2.4e-19 100.1 140 43.6
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 3.2e-19 99.8 136 42.6
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 4.2e-19 99.4 134 44.0
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 5.4e-19 99.0 137 40.1
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 7.1e-19 98.6 135 45.2
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 7.1e-19 98.6 136 41.9
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 7.1e-19 98.6 122 45.9
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 9.3e-19 98.2 145 41.4
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 9.3e-19 98.2 144 42.4
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 2.1e-18 97.1 131 45.0
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 3.5e-18 96.3 137 39.4
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 3.5e-18 96.3 137 46.0
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 3.5e-18 96.3 137 40.1
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 3.5e-18 96.3 135 43.7
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 3.5e-18 96.3 121 47.9
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 4.6e-18 95.9 123 48.0
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 6.0e-18 95.5 137 45.3
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 6.0e-18 95.5 127 47.2
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 1.0e-17 94.7 136 43.4
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.3e-17 94.4 136 41.9
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 1.3e-17 94.4 121 47.9
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 1.3e-17 94.4 140 39.3
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 1.3e-17 94.4 121 47.1
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 2.3e-17 93.6 135 40.0
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 2.3e-17 93.6 129 43.4
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 2.3e-17 93.6 135 42.2
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 3.0e-17 93.2 127 42.5
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 3.0e-17 93.2 122 45.9
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 3.0e-17 93.2 141 41.1
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 3.9e-17 92.8 108 45.4
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 3.9e-17 92.8 123 47.2
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 3.9e-17 92.8 123 47.2
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 3.9e-17 92.8 121 46.3
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 3.9e-17 92.8 144 38.9
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 5.1e-17 92.4 136 42.6
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 6.7e-17 92.0 123 46.3
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 8.7e-17 91.7 130 41.5
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 1.1e-16 91.3 123 46.3
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 1.5e-16 90.9 121 47.1
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 1.9e-16 90.5 122 45.1
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 2.5e-16 90.1 142 41.5
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 3.3e-16 89.7 123 45.5
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 4.3e-16 89.4 149 40.3
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 4.3e-16 89.4 140 37.9
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 4.3e-16 89.4 137 42.3
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 4.3e-16 89.4 139 40.3
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 5.6e-16 89.0 141 41.1
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.6e-16 89.0 137 37.2
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.6e-16 89.0 137 40.1
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 5.6e-16 89.0 130 40.0
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 5.6e-16 89.0 137 40.1
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 7.4e-16 88.6 112 47.3
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 7.4e-16 88.6 112 47.3
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 7.4e-16 88.6 130 40.0
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 7.4e-16 88.6 125 41.6
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 7.4e-16 88.6 125 41.6
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 1.3e-15 87.8 137 40.1
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 1.6e-15 87.4 122 45.9
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 1.6e-15 87.4 147 37.4
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 2.1e-15 87.0 134 40.3
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 2.1e-15 87.0 143 39.2
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 3.6e-15 86.3 121 43.0
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 6.2e-15 85.5 134 36.6
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 6.2e-15 85.5 134 36.6
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 8.1e-15 85.1 135 41.5
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.1e-14 84.7 128 41.4
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.1e-14 84.7 116 40.5
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.4e-14 84.3 109 45.9
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 2.4e-14 83.6 138 37.7
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 3.1e-14 83.2 137 38.7
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 3.1e-14 83.2 136 37.5
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 5.3e-14 82.4 139 38.8
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 9.0e-14 81.6 129 38.8
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 1.2e-13 81.3 126 39.7
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 1.2e-13 81.3 142 38.7
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.5e-13 80.9 130 40.0
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 1.5e-13 80.9 135 40.0
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.0e-13 80.5 128 41.4
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 2.0e-13 80.5 138 37.7
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 2.0e-13 80.5 140 38.6
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.0e-13 80.5 138 34.1
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 2.6e-13 80.1 132 42.4
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 2.6e-13 80.1 115 40.0
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 3.4e-13 79.7 115 44.3
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 7.6e-13 78.6 124 41.1
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 7.6e-13 78.6 107 42.1
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 9.9e-13 78.2 123 41.5
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 1.3e-12 77.8 146 37.7
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 1.3e-12 77.8 124 37.9
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 1.3e-12 77.8 140 36.4
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 1.7e-12 77.4 136 39.0
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 1.7e-12 77.4 144 36.8
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 1.7e-12 77.4 101 42.6
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 2.2e-12 77.0 133 42.1
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 1.1e-11 74.7 143 37.1
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 1.1e-11 74.7 148 35.8
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 1.4e-11 74.3 117 36.8
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.9e-11 73.9 141 38.3
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.4e-11 73.6 143 36.4
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 3.2e-11 73.2 122 32.8
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 7.1e-11 72.0 123 36.6
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 7.1e-11 72.0 153 32.0
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 7.1e-11 72.0 137 35.8
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 7.1e-11 72.0 116 40.5
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.2e-10 71.2 115 41.7
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 1.2e-10 71.2 146 34.2
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 1.6e-10 70.9 136 33.1
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 2.1e-10 70.5 139 40.3
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 4.6e-10 69.3 89 42.7
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.6e-10 69.3 152 31.6
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 4.6e-10 69.3 126 34.1
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 6.0e-10 68.9 123 40.7
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 7.9e-10 68.6 125 33.6
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.3e-09 67.8 137 32.1
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 1.8e-09 67.4 100 39.0
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 2.3e-09 67.0 127 35.4
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.0e-09 66.6 114 38.6
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.0e-09 66.6 155 31.6
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 3.0e-09 66.6 52 65.4
unitig_747.g21673 Utricularia gibba HOM05D004108 ORTHO05D004849 3.9e-09 66.2 101 41.6
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 5.1e-09 65.9 152 32.9
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 8.7e-09 65.1 125 36.8
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 1.5e-08 64.3 108 35.2
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 1.5e-08 64.3 108 35.2
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.9e-08 63.9 128 34.4
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 2.5e-08 63.5 50 62.0
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.5e-08 63.5 122 31.1
Peaxi162Scf00303g00058 Petunia axillaris HOM05D004108 ORTHO05D004849 3.3e-08 63.2 88 40.9
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 4.3e-08 62.8 134 33.6
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 7.4e-08 62.0 153 30.1
AUR62014477 Chenopodium quinoa HOM05D004108 ORTHO05D004849 1.3e-07 61.2 52 59.6
Mapoly0087s0045 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.3e-07 61.2 141 31.2
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.6e-07 60.8 138 31.2
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 1.6e-07 60.8 121 34.7
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 2.8e-07 60.1 53 56.6
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 2.8e-07 60.1 126 29.4
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.7e-07 59.7 138 32.6
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 6.2e-07 58.9 135 33.3
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 8.1e-07 58.5 139 30.2
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.4e-06 57.8 125 29.6
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 1.8e-06 57.4 140 30.7
Glyma.18G124300 Glycine max HOM05D004108 ORTHO05D004849 1.8e-06 57.4 107 33.6
PGSC0003DMG400005376 Solanum tuberosum HOM05D004108 ORTHO05D004849 4.0e-06 56.2 104 34.6


User provided reference genes

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