Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15615 Utricularia gibba HOM05D000174 ORTHO05D001526 1.1e-161 573.2 281 100.0
Cpa.g.sc20.205 Carica papaya HOM05D000174 ORTHO05D001526 2.6e-25 120.2 260 39.6
COL.COLO4_17932 Corchorus olitorius HOM05D000174 ORTHO05D001526 2.6e-25 120.2 325 32.9
Duzib132G0848 Durio zibethinus HOM05D000174 ORTHO05D001526 2.9e-24 116.7 250 39.6
Eucgr.I01518 Eucalyptus grandis HOM05D000174 ORTHO05D001526 4.9e-24 115.9 271 35.8
Haze_02015 Corylus avellana HOM05D000174 ORTHO05D001526 1.1e-23 114.8 317 37.2
Lj5P172T80 Lonicera japonica HOM05D000174 ORTHO05D001526 5.4e-23 112.5 251 39.4
Cc10_g04030 Coffea canephora HOM05D000174 ORTHO05D001526 7.1e-23 112.1 301 34.2
Gohir.A01G175000 Gossypium hirsutum HOM05D000174 ORTHO05D001526 7.1e-23 112.1 246 37.4
Thecc.02G044700 Theobroma cacao HOM05D000174 ORTHO05D001526 7.1e-23 112.1 292 36.0
Carub.0003s3112 Capsella rubella HOM05D000174 ORTHO05D001526 9.3e-23 111.7 230 38.7
Gohir.D01G166100 Gossypium hirsutum HOM05D000174 ORTHO05D001526 9.3e-23 111.7 246 36.6
QL11p055621 Quercus lobata HOM05D000174 ORTHO05D001526 1.2e-22 111.3 298 34.6
QL11p055917 Quercus lobata HOM05D000174 ORTHO05D001526 1.2e-22 111.3 298 34.6
AL3G50040 Arabidopsis lyrata HOM05D000174 ORTHO05D001526 2.1e-22 110.5 232 37.5
Hma1.2p1_0032F.1_g018690 Hydrangea macrophylla HOM05D000174 ORTHO05D001526 2.1e-22 110.5 279 36.2
Duzib248G0614 Durio zibethinus HOM05D000174 ORTHO05D001526 2.7e-22 110.2 248 37.9
Gorai.002G206600 Gossypium raimondii HOM05D000174 ORTHO05D001526 2.7e-22 110.2 246 36.2
Peaxi162Scf00263g00147 Petunia axillaris HOM05D000174 ORTHO05D001526 2.7e-22 110.2 213 41.3
Actinidia20568 Actinidia chinensis HOM05D000174 ORTHO05D001526 3.5e-22 109.8 196 41.3
vmacro17301 Vaccinium macrocarpon HOM05D000174 ORTHO05D001526 7.8e-22 108.6 215 40.0
Aa31LG2G14820 Aethionema arabicum HOM05D000174 ORTHO05D001526 1.3e-21 107.8 199 39.7
CANSAT56G2339 Cannabis sativa HOM05D000174 ORTHO05D001526 1.7e-21 107.5 248 36.3
HanXRQChr12g0374431 Helianthus annuus HOM05D000174 ORTHO05D001526 1.7e-21 107.5 239 37.7
Oeu051846.1 Olea europaea HOM05D001927 ORTHO05D001972 1.7e-21 107.5 304 33.9
TWI79G0030 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 1.7e-21 107.5 193 37.8
AT2G17180 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 2.3e-21 107.1 227 38.3
Duzib052G0399 Durio zibethinus HOM05D000174 ORTHO05D001526 3.0e-21 106.7 250 37.2
PGSC0003DMG401000796 Solanum tuberosum HOM05D000174 ORTHO05D001526 3.0e-21 106.7 207 38.6
C07p61070 Brassica napus HOM05D000174 ORTHO05D001526 3.9e-21 106.3 240 37.5
Nitab4.5_0000032g0420 Nicotiana tabacum HOM05D000174 ORTHO05D001526 3.9e-21 106.3 224 38.4
Oeu015527.1 Olea europaea HOM05D000174 ORTHO05D001526 3.9e-21 106.3 267 35.2
Oeu015529.1 Olea europaea HOM05D000174 ORTHO05D001526 3.9e-21 106.3 267 35.2
BcaNung02386 Brassica carinata HOM05D000174 ORTHO05D001526 5.1e-21 105.9 240 37.5
BolC7t46532H Brassica oleracea HOM05D000174 ORTHO05D001526 5.1e-21 105.9 240 37.5
BraA03t15420Z Brassica rapa HOM05D000174 ORTHO05D001526 5.1e-21 105.9 239 37.2
CARHR293490 Cardamine hirsuta HOM05D000174 ORTHO05D001526 6.6e-21 105.5 297 34.3
DCAR_006286 Daucus carota HOM05D000174 ORTHO05D001526 6.6e-21 105.5 215 38.1
CANSAT56G1055 Cannabis sativa HOM05D000174 ORTHO05D001526 8.7e-21 105.1 212 38.2
CDE04G0195 Ceratophyllum demersum HOM05D001852 ORTHO05D001989 8.7e-21 105.1 217 36.4
AT4G35280 Arabidopsis thaliana HOM05D000174 ORTHO05D001526 1.1e-20 104.8 202 37.1
Hma1.2p1_0032F.1_g018820 Hydrangea macrophylla HOM05D000174 ORTHO05D001526 1.1e-20 104.8 275 33.8
arahy.Tifrunner.gnm1.ann1.DV6FW6 Arachis hypogaea HOM05D000174 ORTHO05D001526 1.5e-20 104.4 295 34.6
A03p63500 Brassica napus HOM05D000174 ORTHO05D001526 1.9e-20 104.0 239 37.2
CARHR243600 Cardamine hirsuta HOM05D000174 ORTHO05D001526 1.9e-20 104.0 242 35.5
Ciclev10030233m.g Citrus clementina HOM05D000174 ORTHO05D001526 1.9e-20 104.0 248 37.9
Dinv41879 Davidia involucrata HOM05D000174 ORTHO05D001526 1.9e-20 104.0 245 35.9
Thhalv10025912m.g Eutrema salsugineum HOM05D000174 ORTHO05D001526 1.9e-20 104.0 217 37.8
CDE02G3608 Ceratophyllum demersum HOM05D000174 ORTHO05D001526 4.3e-20 102.8 236 35.6
Lj9P406T21 Lonicera japonica HOM05D000174 ORTHO05D001526 4.3e-20 102.8 234 36.3
BcaNung00612 Brassica carinata HOM05D000174 ORTHO05D001526 5.6e-20 102.4 238 36.6
BraA01t00313Z Brassica rapa HOM05D000174 ORTHO05D001526 5.6e-20 102.4 238 36.6
Glyma.02G311100 Glycine max HOM05D000174 ORTHO05D001526 5.6e-20 102.4 260 34.2
Nitab4.5_0007754g0010 Nicotiana tabacum HOM05D000174 ORTHO05D001526 5.6e-20 102.4 233 36.5
PSO478G0578 Papaver somniferum HOM05D000174 ORTHO05D001526 5.6e-20 102.4 293 32.1
Rhsim11G0197100 Rhododendron simsii HOM05D000174 ORTHO05D001526 5.6e-20 102.4 221 35.7
Sp7g33060 Schrenkiella parvula HOM05D000174 ORTHO05D001526 5.6e-20 102.4 237 36.7
A01p03280 Brassica napus HOM05D000174 ORTHO05D001526 7.3e-20 102.1 240 37.1
FAN20G1232 Fragaria x ananassa HOM05D000174 ORTHO05D001526 7.3e-20 102.1 210 39.0
AL7G15890 Arabidopsis lyrata HOM05D000174 ORTHO05D001526 9.6e-20 101.7 237 36.3
arahy.Tifrunner.gnm1.ann1.PC1F1T Arachis hypogaea HOM05D000174 ORTHO05D001526 1.6e-19 100.9 294 34.0
CiPaw.06G116500 Carya illinoinensis HOM05D000174 ORTHO05D001526 1.6e-19 100.9 322 31.7
Sc08g0002310 Simmondsia chinensis HOM05D000174 ORTHO05D001526 2.1e-19 100.5 241 36.1
Thhalv10023020m.g Eutrema salsugineum HOM05D000174 ORTHO05D001526 3.6e-19 99.8 237 38.4
MD05G1134500 Malus domestica HOM05D000174 ORTHO05D001526 3.6e-19 99.8 211 36.0
TWI75G1586 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 3.6e-19 99.8 192 39.1
Manes.08G058500 Manihot esculenta HOM05D000174 ORTHO05D001526 4.8e-19 99.4 200 36.5
Rhsim05G0047500 Rhododendron simsii HOM05D000174 ORTHO05D001526 4.8e-19 99.4 214 38.3
RhsimUnG0141900 Rhododendron simsii HOM05D000174 ORTHO05D001526 4.8e-19 99.4 214 38.3
FvH4_2g16630 Fragaria vesca HOM05D000174 ORTHO05D001526 8.1e-19 98.6 216 38.0
Nn6g31718 Nelumbo nucifera HOM05D000174 ORTHO05D001526 8.1e-19 98.6 277 32.1
ECA246G3372 Erigeron canadensis HOM05D000174 ORTHO05D001526 1.1e-18 98.2 254 37.0
CSS0027823 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D001526 1.4e-18 97.8 271 34.3
Carub.0007s0502 Capsella rubella HOM05D000174 ORTHO05D001526 1.4e-18 97.8 215 36.7
FAN24G2331 Fragaria x ananassa HOM05D000174 ORTHO05D001526 1.8e-18 97.4 216 38.0
RcHm_v2.0_Chr6g0280711 Rosa chinensis HOM05D000174 ORTHO05D001526 1.8e-18 97.4 264 34.1
CAN.G175.1 Capsicum annuum HOM05D000174 ORTHO05D001526 4.0e-18 96.3 218 36.7
Manes.09G006400 Manihot esculenta HOM05D000174 ORTHO05D001526 4.0e-18 96.3 211 36.0
Potri.009G166200 Populus trichocarpa HOM05D000174 ORTHO05D001526 4.0e-18 96.3 207 36.7
C01p03620 Brassica napus HOM05D001927 ORTHO05D001972 5.3e-18 95.9 245 36.7
BolC1t00353H Brassica oleracea HOM05D000174 ORTHO05D001526 5.3e-18 95.9 245 36.7
PSO017G6757 Papaver somniferum HOM05D000174 ORTHO05D001526 9.0e-18 95.1 235 34.9
MD10G1139600 Malus domestica HOM05D000174 ORTHO05D001526 1.2e-17 94.7 217 37.8
Sabra04G0138600 Salix brachista HOM05D000174 ORTHO05D001526 1.2e-17 94.7 201 36.8
FAN15G2497 Fragaria x ananassa HOM05D000174 ORTHO05D001526 1.5e-17 94.4 210 37.1
THA.LOC104819687 Tarenaya hassleriana HOM05D000174 ORTHO05D001526 1.5e-17 94.4 215 36.3
Potri.004G205300 Populus trichocarpa HOM05D000174 ORTHO05D001526 3.4e-17 93.2 206 36.9
SGA_v2.0_scaffold98G29296 Striga asiatica HOM05D000174 ORTHO05D001526 4.5e-17 92.8 236 34.7
ECA233G2259 Erigeron canadensis HOM05D000174 ORTHO05D001526 5.8e-17 92.4 268 32.1
Manes.04G008800 Manihot esculenta HOM05D000174 ORTHO05D001526 7.6e-17 92.0 204 34.8
PGR142G1089 Punica granatum HOM05D000174 ORTHO05D001526 7.6e-17 92.0 237 35.4
Migut.N01353 Erythranthe guttata HOM05D000174 ORTHO05D001526 9.9e-17 91.7 253 32.8
TAR625G1147 Trochodendron aralioides HOM05D000174 ORTHO05D001526 1.7e-16 90.9 205 35.1
unitig_578.g16756 Utricularia gibba HOM05D000174 ORTHO05D001526 1.7e-16 90.9 252 33.7
TWI31G0140 Tripterygium wilfordii HOM05D000174 ORTHO05D001526 2.9e-16 90.1 285 29.5
TPR.G18627 Trifolium pratense HOM05D000174 ORTHO05D001526 3.8e-16 89.7 240 32.9
Gohir.D02G231400 Gossypium hirsutum HOM05D000174 ORTHO05D001526 4.9e-16 89.4 199 37.7
Gorai.005G259000 Gossypium raimondii HOM05D000174 ORTHO05D001526 4.9e-16 89.4 199 37.7
FAN27G0184 Fragaria x ananassa HOM05D000174 ORTHO05D001526 8.4e-16 88.6 212 34.4
BcaB03g16465 Brassica carinata HOM05D000174 ORTHO05D001526 1.4e-15 87.8 228 35.1
Ah.01g023730 Amaranthus hybridus HOM05D000174 ORTHO05D001526 3.2e-15 86.7 193 35.2
Lsat_1_v5_gn_8_121041 Lactuca sativa HOM05D000174 ORTHO05D001526 3.2e-15 86.7 241 32.8
Gohir.A03G209700 Gossypium hirsutum HOM05D000174 ORTHO05D001526 7.1e-15 85.5 192 38.0
MBI08_g12710_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D001526 7.1e-15 85.5 271 31.4
BcaC06g36226 Brassica carinata HOM05D000174 ORTHO05D001526 9.3e-15 85.1 227 36.6
BolC7t41045H Brassica oleracea HOM05D000174 ORTHO05D001526 9.3e-15 85.1 227 36.6
Lsat_1_v5_gn_3_48800 Lactuca sativa HOM05D000174 ORTHO05D001526 1.2e-14 84.7 219 33.8
Aqoxy6G01686 Aquilegia oxysepala HOM05D000174 ORTHO05D001526 1.6e-14 84.3 284 29.6
CiPaw.05G091800 Carya illinoinensis HOM05D000174 ORTHO05D001526 2.1e-14 84.0 240 32.5
AUR62033207 Chenopodium quinoa HOM05D000174 ORTHO05D001526 3.5e-14 83.2 292 29.8
AUR62033209 Chenopodium quinoa HOM05D000174 ORTHO05D001526 3.5e-14 83.2 292 29.8
Lalb_Chr22g0352391 Lupinus albus HOM05D000174 ORTHO05D001526 6.0e-14 82.4 246 34.6
Lalb_Chr22g0352401 Lupinus albus HOM05D000174 ORTHO05D001526 6.0e-14 82.4 246 34.6
HanXRQChr17g0543991 Helianthus annuus HOM05D000174 ORTHO05D001526 7.9e-14 82.0 238 31.5
Zm00001eb199290 Zea mays HOM05D000174 ORTHO05D001526 1.0e-13 81.6 206 33.0
GSVIVG01023887001 Vitis vinifera HOM05D000174 ORTHO05D001526 2.3e-13 80.5 284 29.2
ClCG02G003500 Citrullus lanatus HOM05D000174 ORTHO05D001526 3.9e-13 79.7 246 34.1
Sp3g30500 Schrenkiella parvula HOM05D000174 ORTHO05D001526 1.1e-12 78.2 239 33.9
Medtr5g062300 Medicago truncatula HOM05D000174 ORTHO05D001526 1.5e-12 77.8 243 30.9
Phvul.011G008400 Phaseolus vulgaris HOM05D000174 ORTHO05D001526 5.6e-12 75.9 250 30.8
Zm00001eb033660 Zea mays HOM05D000174 ORTHO05D001526 9.6e-12 75.1 223 30.9
MELO3C013258.2 Cucumis melo HOM05D000174 ORTHO05D001526 1.3e-11 74.7 114 42.1
EL10Ac9g21244 Beta vulgaris HOM05D000174 ORTHO05D001526 2.8e-11 73.6 195 32.3
DCAR_015662 Daucus carota HOM05D000174 ORTHO05D001526 2.8e-11 73.6 246 29.3
PGR042G3277 Punica granatum HOM05D000174 ORTHO05D001526 2.8e-11 73.6 183 35.5
Sed0005621 Sechium edule HOM05D000174 ORTHO05D001526 4.8e-11 72.8 189 33.3
SalBow5G3920 Salvia bowleyana HOM05D000174 ORTHO05D001526 6.2e-11 72.4 144 39.6
SalBow5G5261 Salvia bowleyana HOM05D000174 ORTHO05D001526 6.2e-11 72.4 144 39.6
Atru.chr5.3548 Acer truncatum HOM05D000174 ORTHO05D001526 8.1e-11 72.0 275 28.7
PSO210G1674 Papaver somniferum HOM05D000174 ORTHO05D001526 8.1e-11 72.0 244 31.1
Sed0014639 Sechium edule HOM05D000174 ORTHO05D001526 1.8e-10 70.9 143 38.5
PSO761G0216 Papaver somniferum HOM05D000174 ORTHO05D001526 2.4e-10 70.5 227 30.0
CsaV3_7G001810 Cucumis sativus L. HOM05D000174 ORTHO05D001526 4.0e-10 69.7 174 33.3
Nitab4.5_0000633g0100 Nicotiana tabacum HOM05D000174 ORTHO05D001526 9.0e-10 68.6 188 34.0
Sed0016743 Sechium edule HOM05D000174 ORTHO05D001526 1.2e-09 68.2 132 37.1
Solyc06g060480.1 Solanum lycopersicum HOM05D000174 ORTHO05D001526 1.2e-09 68.2 139 38.8
Medtr5g099040 Medicago truncatula HOM05D000174 ORTHO05D001526 2.0e-09 67.4 212 29.2
PGSC0003DMG400038709 Solanum tuberosum HOM05D000174 ORTHO05D001526 2.0e-09 67.4 132 38.6
BcaNung06636 Brassica carinata HOM05D000174 ORTHO05D001526 3.4e-09 66.6 181 35.4
HPP92_020708 Vanilla planifolia HOM05D000174 ORTHO05D001526 3.4e-09 66.6 72 48.6
BcaC01g00827 Brassica carinata HOM05D000174 ORTHO05D001526 5.8e-09 65.9 181 33.7
Sopen06g020600 Solanum pennellii HOM05D000174 ORTHO05D001526 5.8e-09 65.9 161 36.6
ATR0661G271 Amborella trichopoda HOM05D000174 ORTHO05D001526 9.9e-09 65.1 279 26.5
Sabra15G0041100 Salix brachista HOM05D000174 ORTHO05D001526 2.2e-08 63.9 80 50.0
TAR381G0686 Trochodendron aralioides HOM05D000174 ORTHO05D001526 2.9e-08 63.5 179 31.3
HPP92_003504 Vanilla planifolia HOM05D000174 ORTHO05D001526 2.9e-08 63.5 101 42.6
TAR628G0397 Trochodendron aralioides HOM05D000174 ORTHO05D001526 3.8e-08 63.2 197 35.0
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 4.9e-08 62.8 219 26.9
unitig_52.g17363 Utricularia gibba HOM05D000174 ORTHO05D001526 4.9e-08 62.8 71 53.5
GSVIVG01037364001 Vitis vinifera HOM05D000174 ORTHO05D001526 4.9e-08 62.8 210 29.5
C03p84840 Brassica napus HOM05D000174 ORTHO05D001526 6.4e-08 62.4 176 33.0
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 8.4e-08 62.0 63 54.0
Peaxi162Scf00051g00034 Petunia axillaris HOM05D000174 ORTHO05D001526 8.4e-08 62.0 195 32.3
HPP92_014994 Vanilla planifolia HOM05D000174 ORTHO05D001526 8.4e-08 62.0 71 45.1
A07p03950 Brassica napus HOM05D000174 ORTHO05D001526 1.1e-07 61.6 210 34.3
BraA07t28187Z Brassica rapa HOM05D000174 ORTHO05D001526 1.1e-07 61.6 210 34.3
CAN.G62.50 Capsicum annuum HOM05D000174 ORTHO05D001526 1.1e-07 61.6 77 48.1
Psat2g001240 Pisum sativum HOM05D000174 ORTHO05D001526 1.9e-07 60.8 74 45.9
AagrBONN_evm.TU.Sc2ySwM_228.1248 Anthoceros agrestis HOM05D000174 ORTHO05D001526 3.2e-07 60.1 35 65.7
C07p06290 Brassica napus HOM05D000174 ORTHO05D001526 3.2e-07 60.1 210 33.8
CsaV3_6G010150 Cucumis sativus L. HOM05D000174 ORTHO05D000198 4.2e-07 59.7 71 47.9
Phvul.008G291700 Phaseolus vulgaris HOM05D000174 ORTHO05D001526 5.5e-07 59.3 62 46.8
Pp3c22_2200 Physcomitrium patens HOM05D000174 ORTHO05D001526 5.5e-07 59.3 35 71.4
LjContig00222g0006901 Lotus japonicus HOM05D000174 ORTHO05D001526 7.1e-07 58.9 43 62.8
Pp3c19_21390 Physcomitrium patens HOM05D000174 ORTHO05D001526 7.1e-07 58.9 35 71.4
Psat2g023640 Pisum sativum HOM05D000174 ORTHO05D001526 7.1e-07 58.9 38 63.2
SEGI_02862 Sequoiadendron giganteum HOM05D000174 ORTHO05D001526 7.1e-07 58.9 88 44.3
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 7.1e-07 58.9 234 26.5
Cc01_g06930 Coffea canephora HOM05D000174 ORTHO05D000630 9.3e-07 58.5 84 45.2
Lj1g0000805 Lotus japonicus HOM05D000174 ORTHO05D001526 9.3e-07 58.5 242 26.0
Pp3c21_440 Physcomitrium patens HOM05D000174 ORTHO05D001526 9.3e-07 58.5 36 69.4
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 1.2e-06 58.2 87 35.6
ATR0069G047 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.1e-06 57.4 45 53.3
ATR1101G089 Amborella trichopoda HOM05D010587 ORTHO05D000630 2.1e-06 57.4 197 27.9
BolC3t20775H Brassica oleracea HOM05D000174 ORTHO05D001526 2.1e-06 57.4 174 32.2
BolC3t20778H Brassica oleracea HOM05D000174 ORTHO05D001526 2.1e-06 57.4 174 32.2
Pp3c18_22010 Physcomitrium patens HOM05D000174 ORTHO05D001526 2.1e-06 57.4 35 68.6
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 2.1e-06 57.4 249 27.3
Os02g0293900 Oryza sativa ssp. japonica HOM05D000174 ORTHO05D001526 2.7e-06 57.0 74 43.2
ClCG02G009940 Citrullus lanatus HOM05D000174 ORTHO05D001526 3.5e-06 56.6 101 36.6
SEGI_09770 Sequoiadendron giganteum HOM05D000174 ORTHO05D037574 4.6e-06 56.2 35 65.7
SEGI_36820 Sequoiadendron giganteum HOM05D000174 ORTHO05D037574 4.6e-06 56.2 35 65.7
DCAR_013757 Daucus carota HOM05D000174 ORTHO05D000630 6.0e-06 55.8 38 55.3
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 6.0e-06 55.8 63 46.0
Oeu025932.1 Olea europaea HOM05D011325 ORTHO05D000630 6.0e-06 55.8 88 33.0
unitig_0.g1056 Utricularia gibba HOM05D000174 ORTHO05D001526 6.0e-06 55.8 208 29.3
unitig_26.g10291 Utricularia gibba HOM05D001658 ORTHO05D001406 7.9e-06 55.5 252 25.0


User provided reference genes

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