Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15555 Utricularia gibba HOM05D003841 ORTHO05D004602 4.1e-162 574.7 299 100.0
unitig_746.g26819 Utricularia gibba HOM05D003841 ORTHO05D004602 3.0e-88 329.3 267 69.7
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 2.3e-56 223.4 329 45.9
SGA_v2.0_scaffold9G05000 Striga asiatica HOM05D003841 ORTHO05D004602 8.0e-49 198.4 323 44.0
SalBow7G4379 Salvia bowleyana HOM05D003841 ORTHO05D004602 4.0e-48 196.1 313 41.5
MSTRG.14400 Avicennia marina HOM05D003841 ORTHO05D004602 3.7e-46 189.5 288 43.8
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 1.3e-43 181.0 331 41.1
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 6.6e-43 178.7 329 39.2
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 2.3e-40 170.2 329 40.1
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 1.3e-38 164.5 332 39.2
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 6.4e-38 162.2 314 40.8
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 4.1e-37 159.5 326 35.0
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 7.0e-37 158.7 321 38.6
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 1.6e-36 157.5 335 39.7
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 1.6e-36 157.5 332 38.9
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 4.6e-36 156.0 328 36.9
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 5.0e-35 152.5 327 39.4
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 1.1e-34 151.4 327 35.8
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 6.8e-32 142.1 327 36.1
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 1.5e-31 141.0 310 39.0
Sopen07g032000 Solanum pennellii HOM05D003841 ORTHO05D004602 4.4e-31 139.4 332 36.1
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 7.5e-31 138.7 326 36.5
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 9.8e-31 138.3 346 33.8
SGA_v2.0_scaffold70G23570 Striga asiatica HOM05D003841 ORTHO05D004602 1.7e-30 137.5 315 35.6
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 2.2e-30 137.1 338 35.8
Solyc07g063870.3 Solanum lycopersicum HOM05D003841 ORTHO05D004602 2.2e-30 137.1 332 36.4
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.7e-30 136.3 342 35.4
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 6.4e-30 135.6 323 35.6
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.1e-29 134.8 312 34.6
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 1.4e-29 134.4 313 35.8
Lsat_1_v5_gn_7_107821 Lactuca sativa HOM05D003841 ORTHO05D004602 1.4e-29 134.4 315 34.6
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 2.4e-29 133.7 312 34.6
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 2.7e-28 130.2 350 32.3
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 4.6e-28 129.4 322 34.5
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 6.0e-28 129.0 318 35.5
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 7.8e-28 128.6 331 33.2
CSS0046033 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 1.3e-27 127.9 288 35.8
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 1.3e-27 127.9 328 32.6
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 1.7e-27 127.5 331 33.2
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 1.5e-26 124.4 324 32.4
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 1.9e-26 124.0 322 35.1
GSVIVG01014549001 Vitis vinifera HOM05D003841 ORTHO05D004602 1.9e-26 124.0 225 38.2
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 3.3e-26 123.2 336 32.4
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 4.3e-26 122.9 330 33.0
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 7.3e-26 122.1 322 31.1
Thhalv10014255m.g Eutrema salsugineum HOM05D003841 ORTHO05D004602 7.3e-26 122.1 310 33.9
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.6e-25 120.9 340 33.8
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 2.8e-25 120.2 333 31.2
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 4.7e-25 119.4 332 30.7
Carub.0008s1482 Capsella rubella HOM05D003841 ORTHO05D004602 6.2e-25 119.0 313 32.3
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 6.2e-25 119.0 327 34.3
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.1e-24 118.2 322 34.2
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 1.8e-24 117.5 325 33.5
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 2.3e-24 117.1 298 34.6
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.3e-24 117.1 330 32.1
Hund23360 Selenicereus undatus HOM05D003841 ORTHO05D004602 2.3e-24 117.1 312 32.4
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.1e-24 116.7 314 34.4
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 3.1e-24 116.7 333 30.0
Sp6g16510 Schrenkiella parvula HOM05D003841 ORTHO05D004602 4.0e-24 116.3 315 33.3
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 5.2e-24 115.9 330 32.1
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 6.8e-24 115.5 313 31.6
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 6.8e-24 115.5 333 32.4
CARHR267820 Cardamine hirsuta HOM05D003841 ORTHO05D004602 1.5e-23 114.4 318 34.0
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 2.0e-23 114.0 318 31.1
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.0e-23 114.0 340 32.6
BcaB08g35813 Brassica carinata HOM05D003841 ORTHO05D004602 2.6e-23 113.6 307 32.9
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 2.6e-23 113.6 317 32.5
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.4e-23 113.2 317 33.4
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 4.4e-23 112.8 333 29.7
AL8G29910 Arabidopsis lyrata HOM05D003841 ORTHO05D004602 7.5e-23 112.1 316 32.3
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 7.5e-23 112.1 319 31.7
BraA10t43276Z Brassica rapa HOM05D003841 ORTHO05D004602 9.9e-23 111.7 306 33.3
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 9.9e-23 111.7 333 29.4
A02p10210 Brassica napus HOM05D003841 ORTHO05D004602 1.3e-22 111.3 306 31.7
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 1.3e-22 111.3 332 30.7
A10p11770 Brassica napus HOM05D003841 ORTHO05D004602 1.7e-22 110.9 306 33.7
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 2.2e-22 110.5 309 32.4
AT5G54540 Arabidopsis thaliana HOM05D003841 ORTHO05D004602 2.9e-22 110.2 314 33.1
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 2.9e-22 110.2 309 33.7
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 2.9e-22 110.2 323 30.0
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 4.9e-22 109.4 310 31.3
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 4.9e-22 109.4 334 29.6
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 6.4e-22 109.0 311 32.8
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 8.3e-22 108.6 311 31.5
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 8.3e-22 108.6 333 32.1
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 8.3e-22 108.6 325 31.7
C02p16910 Brassica napus HOM05D003841 ORTHO05D004602 1.9e-21 107.5 304 30.6
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 1.9e-21 107.5 318 31.8
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 3.2e-21 106.7 319 30.4
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 3.2e-21 106.7 332 31.0
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 4.1e-21 106.3 326 31.0
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 4.1e-21 106.3 317 32.2
BcaC04g20329 Brassica carinata HOM05D003841 ORTHO05D004602 5.4e-21 105.9 306 33.0
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 5.4e-21 105.9 325 30.2
PSO675G0068 Papaver somniferum HOM05D003841 ORTHO05D004602 7.1e-21 105.5 314 31.5
Actinidia10692 Actinidia chinensis HOM05D003841 ORTHO05D004602 9.2e-21 105.1 237 36.7
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.6e-20 104.4 332 31.3
Sed0013156 Sechium edule HOM05D003841 ORTHO05D004602 1.6e-20 104.4 330 30.6
C09p44880 Brassica napus HOM05D003841 ORTHO05D004602 2.1e-20 104.0 309 32.4
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 2.1e-20 104.0 331 29.9
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 2.1e-20 104.0 331 29.9
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 2.1e-20 104.0 333 32.4
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 4.6e-20 102.8 472 27.5
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 1.7e-19 100.9 334 29.0
MELO3C018156.2 Cucumis melo HOM05D003841 ORTHO05D004602 3.9e-19 99.8 327 31.2
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 5.1e-19 99.4 339 29.5
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 5.1e-19 99.4 318 31.1
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 1.1e-18 98.2 329 29.8
BraA02t06092Z Brassica rapa HOM05D003841 ORTHO05D004602 1.1e-18 98.2 306 30.4
CsaV3_3G022650 Cucumis sativus L. HOM05D003841 ORTHO05D004602 1.9e-18 97.4 328 29.6
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.9e-18 97.4 326 32.2
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 1.9e-18 97.4 338 30.5
BolC9t57359H Brassica oleracea HOM05D003841 ORTHO05D004602 2.5e-18 97.1 313 30.4
CAN.G1160.11 Capsicum annuum HOM05D003841 ORTHO05D004602 2.5e-18 97.1 211 36.0
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 2.5e-18 97.1 333 29.7
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 4.3e-18 96.3 324 28.7
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 9.5e-18 95.1 328 30.2
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 9.5e-18 95.1 321 29.0
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 1.2e-17 94.7 325 29.5
Lj3g0010292 Lotus japonicus HOM05D003841 ORTHO05D004602 3.6e-17 93.2 328 31.4
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 3.6e-17 93.2 313 29.4
TAR623G1765 Trochodendron aralioides HOM05D003841 ORTHO05D004602 3.6e-17 93.2 339 28.3
PSO541G5517 Papaver somniferum HOM05D003841 ORTHO05D004602 4.7e-17 92.8 225 32.9
ATR0804G047 Amborella trichopoda HOM05D003841 ORTHO05D004602 6.2e-17 92.4 328 28.7
Aqoxy1G03844 Aquilegia oxysepala HOM05D003841 ORTHO05D004602 6.2e-17 92.4 329 29.5
Hund02157 Selenicereus undatus HOM05D003841 ORTHO05D004602 6.2e-17 92.4 313 29.7
Zm00001eb171810 Zea mays HOM05D003841 ORTHO05D004602 6.2e-17 92.4 328 31.1
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 1.1e-16 91.7 226 33.2
Oeu052334.1 Olea europaea HOM05D003841 ORTHO05D004602 1.8e-16 90.9 230 34.8
CDE05G3612 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 2.4e-16 90.5 249 28.9
Os08g0179900 Oryza sativa ssp. japonica HOM05D003841 ORTHO05D004602 5.2e-16 89.4 238 31.9
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 1.5e-15 87.8 326 28.8
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 3.4e-15 86.7 328 28.7
CDE05G3666 Ceratophyllum demersum HOM05D003841 ORTHO05D004602 1.7e-14 84.3 320 27.5
MBI18_g38396_MAGBIO Magnolia biondii HOM05D003841 ORTHO05D004602 2.2e-14 84.0 321 27.7
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 6.4e-14 82.4 325 28.9
Sabra11G0117400 Salix brachista HOM05D003841 ORTHO05D004602 8.4e-14 82.0 272 30.1
CAN.G64.40 Capsicum annuum HOM05D003841 ORTHO05D004602 1.4e-13 81.3 125 41.6
Gohir.D11G294233 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.9e-13 80.9 361 25.8
HPP92_005894 Vanilla planifolia HOM05D003841 ORTHO05D004602 3.2e-13 80.1 318 27.4
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 9.2e-13 78.6 332 28.9
BcaB05g22143 Brassica carinata HOM05D003841 ORTHO05D004602 2.1e-12 77.4 218 30.7
Gorai.007G317300 Gossypium raimondii HOM05D003841 ORTHO05D004602 2.1e-12 77.4 363 24.5
Oeu052338.1 Olea europaea HOM05D003841 ORTHO05D004602 2.7e-12 77.0 305 30.2
Ah.04g165190 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.3e-11 74.7 89 44.9
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 1.7e-11 74.3 345 28.7
Lsat_1_v5_gn_2_59361 Lactuca sativa HOM05D003841 ORTHO05D004602 1.5e-10 71.2 162 34.0
Sed0016497 Sechium edule HOM05D003841 ORTHO05D004602 2.1e-09 67.4 107 38.3
Gohir.A11G281650 Gossypium hirsutum HOM05D003841 ORTHO05D004602 3.6e-09 66.6 246 26.8
Oeu052339.1 Olea europaea HOM05D003841 ORTHO05D004602 1.4e-08 64.7 164 29.3
Sed0013484 Sechium edule HOM05D003841 ORTHO05D004602 2.4e-08 63.9 255 24.7
Cpa.g.sc80.126 Carica papaya HOM05D003841 ORTHO05D004602 1.5e-07 61.2 183 30.1
Cfa021072 Carpinus fangiana HOM05D003841 ORTHO05D004602 1.5e-07 61.2 114 39.5
SMO367G1113 Selaginella moellendorffii HOM05D002766 ORTHO05D002809 4.4e-07 59.7 328 28.4
PSO339G6399 Papaver somniferum HOM05D003841 ORTHO05D004602 1.3e-06 58.2 293 24.2
PSO384G0968 Papaver somniferum HOM05D003841 ORTHO05D004602 1.3e-06 58.2 291 23.7
MELO3C016604.2 Cucumis melo HOM05D003841 ORTHO05D004602 2.9e-06 57.0 267 23.6
PGR031G0981 Punica granatum HOM05D003841 ORTHO05D004602 4.9e-06 56.2 159 30.2


User provided reference genes

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