Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15549 Utricularia gibba HOM05D000531 ORTHO05D003264 3.0e-52 208.4 116 100.0
unitig_21.g20150 Utricularia gibba HOM05D004720 ORTHO05D005359 1.4e-09 66.6 67 62.7
ATR0180G005 Amborella trichopoda HOM05D000531 ORTHO05D003264 1.3e-07 60.1 73 50.7
Lsat_1_v5_gn_8_85300 Lactuca sativa HOM05D000531 ORTHO05D001630 1.3e-07 60.1 91 42.9
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 2.3e-07 59.3 78 50.0
Mapoly0069s0009 Marchantia polymorpha HOM05D000531 ORTHO05D000877 2.3e-07 59.3 65 50.8
MD07G1052500 Malus domestica HOM05D000531 ORTHO05D001630 2.9e-07 58.9 96 42.7
CAN.G959.45 Capsicum annuum HOM05D000531 ORTHO05D001630 3.8e-07 58.5 98 41.8
arahy.Tifrunner.gnm1.ann1.203Q7N Arachis hypogaea HOM05D000531 ORTHO05D001630 5.0e-07 58.2 91 44.0
MSTRG.22349 Avicennia marina HOM05D003331 ORTHO05D003264 5.0e-07 58.2 61 59.0
CAN.G128.130 Capsicum annuum HOM05D000531 ORTHO05D001630 5.0e-07 58.2 96 42.7
Nn2g14613 Nelumbo nucifera HOM05D000531 ORTHO05D001630 5.0e-07 58.2 91 42.9
Nitab4.5_0000811g0030 Nicotiana tabacum HOM05D000531 ORTHO05D001630 5.0e-07 58.2 96 42.7
Phvul.011G186800 Phaseolus vulgaris HOM05D000531 ORTHO05D001630 5.0e-07 58.2 96 41.7
PGSC0003DMG400028121 Solanum tuberosum HOM05D000531 ORTHO05D001630 5.0e-07 58.2 96 42.7
MSTRG.26201 Avicennia marina HOM05D000531 ORTHO05D001630 6.6e-07 57.8 98 42.9
Cpa.g.sc33.182 Carica papaya HOM05D000531 ORTHO05D001630 6.6e-07 57.8 91 42.9
Lalb_Chr19g0132611 Lupinus albus HOM05D000531 ORTHO05D001630 6.6e-07 57.8 96 41.7
Solyc10g081350.2 Solanum lycopersicum HOM05D000531 ORTHO05D001630 6.6e-07 57.8 96 42.7
Sopen10g031850 Solanum pennellii HOM05D000531 ORTHO05D001630 6.6e-07 57.8 96 42.7
VMungo1127G0147 Vigna mungo HOM05D000531 ORTHO05D001630 6.6e-07 57.8 96 41.7
Actinidia37870 Actinidia chinensis HOM05D000531 ORTHO05D001630 8.6e-07 57.4 89 42.7
MSTRG.24234 Avicennia marina HOM05D003331 ORTHO05D003264 8.6e-07 57.4 76 52.6
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 8.6e-07 57.4 66 53.0
CiPaw.13G048600 Carya illinoinensis HOM05D000531 ORTHO05D001630 8.6e-07 57.4 96 40.6
Ca_14175_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 8.6e-07 57.4 59 54.2
Medtr3g010660 Medicago truncatula HOM05D000531 ORTHO05D001630 8.6e-07 57.4 59 54.2
Peaxi162Scf00003g05367 Petunia axillaris HOM05D000531 ORTHO05D001630 8.6e-07 57.4 96 42.7
TPR.G5132 Trifolium pratense HOM05D000531 ORTHO05D001630 8.6e-07 57.4 59 55.9
TAR633G1290 Trochodendron aralioides HOM05D000531 ORTHO05D001630 8.6e-07 57.4 91 42.9
arahy.Tifrunner.gnm1.ann1.ZS1FXZ Arachis hypogaea HOM05D000531 ORTHO05D001630 1.1e-06 57.0 91 42.9
CANSAT21G2102 Cannabis sativa HOM05D000531 ORTHO05D001630 1.1e-06 57.0 96 40.6
ECA236G1381 Erigeron canadensis HOM05D000531 ORTHO05D001630 1.1e-06 57.0 88 42.0
Gohir.A05G285300 Gossypium hirsutum HOM05D000531 ORTHO05D001630 1.1e-06 57.0 91 41.8
Gorai.009G301400 Gossypium raimondii HOM05D000531 ORTHO05D001630 1.1e-06 57.0 91 41.8
Lj3g0019182 Lotus japonicus HOM05D000531 ORTHO05D001630 1.1e-06 57.0 57 54.4
PSO339G0899 Papaver somniferum HOM05D000531 ORTHO05D001630 1.1e-06 57.0 99 40.4
Phvul.009G018700 Phaseolus vulgaris HOM05D003331 ORTHO05D003264 1.1e-06 57.0 56 57.1
Prupe.2G056800 Prunus persica HOM05D000531 ORTHO05D001630 1.1e-06 57.0 96 41.7
Rhsim06G0050700 Rhododendron simsii HOM05D000531 ORTHO05D000877 1.1e-06 57.0 70 54.3
RcHm_v2.0_Chr1g0330441 Rosa chinensis HOM05D000531 ORTHO05D001630 1.1e-06 57.0 96 41.7
SalBow1G2623 Salvia bowleyana HOM05D001389 ORTHO05D004821 1.1e-06 57.0 96 41.7
Sc09g0004990 Simmondsia chinensis HOM05D000531 ORTHO05D001630 1.1e-06 57.0 97 40.2
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 1.1e-06 57.0 54 59.3
TPR.G25014 Trifolium pratense HOM05D000531 ORTHO05D001630 1.1e-06 57.0 59 54.2
Actinidia17971 Actinidia chinensis HOM05D000531 ORTHO05D009735 1.5e-06 56.6 89 41.6
Dinv37063 Davidia involucrata HOM05D000531 ORTHO05D001630 1.5e-06 56.6 91 41.8
HanXRQChr04g0125451 Helianthus annuus HOM05D000531 ORTHO05D001630 1.5e-06 56.6 96 40.6
Lalb_Chr03g0032521 Lupinus albus HOM05D000531 ORTHO05D001630 1.5e-06 56.6 96 41.7
PSO384G4223 Papaver somniferum HOM05D000531 ORTHO05D001630 1.5e-06 56.6 99 40.4
Psat4g141680 Pisum sativum HOM05D000531 ORTHO05D001630 1.5e-06 56.6 59 52.5
PGSC0003DMG400007208 Solanum tuberosum HOM05D000531 ORTHO05D001630 1.5e-06 56.6 96 40.6
GSVIVG01001940001 Vitis vinifera HOM05D000531 ORTHO05D001630 1.5e-06 56.6 91 41.8
BcaC07g40114 Brassica carinata HOM05D000531 ORTHO05D001630 1.9e-06 56.2 91 44.0
AUR62018468 Chenopodium quinoa HOM05D000531 ORTHO05D001630 1.9e-06 56.2 91 41.8
AUR62020955 Chenopodium quinoa HOM05D000531 ORTHO05D001630 1.9e-06 56.2 91 41.8
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.9e-06 56.2 58 60.3
MBI02_g13005_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 1.9e-06 56.2 113 40.7
Nn7g37256 Nelumbo nucifera HOM05D000531 ORTHO05D001630 1.9e-06 56.2 52 57.7
Nitab4.5_0002131g0060 Nicotiana tabacum HOM05D000531 ORTHO05D001630 1.9e-06 56.2 96 40.6
PGR031G1921 Punica granatum HOM05D003331 ORTHO05D003264 1.9e-06 56.2 57 54.4
VMungo1383G2950 Vigna mungo HOM05D000531 ORTHO05D001630 1.9e-06 56.2 91 44.0
arahy.Tifrunner.gnm1.ann1.N4NI2R Arachis hypogaea HOM05D000531 ORTHO05D001630 2.5e-06 55.8 59 52.5
BcaC07g39995 Brassica carinata HOM05D000531 ORTHO05D001630 2.5e-06 55.8 52 59.6
ClCG08G008570 Citrullus lanatus HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 39.6
CsaV3_6G004560 Cucumis sativus L. HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 39.6
Migut.J01594 Erythranthe guttata HOM05D000531 ORTHO05D001630 2.5e-06 55.8 94 41.5
Eucgr.K01706 Eucalyptus grandis HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 41.7
FvH4_7g04850 Fragaria vesca HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 41.7
Glyma.04G124200 Glycine max HOM05D000531 ORTHO05D001630 2.5e-06 55.8 57 52.6
Lj1g0026220 Lotus japonicus HOM05D000531 ORTHO05D001630 2.5e-06 55.8 91 42.9
Lj3g0022692 Lotus japonicus HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 40.6
Lalb_Chr02g0157611 Lupinus albus HOM05D000531 ORTHO05D001630 2.5e-06 55.8 52 59.6
Lalb_Chr22g0358261 Lupinus albus HOM05D000531 ORTHO05D001630 2.5e-06 55.8 91 42.9
MD02G1266800 Malus domestica HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 41.7
Manes.18G048100 Manihot esculenta HOM05D000531 ORTHO05D001630 2.5e-06 55.8 59 50.8
Nitab4.5_0000123g0060 Nicotiana tabacum HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 41.7
Sabra10G0193700 Salix brachista HOM05D000531 ORTHO05D001630 2.5e-06 55.8 59 50.8
SalBow6G2215 Salvia bowleyana HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 40.6
SalBow6G4932 Salvia bowleyana HOM05D000531 ORTHO05D001630 2.5e-06 55.8 96 40.6
Hund19046 Selenicereus undatus HOM05D000531 ORTHO05D001630 2.5e-06 55.8 91 41.8
HPP92_022194 Vanilla planifolia HOM05D003331 ORTHO05D003264 2.5e-06 55.8 42 73.8
AT3G56850 Arabidopsis thaliana HOM05D000531 ORTHO05D001630 3.3e-06 55.5 91 42.9
BcaC02g09874 Brassica carinata HOM05D000531 ORTHO05D001630 3.3e-06 55.5 91 42.9
Dinv14548 Davidia involucrata HOM05D000531 ORTHO05D001630 3.3e-06 55.5 91 41.8
Glyma.15G222400 Glycine max HOM05D000531 ORTHO05D001630 3.3e-06 55.5 91 42.9
Gohir.A05G285200 Gossypium hirsutum HOM05D000531 ORTHO05D001630 3.3e-06 55.5 91 41.8
MBI19_g34003_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D001630 3.3e-06 55.5 49 61.2
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 3.3e-06 55.5 52 59.6
Medtr8g043960 Medicago truncatula HOM05D000531 ORTHO05D001630 3.3e-06 55.5 59 52.5
SalBow7G2129 Salvia bowleyana HOM05D000531 ORTHO05D000877 3.3e-06 55.5 53 64.2
Sc02g0008740 Simmondsia chinensis HOM05D003331 ORTHO05D003264 3.3e-06 55.5 53 58.5
SGA_v2.0_scaffold69G23208 Striga asiatica HOM05D002397 ORTHO05D002667 3.3e-06 55.5 84 45.2
THA.LOC104821606 Tarenaya hassleriana HOM05D000531 ORTHO05D001630 3.3e-06 55.5 96 40.6
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 3.3e-06 55.5 52 59.6
TPR.G23695 Trifolium pratense HOM05D000531 ORTHO05D001630 3.3e-06 55.5 91 44.0
TWI63G0520 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 3.3e-06 55.5 96 42.7
HPP92_022184 Vanilla planifolia HOM05D003331 ORTHO05D003264 3.3e-06 55.5 42 73.8
BcaC08g44808 Brassica carinata HOM05D000531 ORTHO05D001630 4.2e-06 55.1 91 42.9
Glyma.03G003400 Glycine max HOM05D000531 ORTHO05D001630 4.2e-06 55.1 91 42.9
MBI03_g13475_MAGBIO Magnolia biondii HOM05D000531 ORTHO05D000877 4.2e-06 55.1 49 61.2
Os05g0489700 Oryza sativa ssp. japonica HOM05D000531 ORTHO05D001630 4.2e-06 55.1 47 63.8
PSO210G6648 Papaver somniferum HOM05D000531 ORTHO05D000877 4.2e-06 55.1 91 44.0
Psat5g225680 Pisum sativum HOM05D000531 ORTHO05D001630 4.2e-06 55.1 59 52.5
Potri.010G248100 Populus trichocarpa HOM05D000531 ORTHO05D001630 4.2e-06 55.1 91 41.8
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 4.2e-06 55.1 42 73.8
EL10Ac3g07386 Beta vulgaris HOM05D000531 ORTHO05D001630 5.5e-06 54.7 91 40.7
CDE02G0621 Ceratophyllum demersum HOM05D000531 ORTHO05D001630 5.5e-06 54.7 54 57.4
Ca_08335_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 5.5e-06 54.7 91 44.0
Ca_24118_v3 Cicer arietinum L. HOM05D000531 ORTHO05D001630 5.5e-06 54.7 96 39.6
ClCG10G000520 Citrullus lanatus HOM05D003331 ORTHO05D003264 5.5e-06 54.7 56 55.4
MELO3C019925.2 Cucumis melo HOM05D000531 ORTHO05D001630 5.5e-06 54.7 56 53.6
Migut.K00199 Erythranthe guttata HOM05D000531 ORTHO05D001630 5.5e-06 54.7 91 41.8
HanXRQChr10g0291921 Helianthus annuus HOM05D000531 ORTHO05D001630 5.5e-06 54.7 91 40.7
Nitab4.5_0000613g0150 Nicotiana tabacum HOM05D000531 ORTHO05D001630 5.5e-06 54.7 98 41.8
Prupe.1G508200 Prunus persica HOM05D000531 ORTHO05D001630 5.5e-06 54.7 109 42.2
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 5.5e-06 54.7 48 64.6
TAR636G0139 Trochodendron aralioides HOM05D000531 ORTHO05D001630 5.5e-06 54.7 49 61.2
HPP92_000689 Vanilla planifolia HOM05D000531 ORTHO05D001630 5.5e-06 54.7 52 55.8
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 5.5e-06 54.7 60 55.0
Zm00001eb352240 Zea mays HOM05D000531 ORTHO05D001630 5.5e-06 54.7 52 57.7
ATR0307G047 Amborella trichopoda HOM05D000531 ORTHO05D001630 7.2e-06 54.3 49 61.2
Ciclev10001893m.g Citrus clementina HOM05D000531 ORTHO05D001630 7.2e-06 54.3 49 59.2
Cc10_g04070 Coffea canephora HOM05D000531 ORTHO05D000877 7.2e-06 54.3 53 62.3
COL.COLO4_07159 Corchorus olitorius HOM05D000531 ORTHO05D001630 7.2e-06 54.3 54 53.7
Lj4C59T7 Lonicera japonica HOM05D000531 ORTHO05D000877 7.2e-06 54.3 53 62.3
Lalb_Chr01g0007601 Lupinus albus HOM05D000531 ORTHO05D001630 7.2e-06 54.3 96 40.6
Oeu049987.2 Olea europaea HOM05D000531 ORTHO05D000877 7.2e-06 54.3 51 58.8
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 7.2e-06 54.3 64 51.6
PGR031G0234 Punica granatum HOM05D000531 ORTHO05D000877 7.2e-06 54.3 53 62.3
Sabra14G0019300 Salix brachista HOM05D000531 ORTHO05D000877 7.2e-06 54.3 53 62.3
Sed0022838 Sechium edule HOM05D000531 ORTHO05D001630 7.2e-06 54.3 93 40.9
Solyc04g078840.3 Solanum lycopersicum HOM05D000531 ORTHO05D000877 7.2e-06 54.3 55 56.4
Sopen04g032440 Solanum pennellii HOM05D000531 ORTHO05D000877 7.2e-06 54.3 55 56.4
unitig_46.g18482 Utricularia gibba HOM05D000531 ORTHO05D001630 7.2e-06 54.3 96 42.7
Aa31LG10G11700 Aethionema arabicum HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 41.8
Carub.0005s2358 Capsella rubella HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 41.8
CARHR167000 Cardamine hirsuta HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 41.8
CiPaw.14G038300 Carya illinoinensis HOM05D000531 ORTHO05D001630 9.5e-06 53.9 54 53.7
Ca_15945_v3 Cicer arietinum L. HOM05D000531 ORTHO05D000877 9.5e-06 53.9 53 62.3
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 9.5e-06 53.9 42 71.4
Thhalv10006121m.g Eutrema salsugineum HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 41.8
Glyma.19G122800 Glycine max HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 42.9
Hma1.2p1_0315F.1_g122420 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 9.5e-06 53.9 70 52.9
Lalb_Chr14g0365181 Lupinus albus HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 41.8
Peaxi162Scf00575g00618 Petunia axillaris HOM05D000531 ORTHO05D001630 9.5e-06 53.9 54 55.6
Potri.008G010800 Populus trichocarpa HOM05D000531 ORTHO05D001630 9.5e-06 53.9 96 39.6
PGR142G1180 Punica granatum HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 42.9
QL04p051667 Quercus lobata HOM05D000531 ORTHO05D001630 9.5e-06 53.9 75 45.3
Sp5g05740 Schrenkiella parvula HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 41.8
Sed0014567 Sechium edule HOM05D000531 ORTHO05D001630 9.5e-06 53.9 54 53.7
TWI36G0579 Tripterygium wilfordii HOM05D000531 ORTHO05D001630 9.5e-06 53.9 91 45.1
TWI56G0987 Tripterygium wilfordii HOM05D000531 ORTHO05D000877 9.5e-06 53.9 49 59.2
HPP92_000657 Vanilla planifolia HOM05D000531 ORTHO05D001630 9.5e-06 53.9 52 55.8


User provided reference genes

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