Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 6.1e-72 274.2 158 100.0
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 7.3e-17 91.3 126 46.8
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.3e-15 86.3 125 44.0
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 4.4e-14 82.0 129 38.8
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 2.2e-13 79.7 131 37.4
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 2.2e-13 79.7 136 37.5
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 3.7e-13 79.0 131 43.5
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 4.9e-13 78.6 127 43.3
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 6.4e-13 78.2 128 39.8
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 6.4e-13 78.2 126 39.7
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 6.4e-13 78.2 124 41.9
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.1e-12 77.4 144 36.8
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.9e-12 76.6 131 37.4
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.9e-12 76.6 132 37.1
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 2.4e-12 76.3 121 36.4
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 2.4e-12 76.3 132 37.1
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 3.2e-12 75.9 123 39.8
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 4.1e-12 75.5 118 40.7
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 5.4e-12 75.1 127 38.6
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.4e-12 75.1 136 37.5
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 7.1e-12 74.7 144 32.6
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 7.1e-12 74.7 135 37.8
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 9.2e-12 74.3 137 35.0
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 9.2e-12 74.3 125 36.8
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.2e-11 73.9 135 37.8
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 1.6e-11 73.6 125 40.8
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 2.1e-11 73.2 145 32.4
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 2.7e-11 72.8 137 37.2
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.7e-11 72.8 118 38.1
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 4.6e-11 72.0 127 34.6
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 6.0e-11 71.6 120 38.3
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 6.0e-11 71.6 120 38.3
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 6.0e-11 71.6 128 36.7
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 1.0e-10 70.9 120 39.2
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 1.0e-10 70.9 130 36.9
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 1.0e-10 70.9 122 35.2
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 1.3e-10 70.5 121 37.2
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 1.3e-10 70.5 117 39.3
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 1.3e-10 70.5 121 38.8
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 1.3e-10 70.5 120 38.3
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.7e-10 70.1 122 38.5
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.3e-10 69.7 135 35.6
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 2.3e-10 69.7 129 34.9
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 2.3e-10 69.7 130 36.2
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 2.3e-10 69.7 129 35.7
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 3.9e-10 68.9 152 29.6
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 3.9e-10 68.9 120 37.5
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 5.1e-10 68.6 145 35.2
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 5.1e-10 68.6 128 35.9
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 5.1e-10 68.6 132 34.1
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 5.1e-10 68.6 127 35.4
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 5.1e-10 68.6 150 32.7
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 5.1e-10 68.6 127 33.1
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 6.6e-10 68.2 137 32.8
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 6.6e-10 68.2 127 37.0
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 1.1e-09 67.4 148 33.8
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.1e-09 67.4 140 35.0
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.5e-09 67.0 143 35.7
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.5e-09 67.0 131 34.4
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 1.9e-09 66.6 132 35.6
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.9e-09 66.6 126 36.5
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.9e-09 66.6 125 33.6
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 3.3e-09 65.9 125 32.0
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 4.3e-09 65.5 122 37.7
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 7.3e-09 64.7 117 35.0
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 7.3e-09 64.7 46 58.7
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 7.3e-09 64.7 46 58.7
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 9.5e-09 64.3 115 35.7
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 1.6e-08 63.5 139 30.2
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.6e-08 63.5 145 37.2
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.1e-08 63.2 152 33.6
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 3.6e-08 62.4 152 32.2
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 3.6e-08 62.4 145 28.3
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 1.1e-07 60.8 152 31.6
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.1e-07 60.8 117 32.5
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 1.1e-07 60.8 131 32.1
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 1.1e-07 60.8 151 29.1
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.1e-07 60.8 119 37.0
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 1.4e-07 60.5 145 34.5
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 1.4e-07 60.5 139 32.4
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.8e-07 60.1 119 34.5
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 1.8e-07 60.1 138 29.7
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 1.8e-07 60.1 138 29.7
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.8e-07 60.1 130 31.5
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 1.8e-07 60.1 128 31.2
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 2.3e-07 59.7 138 29.7
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 2.3e-07 59.7 153 29.4
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 3.1e-07 59.3 139 29.5
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 3.1e-07 59.3 139 29.5
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 4.0e-07 58.9 121 33.9
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 4.0e-07 58.9 139 30.2
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 4.0e-07 58.9 125 35.2
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 6.8e-07 58.2 140 32.9
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 6.8e-07 58.2 148 29.7
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 8.9e-07 57.8 137 32.1
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 8.9e-07 57.8 115 32.2
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 8.9e-07 57.8 145 33.8
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 1.2e-06 57.4 148 28.4
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 1.2e-06 57.4 130 30.0
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 1.2e-06 57.4 132 34.8
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 1.5e-06 57.0 120 33.3
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 2.0e-06 56.6 49 49.0
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 3.4e-06 55.8 116 31.9
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 5.8e-06 55.1 143 32.9
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 5.8e-06 55.1 120 36.7
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 7.6e-06 54.7 162 28.4


User provided reference genes

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