Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15465 Utricularia gibba HOM05D004690 ORTHO05D005527 1.3e-146 523.1 280 100.0
MSTRG.10705 Avicennia marina HOM05D004690 ORTHO05D005527 7.2e-92 341.3 262 70.2
Migut.K00308 Erythranthe guttata HOM05D004690 ORTHO05D005527 3.7e-88 328.9 268 68.3
SalBow1G0331 Salvia bowleyana HOM05D004690 ORTHO05D005527 1.1e-81 307.4 267 62.9
SGA_v2.0_scaffold63G21785 Striga asiatica HOM05D004690 ORTHO05D005527 1.8e-79 300.1 285 60.4
Sed0014938 Sechium edule HOM05D004690 ORTHO05D005527 4.5e-78 295.4 239 67.4
PGSC0003DMG400011147 Solanum tuberosum HOM05D004690 ORTHO05D005527 5.9e-78 295.0 273 63.4
COL.COLO4_23958 Corchorus olitorius HOM05D004690 ORTHO05D005527 1.3e-77 293.9 249 63.5
arahy.Tifrunner.gnm1.ann1.VFXC0H Arachis hypogaea HOM05D004690 ORTHO05D005527 1.7e-77 293.5 227 73.6
Thecc.09G151500 Theobroma cacao HOM05D004690 ORTHO05D005527 2.2e-77 293.1 274 60.6
arahy.Tifrunner.gnm1.ann1.RJ6BPE Arachis hypogaea HOM05D004690 ORTHO05D005527 5.0e-77 292.0 227 73.1
Dinv42835 Davidia involucrata HOM05D004690 ORTHO05D005527 6.5e-77 291.6 286 62.6
Dinv43264 Davidia involucrata HOM05D004690 ORTHO05D005527 6.5e-77 291.6 286 62.6
Phvul.003G154700 Phaseolus vulgaris HOM05D004690 ORTHO05D005527 8.5e-77 291.2 276 61.6
Solyc07g005830.3 Solanum lycopersicum HOM05D004690 ORTHO05D005527 1.1e-76 290.8 273 63.0
GSVIVG01023642001 Vitis vinifera HOM05D004690 ORTHO05D005527 3.2e-76 289.3 273 60.1
HanXRQChr10g0307591 Helianthus annuus HOM05D004690 ORTHO05D005527 7.2e-76 288.1 273 63.7
Manes.14G143400 Manihot esculenta HOM05D004690 ORTHO05D005527 1.2e-75 287.3 220 69.1
TAR383G0346 Trochodendron aralioides HOM05D004690 ORTHO05D005527 1.2e-75 287.3 283 61.5
Gohir.A07G037900 Gossypium hirsutum HOM05D004690 ORTHO05D005527 1.6e-75 287.0 271 59.4
Gorai.001G044800 Gossypium raimondii HOM05D004690 ORTHO05D005527 1.6e-75 287.0 271 59.4
Sopen07g001930 Solanum pennellii HOM05D004690 ORTHO05D005527 1.6e-75 287.0 273 62.6
Hma1.2p1_0028F.1_g017650 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 2.1e-75 286.6 284 55.6
Gohir.D07G042000 Gossypium hirsutum HOM05D004690 ORTHO05D005527 3.6e-75 285.8 271 59.0
Ciclev10009165m.g Citrus clementina HOM05D004690 ORTHO05D005527 4.7e-75 285.4 263 62.4
Sed0017216 Sechium edule HOM05D004690 ORTHO05D005527 4.7e-75 285.4 242 65.3
CiPaw.15G165900 Carya illinoinensis HOM05D004690 ORTHO05D005527 8.0e-75 284.6 256 64.1
CiPaw.16G107700 Carya illinoinensis HOM05D004690 ORTHO05D005527 1.8e-74 283.5 276 60.1
Potri.018G104000 Populus trichocarpa HOM05D004690 ORTHO05D005527 1.8e-74 283.5 221 68.8
Nn2g12436 Nelumbo nucifera HOM05D004690 ORTHO05D005527 2.3e-74 283.1 280 59.3
CSS0047585 Camellia sinensis var. sinensis HOM05D004690 ORTHO05D005527 3.0e-74 282.7 283 58.0
VMungo1215G2193 Vigna mungo HOM05D004690 ORTHO05D005527 1.1e-73 280.8 280 58.6
CsaV3_2G007620 Cucumis sativus L. HOM05D004690 ORTHO05D005527 2.0e-73 280.0 227 67.0
FvH4_1g00690 Fragaria vesca HOM05D004690 ORTHO05D005527 2.0e-73 280.0 277 56.7
CANSAT11G0185 Cannabis sativa HOM05D004690 ORTHO05D005527 7.4e-73 278.1 241 65.1
RcHm_v2.0_Chr2g0085411 Rosa chinensis HOM05D004690 ORTHO05D005527 7.4e-73 278.1 252 59.9
Cc06_g14700 Coffea canephora HOM05D004690 ORTHO05D005527 9.7e-73 277.7 270 61.1
Lj4g0007308 Lotus japonicus HOM05D004690 ORTHO05D005527 6.3e-72 275.0 238 63.4
ECA234G3490 Erigeron canadensis HOM05D004690 ORTHO05D005527 1.1e-71 274.2 266 59.4
Prupe.7G265300 Prunus persica HOM05D004690 ORTHO05D005527 1.1e-71 274.2 273 56.8
CSS0044573 Camellia sinensis var. sinensis HOM05D004690 ORTHO05D005527 1.8e-71 273.5 283 58.0
Lsat_1_v5_gn_8_63881 Lactuca sativa HOM05D004690 ORTHO05D005527 1.8e-71 273.5 266 60.9
TWI63G1092 Tripterygium wilfordii HOM05D004690 ORTHO05D005527 1.8e-71 273.5 225 68.9
Peaxi162Scf00401g00330 Petunia axillaris HOM05D004690 ORTHO05D005527 2.4e-71 273.1 193 76.7
Eucgr.C02505 Eucalyptus grandis HOM05D004690 ORTHO05D005527 3.1e-71 272.7 251 62.5
FAN26G1928 Fragaria x ananassa HOM05D004690 ORTHO05D005527 3.1e-71 272.7 278 57.2
HanXRQChr05g0138951 Helianthus annuus HOM05D004690 ORTHO05D005527 4.1e-71 272.3 259 61.0
Lsat_1_v5_gn_5_89380 Lactuca sativa HOM05D004690 ORTHO05D005527 4.1e-71 272.3 223 64.1
Lalb_Chr12g0198781 Lupinus albus HOM05D004690 ORTHO05D005527 5.3e-71 271.9 193 74.1
Cpa.g.sc46.177 Carica papaya HOM05D004690 ORTHO05D005527 9.1e-71 271.2 266 60.9
BcaNung02747 Brassica carinata HOM05D004690 ORTHO05D005527 3.5e-70 269.2 238 64.7
C07p58160 Brassica napus HOM05D004690 ORTHO05D005527 3.5e-70 269.2 238 64.7
BolC7t46275H Brassica oleracea HOM05D004690 ORTHO05D005527 3.5e-70 269.2 238 64.7
Atru.chr7.16 Acer truncatum HOM05D004690 ORTHO05D005527 5.9e-70 268.5 222 66.7
Cfa020803 Carpinus fangiana HOM05D004690 ORTHO05D005527 7.7e-70 268.1 222 67.1
Glyma.02G205700 Glycine max HOM05D004690 ORTHO05D005527 7.7e-70 268.1 226 67.7
Aqoxy7G03362 Aquilegia oxysepala HOM05D004690 ORTHO05D005527 1.3e-69 267.3 221 66.1
Glyma.17G072300 Glycine max HOM05D004690 ORTHO05D005527 2.9e-69 266.2 187 73.3
PGR102G1430 Punica granatum HOM05D004690 ORTHO05D005527 5.0e-69 265.4 225 67.6
Carub.0004s0323 Capsella rubella HOM05D004690 ORTHO05D005527 1.5e-68 263.8 237 63.7
ATR0019G027 Amborella trichopoda HOM05D004690 ORTHO05D005527 2.5e-68 263.1 212 68.4
AL4G14110 Arabidopsis lyrata HOM05D004690 ORTHO05D005527 2.5e-68 263.1 239 59.8
MD02G1005700 Malus domestica HOM05D004690 ORTHO05D005527 3.2e-68 262.7 246 60.6
Medtr4g130530 Medicago truncatula HOM05D004690 ORTHO05D005527 3.2e-68 262.7 268 56.0
CARHR238570 Cardamine hirsuta HOM05D004690 ORTHO05D005527 4.2e-68 262.3 228 65.4
A03p60250 Brassica napus HOM05D004690 ORTHO05D005527 5.5e-68 261.9 241 63.1
BraA03t15065Z Brassica rapa HOM05D004690 ORTHO05D005527 5.5e-68 261.9 241 63.1
AT2G24060 Arabidopsis thaliana HOM05D004690 ORTHO05D005527 7.2e-68 261.5 230 62.2
Sp7g28600 Schrenkiella parvula HOM05D004690 ORTHO05D005527 7.2e-68 261.5 259 59.1
DCAR_017916 Daucus carota HOM05D004690 ORTHO05D005527 1.6e-67 260.4 281 54.4
BcaB06g27964 Brassica carinata HOM05D004690 ORTHO05D005527 4.7e-67 258.8 221 66.1
MD15G1150400 Malus domestica HOM05D004690 ORTHO05D005527 4.7e-67 258.8 240 61.2
Psat7g006440 Pisum sativum HOM05D004690 ORTHO05D005527 4.7e-67 258.8 239 61.5
ECA236G1766 Erigeron canadensis HOM05D004690 ORTHO05D005527 1.8e-66 256.9 207 69.1
BraA04t17449Z Brassica rapa HOM05D004690 ORTHO05D005527 2.3e-66 256.5 252 61.5
AT4G30690 Arabidopsis thaliana HOM05D004690 ORTHO05D005527 4.0e-66 255.8 264 58.0
BcaC02g08501 Brassica carinata HOM05D004690 ORTHO05D005527 4.0e-66 255.8 220 67.3
CARHR118290 Cardamine hirsuta HOM05D004690 ORTHO05D005527 4.0e-66 255.8 200 66.5
Thhalv10000269m.g Eutrema salsugineum HOM05D004690 ORTHO05D005527 4.0e-66 255.8 221 65.2
Glyma.04G154000 Glycine max HOM05D004690 ORTHO05D005527 8.8e-66 254.6 191 69.1
Aa31LG7G12770 Aethionema arabicum HOM05D004690 ORTHO05D005527 1.5e-65 253.8 255 58.0
A04p18380 Brassica napus HOM05D004690 ORTHO05D005527 2.0e-65 253.4 241 63.9
Sp4g02970 Schrenkiella parvula HOM05D004690 ORTHO05D005527 4.4e-65 252.3 273 57.1
C04p53650 Brassica napus HOM05D004690 ORTHO05D005527 5.7e-65 251.9 233 64.8
BolC4t26921H Brassica oleracea HOM05D004690 ORTHO05D005527 9.8e-65 251.1 221 67.0
Thhalv10025935m.g Eutrema salsugineum HOM05D004690 ORTHO05D005527 9.8e-65 251.1 197 69.5
Hma1.2p1_0222F.1_g093770 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 2.2e-64 250.0 294 53.7
Potri.006G182000 Populus trichocarpa HOM05D004690 ORTHO05D005527 2.2e-64 250.0 219 64.8
PSO111G0014 Papaver somniferum HOM05D004690 ORTHO05D005527 3.7e-64 249.2 231 59.3
FAN28G2863 Fragaria x ananassa HOM05D004690 ORTHO05D005527 6.3e-64 248.4 194 68.0
PSO782G2525 Papaver somniferum HOM05D004690 ORTHO05D005527 8.3e-64 248.1 231 59.3
Nitab4.5_0002611g0030 Nicotiana tabacum HOM05D004690 ORTHO05D005527 1.1e-63 247.7 172 75.0
BcaNung04824 Brassica carinata HOM05D004690 ORTHO05D005527 1.4e-63 247.3 189 70.9
CAN.G160.27 Capsicum annuum HOM05D004690 ORTHO05D005527 3.1e-63 246.1 171 77.8
CDE02G3377 Ceratophyllum demersum HOM05D004690 ORTHO05D005527 3.1e-63 246.1 190 72.1
Rhsim01G0027300 Rhododendron simsii HOM05D004690 ORTHO05D005527 7.0e-63 245.0 287 51.6
AL7G21430 Arabidopsis lyrata HOM05D004690 ORTHO05D005527 9.1e-63 244.6 199 67.3
FAN23G2407 Fragaria x ananassa HOM05D004690 ORTHO05D005527 4.5e-62 242.3 280 51.8
FAN23G2925 Fragaria x ananassa HOM05D004690 ORTHO05D005527 4.5e-62 242.3 280 51.8
Ah.09g228780 Amaranthus hybridus HOM05D004690 ORTHO05D005527 1.7e-61 240.4 280 56.8
ClCG02G014380 Citrullus lanatus HOM05D004690 ORTHO05D005527 2.9e-61 239.6 257 54.9
vmacro16787 Vaccinium macrocarpon HOM05D004690 ORTHO05D005527 5.0e-61 238.8 317 48.6
Sc18g0003050 Simmondsia chinensis HOM05D004690 ORTHO05D005527 1.5e-60 237.3 228 62.3
THA.LOC104803547 Tarenaya hassleriana HOM05D004690 ORTHO05D005527 1.9e-60 236.9 223 60.1
Sabra18G0089400 Salix brachista HOM05D004690 ORTHO05D005527 9.4e-60 234.6 225 60.0
Haze_19160 Corylus avellana HOM05D004690 ORTHO05D005527 2.1e-59 233.4 261 54.8
Aa31LG2G19730 Aethionema arabicum HOM05D004690 ORTHO05D005527 3.6e-59 232.6 259 53.3
MBI15_g27186_MAGBIO Magnolia biondii HOM05D004690 ORTHO05D005527 8.0e-59 231.5 273 52.4
MELO3C004125.2 Cucumis melo HOM05D004690 ORTHO05D005527 1.0e-58 231.1 228 58.3
Oeu054265.1 Olea europaea HOM05D004690 ORTHO05D005527 1.4e-58 230.7 155 76.8
EL10Ac8g18927 Beta vulgaris HOM05D004690 ORTHO05D005527 2.3e-58 229.9 193 66.3
QL02p093831 Quercus lobata HOM05D004690 ORTHO05D005527 3.0e-58 229.6 231 59.7
Hund08935 Selenicereus undatus HOM05D004690 ORTHO05D005527 3.0e-58 229.6 246 56.1
Zm00001eb257720 Zea mays HOM05D004690 ORTHO05D005527 8.8e-58 228.0 198 61.1
Lj7C462G3 Lonicera japonica HOM05D000062 ORTHO05D000043 9.8e-57 224.6 214 60.3
HPP92_018341 Vanilla planifolia HOM05D004690 ORTHO05D005527 9.8e-57 224.6 197 60.9
Os02g0794400 Oryza sativa ssp. japonica HOM05D004690 ORTHO05D005527 3.5e-54 216.1 183 64.5
CDE05G2888 Ceratophyllum demersum HOM05D004690 ORTHO05D005527 1.1e-52 211.1 184 62.0
AUR62025348 Chenopodium quinoa HOM05D004690 ORTHO05D005527 7.5e-49 198.4 244 49.6
Mapoly0090s0068 Marchantia polymorpha HOM05D004690 ORTHO05D005527 1.7e-48 197.2 212 48.6
AUR62028351 Chenopodium quinoa HOM05D004690 ORTHO05D005527 4.9e-48 195.7 238 50.4
Nn8g39977 Nelumbo nucifera HOM05D004690 ORTHO05D005527 1.6e-46 190.7 137 71.5
Duzib150G0069 Durio zibethinus HOM05D004690 ORTHO05D005527 1.7e-45 187.2 270 46.3
Pp3c14_5800 Physcomitrium patens HOM05D004690 ORTHO05D005527 1.1e-44 184.5 234 47.9
Pp3c2_19940 Physcomitrium patens HOM05D004690 ORTHO05D005527 2.5e-44 183.3 232 46.6
CBR_g7972 Chara braunii HOM05D004690 ORTHO05D005527 4.7e-43 179.1 189 52.9
AagrBONN_evm.TU.Sc2ySwM_228.3886 Anthoceros agrestis HOM05D004690 ORTHO05D005527 3.1e-42 176.4 212 48.1
Aa31LG3G8690 Aethionema arabicum HOM05D004690 ORTHO05D005527 6.4e-40 168.7 120 70.0
SMO353G0310 Selaginella moellendorffii HOM05D004690 ORTHO05D005527 3.5e-38 162.9 187 48.1
MCO15G501 Micromonas commoda HOM05D004690 ORTHO05D005527 2.8e-35 153.3 189 45.5
Ca_21146_v3 Cicer arietinum L. HOM05D004690 ORTHO05D005527 2.0e-33 147.1 107 70.1
Manes.06G030800 Manihot esculenta HOM05D004690 ORTHO05D005527 5.8e-33 145.6 109 70.6
Actinidia24377 Actinidia chinensis HOM05D004690 ORTHO05D005527 1.7e-29 134.0 92 72.8
Actinidia38313 Actinidia chinensis HOM05D004690 ORTHO05D005527 6.6e-29 132.1 258 40.7
PRCOL_00002519 Prasinoderma coloniale HOM05D004690 ORTHO05D005527 6.6e-29 132.1 168 41.7
PGSC0003DMG400017027 Solanum tuberosum HOM05D004690 ORTHO05D005527 5.6e-28 129.0 70 90.0
SEGI_13735 Sequoiadendron giganteum HOM05D004690 ORTHO05D005527 3.4e-25 119.8 126 50.8
Lsat_1_v5_gn_2_57160 Lactuca sativa HOM05D003492 ORTHO05D022499 2.2e-24 117.1 96 59.4
Carub.0007s0984 Capsella rubella HOM05D004690 ORTHO05D005527 2.9e-24 116.7 152 50.7
Hma1.2p1_0028F.1_g017670 Hydrangea macrophylla HOM05D004690 ORTHO05D005527 1.1e-20 104.8 155 43.9
Cfa021053 Carpinus fangiana HOM05D004690 ORTHO05D005527 6.2e-19 99.0 173 33.5
HanXRQChr10g0314901 Helianthus annuus HOM05D000214 ORTHO05D000131 6.2e-19 99.0 80 65.0
Cre01.g001550 Chlamydomonas reinhardtii HOM05D004690 ORTHO05D005527 1.1e-18 98.2 149 36.9
Oeu054266.1 Olea europaea HOM05D004690 ORTHO05D005527 1.7e-16 90.9 117 46.2
Nn8g39976 Nelumbo nucifera HOM05D004690 ORTHO05D005527 2.1e-14 84.0 84 59.5
BcaB06g27963 Brassica carinata HOM05D004690 ORTHO05D005527 7.8e-14 82.0 66 63.6
SEGI_33455 Sequoiadendron giganteum HOM05D004690 ORTHO05D005527 4.3e-12 76.3 60 66.7
Dinv41359 Davidia involucrata HOM05D004690 ORTHO05D005527 1.3e-11 74.7 81 58.0
Aa31LG8G14120 Aethionema arabicum HOM05D005442 ORTHO05D006450 2.4e-10 70.5 178 28.1
Ca_21142_v3 Cicer arietinum L. HOM05D004690 ORTHO05D005527 1.2e-09 68.2 78 52.6
Carub.0001s3251 Capsella rubella HOM05D005442 ORTHO05D006450 9.9e-09 65.1 224 28.6
SMO171G0119 Selaginella moellendorffii HOM05D005442 ORTHO05D006450 2.2e-08 63.9 191 30.9
THA.LOC104807379 Tarenaya hassleriana HOM05D005442 ORTHO05D006450 2.2e-08 63.9 178 29.2
Mapoly0037s0141 Marchantia polymorpha HOM05D005442 ORTHO05D006450 2.9e-08 63.5 146 30.1
AagrBONN_evm.TU.Sc2ySwM_344.3952 Anthoceros agrestis HOM05D005442 ORTHO05D006450 4.9e-08 62.8 137 28.5
MBI11_g07617_MAGBIO Magnolia biondii HOM05D005442 ORTHO05D006450 6.4e-08 62.4 193 30.6
AL1G48920 Arabidopsis lyrata HOM05D005442 ORTHO05D006450 1.1e-07 61.6 256 27.3
ECA233G3196 Erigeron canadensis HOM05D005442 ORTHO05D006450 1.1e-07 61.6 128 33.6
AT1G34360 Arabidopsis thaliana HOM05D005442 ORTHO05D006450 1.9e-07 60.8 253 28.1
CARHR033820 Cardamine hirsuta HOM05D005442 ORTHO05D006450 2.4e-07 60.5 217 27.6
Thhalv10022629m.g Eutrema salsugineum HOM05D005442 ORTHO05D006450 2.4e-07 60.5 223 28.3
Sp3g30220 Schrenkiella parvula HOM05D005442 ORTHO05D006450 3.2e-07 60.1 229 27.9
A07p04140 Brassica napus HOM05D005442 ORTHO05D006450 4.2e-07 59.7 224 25.9
BraA07t28205Z Brassica rapa HOM05D005442 ORTHO05D006450 4.2e-07 59.7 224 25.9
CDE04G0468 Ceratophyllum demersum HOM05D005442 ORTHO05D000996 4.2e-07 59.7 206 28.2
Atru.chr5.3384 Acer truncatum HOM05D005442 ORTHO05D006450 5.4e-07 59.3 163 26.4
BcaB03g16428 Brassica carinata HOM05D005442 ORTHO05D006450 5.4e-07 59.3 195 27.7
BcaC06g36199 Brassica carinata HOM05D005442 ORTHO05D006450 5.4e-07 59.3 195 27.7
C07p06570 Brassica napus HOM05D005442 ORTHO05D006450 5.4e-07 59.3 195 27.7
BolC7t41079H Brassica oleracea HOM05D005442 ORTHO05D006450 5.4e-07 59.3 195 27.7
CBR_g29438 Chara braunii HOM05D005442 ORTHO05D006450 5.4e-07 59.3 157 27.4
MSTRG.16924 Avicennia marina HOM05D005442 ORTHO05D006450 7.1e-07 58.9 274 23.4
Medtr7g017820 Medicago truncatula HOM05D004690 ORTHO05D005527 1.2e-06 58.2 33 81.8
Sc08g0002780 Simmondsia chinensis HOM05D005442 ORTHO05D006450 1.2e-06 58.2 177 26.6
FAN23G1872 Fragaria x ananassa HOM05D004690 ORTHO05D005527 1.6e-06 57.8 132 33.3
PGSC0003DMG400006166 Solanum tuberosum HOM05D005442 ORTHO05D006450 2.1e-06 57.4 147 31.3
TWI31G1375 Tripterygium wilfordii HOM05D005442 ORTHO05D006450 2.1e-06 57.4 200 27.5
A02p43620 Brassica napus HOM05D004690 ORTHO05D005527 2.7e-06 57.0 39 64.1
A02p43630 Brassica napus HOM05D004690 ORTHO05D005527 2.7e-06 57.0 39 64.1
CDE02G3112 Ceratophyllum demersum HOM05D005442 ORTHO05D006450 2.7e-06 57.0 219 28.3
Dinv41924 Davidia involucrata HOM05D005442 ORTHO05D006450 2.7e-06 57.0 202 26.2
Pp3c27_2790 Physcomitrium patens HOM05D005442 ORTHO05D006450 6.0e-06 55.8 181 26.0
Sopen01g053760 Solanum pennellii HOM05D005442 ORTHO05D006450 6.0e-06 55.8 195 27.7
Migut.B00066 Erythranthe guttata HOM05D005442 ORTHO05D006450 7.9e-06 55.5 206 24.3
Solyc01g111720.4 Solanum lycopersicum HOM05D005442 ORTHO05D006450 7.9e-06 55.5 203 27.1
unitig_744.g24278 Utricularia gibba HOM05D005442 ORTHO05D006450 7.9e-06 55.5 147 29.9


User provided reference genes

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