Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15442 Utricularia gibba HOM05D004396 ORTHO05D005272 3.2e-57 224.9 118 100.0
Actinidia14779 Actinidia chinensis HOM05D004396 ORTHO05D005272 6.8e-52 207.2 118 91.5
Dinv25260 Davidia involucrata HOM05D004396 ORTHO05D005272 6.8e-52 207.2 118 90.7
Actinidia18135 Actinidia chinensis HOM05D004396 ORTHO05D005272 8.9e-52 206.8 118 91.5
Hma1.2p1_0870F.1_g230890 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 1.5e-51 206.1 118 91.5
CSS0013599 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 9.8e-51 203.4 118 91.5
CSS0046263 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 9.8e-51 203.4 118 91.5
Thecc.03G310300 Theobroma cacao HOM05D004396 ORTHO05D005272 9.8e-51 203.4 118 89.8
Oeu027093.1 Olea europaea HOM05D004396 ORTHO05D005272 2.2e-50 202.2 118 89.8
MSTRG.12178 Avicennia marina HOM05D004396 ORTHO05D005272 2.9e-50 201.8 119 90.8
CSS0033679 Camellia sinensis var. sinensis HOM05D004396 ORTHO05D005272 2.9e-50 201.8 118 89.8
Hma1.2p1_0890F.1_g233090 Hydrangea macrophylla HOM05D004396 ORTHO05D005272 3.7e-50 201.4 118 89.0
Rhsim11G0021700 Rhododendron simsii HOM05D004396 ORTHO05D005272 8.3e-50 200.3 118 89.0
Cc08_g03470 Coffea canephora HOM05D004396 ORTHO05D005272 1.1e-49 199.9 118 89.8
Peaxi162Scf00170g00812 Petunia axillaris HOM05D004396 ORTHO05D005272 1.1e-49 199.9 118 88.1
Solyc08g076460.3 Solanum lycopersicum HOM05D004396 ORTHO05D005272 1.1e-49 199.9 118 87.3
Sopen08g025040 Solanum pennellii HOM05D004396 ORTHO05D005272 1.1e-49 199.9 118 87.3
PGSC0003DMG400014795 Solanum tuberosum HOM05D004396 ORTHO05D005272 1.1e-49 199.9 118 87.3
CAN.G726.24 Capsicum annuum HOM05D004396 ORTHO05D005272 1.4e-49 199.5 118 87.3
Dinv29003 Davidia involucrata HOM05D004396 ORTHO05D005272 3.2e-49 198.4 118 89.0
ECA240G0094 Erigeron canadensis HOM05D004396 ORTHO05D005272 3.2e-49 198.4 119 89.9
SGA_v2.0_scaffold36G14295 Striga asiatica HOM05D004396 ORTHO05D005272 4.1e-49 198.0 121 87.6
DCAR_008222 Daucus carota HOM05D004396 ORTHO05D005272 7.0e-49 197.2 119 88.2
CDE08G0196 Ceratophyllum demersum HOM05D004396 ORTHO05D005272 9.2e-49 196.8 118 85.6
COL.COLO4_16940 Corchorus olitorius HOM05D004396 ORTHO05D005272 9.2e-49 196.8 118 86.4
vmacro00278 Vaccinium macrocarpon HOM05D004396 ORTHO05D005272 1.2e-48 196.4 118 87.3
Aqoxy7G03666 Aquilegia oxysepala HOM05D004396 ORTHO05D005272 1.6e-48 196.1 115 89.6
HanXRQChr13g0414241 Helianthus annuus HOM05D004396 ORTHO05D005272 1.6e-48 196.1 119 89.1
Nitab4.5_0000529g0110 Nicotiana tabacum HOM05D004396 ORTHO05D005272 1.6e-48 196.1 118 84.7
SGA_v2.0_scaffold198G41072 Striga asiatica HOM05D004396 ORTHO05D005272 2.0e-48 195.7 121 86.8
GSVIVG01013064001 Vitis vinifera HOM05D004396 ORTHO05D005272 2.0e-48 195.7 118 88.1
HanXRQChr06g0172781 Helianthus annuus HOM05D004396 ORTHO05D005272 2.7e-48 195.3 120 88.3
Gorai.003G185400 Gossypium raimondii HOM05D004396 ORTHO05D005272 3.5e-48 194.9 119 87.4
Duzib084G0048 Durio zibethinus HOM05D004396 ORTHO05D005272 4.6e-48 194.5 119 86.6
ECA240G0984 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.6e-48 194.5 119 88.2
Nitab4.5_0000556g0250 Nicotiana tabacum HOM05D004396 ORTHO05D005272 4.6e-48 194.5 118 83.9
Nitab4.5_0004528g0030 Nicotiana tabacum HOM05D004396 ORTHO05D005272 4.6e-48 194.5 118 83.9
Potri.001G136800 Populus trichocarpa HOM05D004396 ORTHO05D005272 4.6e-48 194.5 118 86.4
QL12p001650 Quercus lobata HOM05D004396 ORTHO05D005272 4.6e-48 194.5 113 88.5
Rhsim07G0132100 Rhododendron simsii HOM05D004396 ORTHO05D005272 4.6e-48 194.5 118 87.3
Duzib205G0471 Durio zibethinus HOM05D004396 ORTHO05D005272 6.0e-48 194.1 119 86.6
Hund10776 Selenicereus undatus HOM05D004396 ORTHO05D005272 6.0e-48 194.1 118 89.8
TWI81G0111 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 6.0e-48 194.1 118 88.1
Ciclev10002883m.g Citrus clementina HOM05D004396 ORTHO05D005272 7.8e-48 193.7 118 88.1
PGSC0003DMG400018505 Solanum tuberosum HOM05D004396 ORTHO05D005272 7.8e-48 193.7 118 83.1
ATR0626G058 Amborella trichopoda HOM05D004396 ORTHO05D005272 1.0e-47 193.4 115 87.0
Haze_08163 Corylus avellana HOM05D004396 ORTHO05D005272 1.3e-47 193.0 114 86.8
Nn3g19387 Nelumbo nucifera HOM05D004396 ORTHO05D005272 1.3e-47 193.0 118 87.3
CiPaw.11G098400 Carya illinoinensis HOM05D004396 ORTHO05D005272 2.3e-47 192.2 114 87.7
Eucgr.H00688 Eucalyptus grandis HOM05D004396 ORTHO05D005272 2.3e-47 192.2 110 90.9
Potri.003G096800 Populus trichocarpa HOM05D004396 ORTHO05D005272 2.3e-47 192.2 114 87.7
THA.LOC104798491 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 2.3e-47 192.2 118 87.3
TAR375G0183 Trochodendron aralioides HOM05D004396 ORTHO05D005272 2.3e-47 192.2 114 87.7
Migut.A01174 Erythranthe guttata HOM05D004396 ORTHO05D005272 3.0e-47 191.8 119 87.4
Manes.12G090054 Manihot esculenta HOM05D004396 ORTHO05D005272 3.0e-47 191.8 118 88.1
THA.LOC104814414 Tarenaya hassleriana HOM05D004396 ORTHO05D005272 3.0e-47 191.8 118 88.1
Lsat_1_v5_gn_3_19181 Lactuca sativa HOM05D004396 ORTHO05D005272 3.9e-47 191.4 120 86.7
Prupe.4G286900 Prunus persica HOM05D004396 ORTHO05D005272 3.9e-47 191.4 115 89.6
Sabra03G0065300 Salix brachista HOM05D004396 ORTHO05D005272 6.6e-47 190.7 114 87.7
Sc01g0005580 Simmondsia chinensis HOM05D004396 ORTHO05D005272 6.6e-47 190.7 118 87.3
Gohir.A12G206100 Gossypium hirsutum HOM05D004396 ORTHO05D005272 8.6e-47 190.3 119 85.7
Gohir.D12G208400 Gossypium hirsutum HOM05D004396 ORTHO05D005272 8.6e-47 190.3 119 85.7
Gorai.008G224000 Gossypium raimondii HOM05D004396 ORTHO05D005272 8.6e-47 190.3 119 85.7
Manes.04G055632 Manihot esculenta HOM05D004396 ORTHO05D005272 8.6e-47 190.3 118 86.4
PSO339G1317 Papaver somniferum HOM05D004396 ORTHO05D005272 8.6e-47 190.3 115 86.1
PSO384G3027 Papaver somniferum HOM05D004396 ORTHO05D005272 8.6e-47 190.3 115 86.1
PSO541G6011 Papaver somniferum HOM05D004396 ORTHO05D005272 8.6e-47 190.3 115 86.1
PSO675G8737 Papaver somniferum HOM05D004396 ORTHO05D005272 1.5e-46 189.5 115 87.0
PGR031G0362 Punica granatum HOM05D004396 ORTHO05D005272 1.5e-46 189.5 118 85.6
PGR031G2119 Punica granatum HOM05D004396 ORTHO05D005272 1.5e-46 189.5 118 85.6
SalBow1G7612 Salvia bowleyana HOM05D004396 ORTHO05D005272 1.5e-46 189.5 118 85.6
AL4G31570 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 1.9e-46 189.1 118 83.9
Prupe.8G007900 Prunus persica HOM05D004396 ORTHO05D005272 1.9e-46 189.1 115 87.8
TWI60G0023 Tripterygium wilfordii HOM05D004396 ORTHO05D005272 1.9e-46 189.1 118 85.6
Thhalv10017441m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 4.3e-46 188.0 118 84.7
FAN20G1930 Fragaria x ananassa HOM05D004396 ORTHO05D005272 4.3e-46 188.0 115 86.1
FAN27G1914 Fragaria x ananassa HOM05D004396 ORTHO05D005272 4.3e-46 188.0 115 86.1
AT1G32210 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 5.6e-46 187.6 114 86.8
MD05G1007700 Malus domestica HOM05D004396 ORTHO05D005272 9.5e-46 186.8 115 87.0
Carub.0001s3054 Capsella rubella HOM05D004396 ORTHO05D005272 1.2e-45 186.4 114 86.8
CARHR129690 Cardamine hirsuta HOM05D004396 ORTHO05D005272 1.2e-45 186.4 114 85.1
FAN24G1987 Fragaria x ananassa HOM05D004396 ORTHO05D005272 1.2e-45 186.4 115 85.2
Sp1g27890 Schrenkiella parvula HOM05D004396 ORTHO05D005272 1.2e-45 186.4 114 86.8
AL1G46340 Arabidopsis lyrata HOM05D004396 ORTHO05D005272 1.6e-45 186.0 114 86.0
AT2G35520 Arabidopsis thaliana HOM05D004396 ORTHO05D005272 1.6e-45 186.0 114 85.1
CARHR031580 Cardamine hirsuta HOM05D004396 ORTHO05D005272 1.6e-45 186.0 114 86.0
Thhalv10009144m.g Eutrema salsugineum HOM05D004396 ORTHO05D005272 1.6e-45 186.0 114 86.0
Lsat_1_v5_gn_6_80060 Lactuca sativa HOM05D004396 ORTHO05D005272 2.1e-45 185.7 111 90.1
MD10G1005100 Malus domestica HOM05D004396 ORTHO05D005272 2.1e-45 185.7 115 87.8
RcHm_v2.0_Chr6g0251281 Rosa chinensis HOM05D004396 ORTHO05D005272 2.1e-45 185.7 115 86.1
ClCG10G001270 Citrullus lanatus HOM05D004396 ORTHO05D005272 3.6e-45 184.9 118 83.9
FvH4_2g00930 Fragaria vesca HOM05D004396 ORTHO05D005272 3.6e-45 184.9 112 86.6
Os04g0397000 Oryza sativa ssp. japonica HOM05D004396 ORTHO05D005272 3.6e-45 184.9 112 84.8
arahy.Tifrunner.gnm1.ann1.Z3U2VZ Arachis hypogaea HOM05D004396 ORTHO05D005272 4.7e-45 184.5 118 85.6
BcaB07g32895 Brassica carinata HOM05D004396 ORTHO05D005272 4.7e-45 184.5 114 86.0
BraA09t38945Z Brassica rapa HOM05D004396 ORTHO05D005272 4.7e-45 184.5 114 86.0
BcaB03g13752 Brassica carinata HOM05D004396 ORTHO05D005272 6.2e-45 184.1 114 85.1
BcaB04g17995 Brassica carinata HOM05D004396 ORTHO05D005272 6.2e-45 184.1 114 85.1
BcaC05g27252 Brassica carinata HOM05D004396 ORTHO05D005272 8.1e-45 183.7 114 85.1
C05p31610 Brassica napus HOM05D004396 ORTHO05D005272 8.1e-45 183.7 114 85.1
TPR.G19425 Trifolium pratense HOM05D004396 ORTHO05D005272 8.1e-45 183.7 115 84.3
Lj2g0004535 Lotus japonicus HOM05D004396 ORTHO05D005272 1.1e-44 183.3 118 83.9
A05p25120 Brassica napus HOM05D004396 ORTHO05D005272 1.4e-44 183.0 114 84.2
BraA05t21392Z Brassica rapa HOM05D004396 ORTHO05D005272 1.4e-44 183.0 114 84.2
Ca_25178_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 1.4e-44 183.0 115 83.5
Phvul.002G136700 Phaseolus vulgaris HOM05D004396 ORTHO05D005272 1.4e-44 183.0 118 84.7
Carub.0004s1721 Capsella rubella HOM05D004396 ORTHO05D005272 1.8e-44 182.6 114 82.5
HPP92_025493 Vanilla planifolia HOM05D004396 ORTHO05D005272 1.8e-44 182.6 114 83.3
Zm00001eb379050 Zea mays HOM05D004396 ORTHO05D005272 1.8e-44 182.6 112 83.9
CsaV3_3G001340 Cucumis sativus L. HOM05D004396 ORTHO05D005272 3.1e-44 181.8 118 83.1
Sabra01G0105900 Salix brachista HOM05D004396 ORTHO05D005272 3.1e-44 181.8 127 76.4
SEGI_22391 Sequoiadendron giganteum HOM05D004396 ORTHO05D005272 4.0e-44 181.4 115 79.1
Lalb_Chr05g0215751 Lupinus albus HOM05D004396 ORTHO05D005272 6.8e-44 180.6 114 84.2
Medtr3g023120 Medicago truncatula HOM05D004396 ORTHO05D005272 6.8e-44 180.6 114 83.3
SMO117G0136 Selaginella moellendorffii HOM05D004396 ORTHO05D005272 6.8e-44 180.6 110 83.6
HPP92_025445 Vanilla planifolia HOM05D004396 ORTHO05D005272 6.8e-44 180.6 114 82.5
VMungo1215G3227 Vigna mungo HOM05D004396 ORTHO05D005272 6.8e-44 180.6 112 85.7
Medtr5g029240 Medicago truncatula HOM05D004396 ORTHO05D005272 1.2e-43 179.9 111 84.7
Cpa.g.sc42.149 Carica papaya HOM05D004396 ORTHO05D005272 1.5e-43 179.5 110 87.3
Lalb_Chr16g0381071 Lupinus albus HOM05D004396 ORTHO05D005272 1.5e-43 179.5 118 81.4
Ca_27048_v3 Cicer arietinum L. HOM05D004396 ORTHO05D005272 2.6e-43 178.7 115 82.6
Glyma.09G207800 Glycine max HOM05D004396 ORTHO05D005272 2.6e-43 178.7 111 84.7
TPR.G31993 Trifolium pratense HOM05D004396 ORTHO05D005272 5.8e-43 177.6 114 82.5
Psat5g213400 Pisum sativum HOM05D004396 ORTHO05D005272 1.3e-42 176.4 114 81.6
Mapoly0046s0003 Marchantia polymorpha HOM05D004396 ORTHO05D005272 2.9e-42 175.3 118 76.3
EL10Ac5g11811 Beta vulgaris HOM05D004396 ORTHO05D005272 3.7e-42 174.9 150 68.0
Lj4g0004552 Lotus japonicus HOM05D004396 ORTHO05D005272 4.1e-41 171.4 114 78.1
Gohir.A03G000033 Gossypium hirsutum HOM05D004396 ORTHO05D005272 7.1e-41 170.6 178 58.4
Glyma.14G201900 Glycine max HOM05D004396 ORTHO05D005272 6.0e-40 167.5 114 78.1
Pp3c2_30990 Physcomitrium patens HOM05D004396 ORTHO05D005272 7.8e-40 167.2 115 72.2
Gohir.D03G176200 Gossypium hirsutum HOM05D004396 ORTHO05D005272 1.5e-38 162.9 119 77.3
AagrBONN_evm.TU.Sc2ySwM_362.1218 Anthoceros agrestis HOM05D000444 ORTHO05D000489 5.2e-36 154.5 108 73.1
Migut.E00744 Erythranthe guttata HOM05D004396 ORTHO05D005272 5.2e-36 154.5 89 92.1
Peaxi162Scf00045g00321 Petunia axillaris HOM05D004396 ORTHO05D005272 2.0e-35 152.5 90 84.4
BolC3t13671H Brassica oleracea HOM05D004396 ORTHO05D005272 2.9e-34 148.7 197 49.2
AUR62036328 Chenopodium quinoa HOM05D004396 ORTHO05D005272 1.3e-31 139.8 87 85.1
Cfa012506 Carpinus fangiana HOM05D004396 ORTHO05D005272 6.6e-31 137.5 82 86.6
CiPaw.12G068300 Carya illinoinensis HOM05D004396 ORTHO05D005272 1.1e-30 136.7 91 78.0
Ciclev10013120m.g Citrus clementina HOM05D004396 ORTHO05D005272 4.3e-30 134.8 104 74.0
MBI02_g15155_MAGBIO Magnolia biondii HOM05D004396 ORTHO05D005272 4.3e-30 134.8 73 90.4
BolC5t31884H Brassica oleracea HOM05D004396 ORTHO05D005272 1.6e-29 132.9 83 83.1
CAN.G1987.1 Capsicum annuum HOM05D004396 ORTHO05D005272 2.1e-29 132.5 74 91.9
arahy.Tifrunner.gnm1.ann1.KG0UNZ Arachis hypogaea HOM05D004396 ORTHO05D005272 2.8e-29 132.1 87 82.8
Nn1g00212 Nelumbo nucifera HOM05D004396 ORTHO05D005272 1.1e-28 130.2 86 79.1
Sed0012676 Sechium edule HOM05D004396 ORTHO05D005272 1.8e-28 129.4 87 78.2
Psat2g139040 Pisum sativum HOM05D004396 ORTHO05D005272 4.4e-27 124.8 68 92.6
A08p09310 Brassica napus HOM05D004396 ORTHO05D005272 5.8e-27 124.4 106 68.9
BraA08t32929Z Brassica rapa HOM05D004396 ORTHO05D005272 5.8e-27 124.4 106 68.9
CBR_g15971 Chara braunii HOM05D004396 ORTHO05D005272 1.9e-25 119.4 110 58.2
Aa31LG2G13800 Aethionema arabicum HOM05D004396 ORTHO05D005272 2.7e-24 115.5 80 76.2
Sc24g0004110 Simmondsia chinensis HOM05D004396 ORTHO05D005272 4.6e-24 114.8 74 83.8
Ah.02g116090 Amaranthus hybridus HOM05D002241 ORTHO05D002458 1.0e-23 113.6 70 84.3
Cre02.g108400 Chlamydomonas reinhardtii HOM05D004396 ORTHO05D005272 1.3e-23 113.2 106 50.9
Atru.chr6.1524 Acer truncatum HOM05D004396 ORTHO05D005272 1.1e-22 110.2 87 71.3
FAN15G2154 Fragaria x ananassa HOM05D004396 ORTHO05D005272 1.1e-22 110.2 71 80.3
BolC8t47998H Brassica oleracea HOM05D004396 ORTHO05D005272 1.7e-18 96.3 105 60.0
Pp3c1_6120 Physcomitrium patens HOM05D004396 ORTHO05D005272 1.7e-18 96.3 70 67.1
Hund15006 Selenicereus undatus HOM05D004396 ORTHO05D005272 2.5e-14 82.4 61 70.5
C03p12000 Brassica napus HOM05D004396 ORTHO05D023989 1.6e-08 63.2 48 68.8
RcHm_v2.0_Chr6g0251331 Rosa chinensis HOM05D004396 ORTHO05D005272 1.3e-07 60.1 59 62.7
TPR.G36203 Trifolium pratense HOM05D004396 ORTHO05D005272 1.8e-07 59.7 42 76.2
A09p33990 Brassica napus HOM05D004396 ORTHO05D005272 2.3e-07 59.3 43 72.1
C05p39130 Brassica napus HOM05D004396 ORTHO05D005272 3.0e-07 58.9 41 75.6
BolC5t32648H Brassica oleracea HOM05D004396 ORTHO05D005272 3.0e-07 58.9 41 75.6
RcHm_v2.0_Chr6g0251311 Rosa chinensis HOM05D004396 ORTHO05D005272 1.1e-06 57.0 42 73.8


User provided reference genes

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