Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15386 Utricularia gibba HOM05D005008 ORTHO05D006092 4.7e-85 317.8 155 100.0
unitig_746.g26601 Utricularia gibba HOM05D005008 ORTHO05D006092 1.3e-74 283.1 141 96.5
MSTRG.18800 Avicennia marina HOM05D005008 ORTHO05D006092 5.1e-63 244.6 142 79.6
MSTRG.21002 Avicennia marina HOM05D005008 ORTHO05D006092 6.8e-60 234.2 142 76.8
Oeu031444.1 Olea europaea HOM05D005008 ORTHO05D006092 2.0e-59 232.6 142 74.6
Migut.D02371 Erythranthe guttata HOM05D005008 ORTHO05D006092 3.4e-59 231.9 134 79.9
Migut.D02374 Erythranthe guttata HOM05D005008 ORTHO05D006092 3.4e-59 231.9 134 79.9
Nitab4.5_0003644g0030 Nicotiana tabacum HOM05D005008 ORTHO05D006092 1.2e-53 213.4 144 72.2
SGA_v2.0_scaffold114G31950 Striga asiatica HOM05D005008 ORTHO05D006092 2.1e-53 212.6 142 68.3
Nitab4.5_0002426g0070 Nicotiana tabacum HOM05D005008 ORTHO05D006092 2.8e-53 212.2 140 72.1
Dinv18863 Davidia involucrata HOM05D005008 ORTHO05D006092 3.6e-53 211.8 133 75.9
Nitab4.5_0015902g0010 Nicotiana tabacum HOM05D005008 ORTHO05D006092 6.2e-53 211.1 144 71.5
Manes.11G103800 Manihot esculenta HOM05D005008 ORTHO05D006092 1.4e-52 209.9 138 71.7
Sopen11g029460 Solanum pennellii HOM05D005008 ORTHO05D006092 1.8e-52 209.5 133 75.9
PGSC0003DMG400002990 Solanum tuberosum HOM05D005008 ORTHO05D006092 2.4e-52 209.1 133 75.9
CAN.G1463.18 Capsicum annuum HOM05D005008 ORTHO05D006092 3.1e-52 208.8 144 70.8
Peaxi162Scf00717g00217 Petunia axillaris HOM05D005008 ORTHO05D006092 3.1e-52 208.8 133 75.2
Nitab4.5_0005569g0020 Nicotiana tabacum HOM05D005008 ORTHO05D006092 5.2e-52 208.0 140 70.7
Solyc06g073900.3 Solanum lycopersicum HOM05D005008 ORTHO05D006092 1.2e-51 206.8 140 70.7
Sopen06g030300 Solanum pennellii HOM05D005008 ORTHO05D006092 1.2e-51 206.8 140 70.7
PGSC0003DMG400005906 Solanum tuberosum HOM05D005008 ORTHO05D006092 1.5e-51 206.5 140 70.7
Cc01_g07910 Coffea canephora HOM05D005008 ORTHO05D006092 3.4e-51 205.3 140 70.7
Solyc11g071790.2 Solanum lycopersicum HOM05D005008 ORTHO05D006092 7.6e-51 204.1 133 75.2
PGR083G2197 Punica granatum HOM05D005008 ORTHO05D006092 9.9e-51 203.8 141 69.5
CsaV3_1G043620 Cucumis sativus L. HOM05D005008 ORTHO05D006092 1.7e-50 203.0 133 71.4
Dinv21730 Davidia involucrata HOM05D005008 ORTHO05D006092 3.8e-50 201.8 132 73.5
Peaxi162Scf00098g00148 Petunia axillaris HOM05D005008 ORTHO05D006092 8.4e-50 200.7 144 68.8
CiPaw.13G126400 Carya illinoinensis HOM05D005008 ORTHO05D006092 1.1e-49 200.3 133 69.9
Hma1.2p1_0101F.1_g049710 Hydrangea macrophylla HOM05D005008 ORTHO05D006092 1.4e-49 199.9 141 68.1
Rhsim13G0198500 Rhododendron simsii HOM05D005008 ORTHO05D006092 1.9e-49 199.5 143 65.7
MELO3C015091.2 Cucumis melo HOM05D005008 ORTHO05D006092 2.4e-49 199.1 133 69.9
Sabra09G0000700 Salix brachista HOM05D005008 ORTHO05D006092 7.1e-49 197.6 132 68.9
Duzib170G0524 Durio zibethinus HOM05D005008 ORTHO05D006092 1.6e-48 196.4 133 70.7
Eucgr.J00592 Eucalyptus grandis HOM05D005008 ORTHO05D006092 3.5e-48 195.3 132 68.9
CSS0002518 Camellia sinensis var. sinensis HOM05D005008 ORTHO05D006092 1.0e-47 193.7 132 69.7
Cfa010212 Carpinus fangiana HOM05D005008 ORTHO05D006092 1.0e-47 193.7 134 69.4
ClCG03G012390 Citrullus lanatus HOM05D005008 ORTHO05D006092 1.0e-47 193.7 132 68.2
Thhalv10019305m.g Eutrema salsugineum HOM05D005008 ORTHO05D006092 1.0e-47 193.7 132 70.5
MD11G1175100 Malus domestica HOM05D005008 ORTHO05D006092 1.0e-47 193.7 140 66.4
Sed0018780 Sechium edule HOM05D005008 ORTHO05D006092 1.3e-47 193.4 133 66.9
Duzib168G2291 Durio zibethinus HOM05D005008 ORTHO05D006092 1.7e-47 193.0 133 68.4
Sp1g07130 Schrenkiella parvula HOM05D005008 ORTHO05D006092 1.7e-47 193.0 139 67.6
Thecc.09G268300 Theobroma cacao HOM05D005008 ORTHO05D006092 2.3e-47 192.6 133 68.4
Potri.009G001100 Populus trichocarpa HOM05D005008 ORTHO05D006092 3.9e-47 191.8 132 66.7
Atru.chr3.3067 Acer truncatum HOM05D005008 ORTHO05D006092 5.1e-47 191.4 141 62.4
THA.LOC104808952 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 5.1e-47 191.4 134 67.9
RcHm_v2.0_Chr5g0049161 Rosa chinensis HOM05D005008 ORTHO05D006092 8.7e-47 190.7 132 66.7
Glyma.20G018300 Glycine max HOM05D005008 ORTHO05D006092 1.1e-46 190.3 132 65.9
TPR.G38259 Trifolium pratense HOM05D005008 ORTHO05D006092 1.5e-46 189.9 132 66.7
Prupe.6G148300 Prunus persica HOM05D005008 ORTHO05D006092 1.9e-46 189.5 132 66.7
VMungo0251G1441 Vigna mungo HOM05D005008 ORTHO05D006092 2.5e-46 189.1 133 65.4
Phvul.002G096700 Phaseolus vulgaris HOM05D005008 ORTHO05D006092 5.6e-46 188.0 132 65.9
Ciclev10029485m.g Citrus clementina HOM05D005008 ORTHO05D006092 7.3e-46 187.6 132 68.2
vmacro04058 Vaccinium macrocarpon HOM05D005008 ORTHO05D006092 9.6e-46 187.2 134 67.2
MD03G1160100 Malus domestica HOM05D005008 ORTHO05D006092 1.3e-45 186.8 153 59.5
GSVIVG01028464001 Vitis vinifera HOM05D005008 ORTHO05D006092 2.8e-45 185.7 140 59.3
AT1G08480 Arabidopsis thaliana HOM05D005008 ORTHO05D006092 3.6e-45 185.3 139 64.7
CARHR008370 Cardamine hirsuta HOM05D005008 ORTHO05D006092 3.6e-45 185.3 139 64.0
RcHm_v2.0_Chr7g0230441 Rosa chinensis HOM05D005008 ORTHO05D006092 3.6e-45 185.3 132 66.7
Carub.0001s0784 Capsella rubella HOM05D005008 ORTHO05D006092 8.1e-45 184.1 139 63.3
BraA06t23756Z Brassica rapa HOM05D005008 ORTHO05D006092 1.4e-44 183.3 132 68.2
Gohir.D08G017500 Gossypium hirsutum HOM05D005008 ORTHO05D006092 2.4e-44 182.6 133 65.4
Gorai.004G011900 Gossypium raimondii HOM05D005008 ORTHO05D006092 2.4e-44 182.6 133 65.4
THA.LOC104815294 Tarenaya hassleriana HOM05D005008 ORTHO05D006092 2.4e-44 182.6 139 62.6
Gohir.A08G007400 Gossypium hirsutum HOM05D005008 ORTHO05D006092 3.1e-44 182.2 133 65.4
Psat7g129160 Pisum sativum HOM05D005008 ORTHO05D006092 5.3e-44 181.4 132 62.9
A06p05480 Brassica napus HOM05D005008 ORTHO05D006092 6.9e-44 181.0 132 67.4
BcaB03g13330 Brassica carinata HOM05D005008 ORTHO05D006092 9.0e-44 180.6 129 68.2
Lalb_Chr16g0385131 Lupinus albus HOM05D005008 ORTHO05D006092 9.0e-44 180.6 130 65.4
BraA08t35421Z Brassica rapa HOM05D005008 ORTHO05D006092 1.2e-43 180.3 133 66.9
Ca_18750_v3 Cicer arietinum L. HOM05D005008 ORTHO05D006092 1.2e-43 180.3 132 63.6
Sc21g0006720 Simmondsia chinensis HOM05D005008 ORTHO05D006092 1.2e-43 180.3 143 58.7
TPR.G27448 Trifolium pratense HOM05D005008 ORTHO05D006092 1.2e-43 180.3 149 56.4
Hund18808 Selenicereus undatus HOM05D005008 ORTHO05D006092 2.0e-43 179.5 132 63.6
TAR628G1298 Trochodendron aralioides HOM05D005008 ORTHO05D006092 2.0e-43 179.5 140 59.3
A08p35120 Brassica napus HOM05D005008 ORTHO05D006092 3.4e-43 178.7 133 66.2
Lsat_1_v5_gn_6_104840 Lactuca sativa HOM05D005008 ORTHO05D006092 3.4e-43 178.7 130 65.4
BcaB07g34092 Brassica carinata HOM05D005008 ORTHO05D006092 4.4e-43 178.3 129 68.2
C05p06590 Brassica napus HOM05D005008 ORTHO05D006092 4.4e-43 178.3 129 68.2
BolC5t29419H Brassica oleracea HOM05D005008 ORTHO05D006092 4.4e-43 178.3 129 68.2
Medtr4g084320 Medicago truncatula HOM05D005008 ORTHO05D006092 5.8e-43 177.9 132 62.9
FAN08G1342 Fragaria x ananassa HOM05D005008 ORTHO05D006092 7.6e-43 177.6 128 67.2
Aa31LG5G14080 Aethionema arabicum HOM05D005008 ORTHO05D006092 2.2e-42 176.0 131 65.6
ATR1136G073 Amborella trichopoda HOM05D005008 ORTHO05D006092 2.2e-42 176.0 131 61.1
Sc12g0000410 Simmondsia chinensis HOM05D005008 ORTHO05D006092 2.2e-42 176.0 140 60.7
FAN04G2231 Fragaria x ananassa HOM05D005008 ORTHO05D006092 2.9e-42 175.6 128 66.4
AL1G18910 Arabidopsis lyrata HOM05D005008 ORTHO05D006092 3.8e-42 175.3 156 57.1
FAN13G1722 Fragaria x ananassa HOM05D005008 ORTHO05D006092 3.8e-42 175.3 128 66.4
BcaC07g38394 Brassica carinata HOM05D005008 ORTHO05D006092 4.9e-42 174.9 133 65.4
C08p11520 Brassica napus HOM05D005008 ORTHO05D006092 4.9e-42 174.9 133 65.4
BolC8t48832H Brassica oleracea HOM05D005008 ORTHO05D006092 4.9e-42 174.9 133 65.4
Lalb_Chr05g0219631 Lupinus albus HOM05D005008 ORTHO05D006092 4.9e-42 174.9 130 64.6
FAN18G0191 Fragaria x ananassa HOM05D005008 ORTHO05D006092 6.4e-42 174.5 128 66.4
arahy.Tifrunner.gnm1.ann1.LRUS99 Arachis hypogaea HOM05D005008 ORTHO05D006092 1.9e-41 172.9 134 60.4
Aa31LG2G20300 Aethionema arabicum HOM05D005008 ORTHO05D006092 3.2e-41 172.2 127 66.1
COL.COLO4_25364 Corchorus olitorius HOM05D005008 ORTHO05D006092 4.2e-41 171.8 128 64.8
EL10Ac7g16268 Beta vulgaris HOM05D005008 ORTHO05D006092 9.3e-41 170.6 134 60.4
HanXRQChr05g0163331 Helianthus annuus HOM05D005008 ORTHO05D006092 2.1e-40 169.5 129 64.3
ECA246G4934 Erigeron canadensis HOM05D005008 ORTHO05D006092 2.7e-40 169.1 122 67.2
arahy.Tifrunner.gnm1.ann1.0IE2SQ Arachis hypogaea HOM05D005008 ORTHO05D006092 3.5e-40 168.7 134 59.7
Lj2g0024950 Lotus japonicus HOM05D005008 ORTHO05D006092 3.5e-40 168.7 138 58.7
Aqoxy7G02777 Aquilegia oxysepala HOM05D005008 ORTHO05D006092 1.0e-39 167.2 131 61.1
AUR62001577 Chenopodium quinoa HOM05D005008 ORTHO05D006092 1.0e-39 167.2 132 60.6
Lj2E351T1 Lonicera japonica HOM05D005008 ORTHO05D006092 2.3e-39 166.0 119 68.1
arahy.Tifrunner.gnm1.ann1.L1LZAQ Arachis hypogaea HOM05D005008 ORTHO05D006092 1.1e-38 163.7 125 61.6
QL02p021765 Quercus lobata HOM05D005008 ORTHO05D006092 9.6e-38 160.6 210 44.8
TWI31G0222 Tripterygium wilfordii HOM05D005008 ORTHO05D006092 1.3e-37 160.2 125 64.8
CDE05G0523 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 2.8e-37 159.1 140 52.1
CDE04G3167 Ceratophyllum demersum HOM05D005008 ORTHO05D006092 3.6e-37 158.7 140 52.1
MBI17_g21974_MAGBIO Magnolia biondii HOM05D005008 ORTHO05D006092 6.2e-37 157.9 127 56.7
MBI17_g21976_MAGBIO Magnolia biondii HOM05D000527 ORTHO05D000559 1.1e-36 157.1 124 58.9
arahy.Tifrunner.gnm1.ann1.67HGNM Arachis hypogaea HOM05D005008 ORTHO05D006092 4.5e-35 151.8 116 62.1
PSO325G0018 Papaver somniferum HOM05D005008 ORTHO05D006092 3.2e-33 145.6 131 55.0
SEGI_09212 Sequoiadendron giganteum HOM05D005008 ORTHO05D006092 3.2e-33 145.6 139 51.8
DCAR_021985 Daucus carota HOM05D005008 ORTHO05D006092 7.1e-33 144.4 125 56.0
PSO144G0132 Papaver somniferum HOM05D005008 ORTHO05D006092 2.7e-32 142.5 132 53.8
SalBow6G2115 Salvia bowleyana HOM05D005008 ORTHO05D006092 1.0e-31 140.6 181 45.3
Ah.01g003330 Amaranthus hybridus HOM05D005008 ORTHO05D006092 1.6e-29 133.3 212 38.7
Zm00001eb173990 Zea mays HOM05D005008 ORTHO05D006092 8.1e-29 131.0 131 46.6
Zm00001eb260600 Zea mays HOM05D005008 ORTHO05D006092 1.1e-28 130.6 131 46.6
Os08g0112800 Oryza sativa ssp. japonica HOM05D005008 ORTHO05D006092 5.3e-28 128.3 133 45.9
PSO478G0762 Papaver somniferum HOM05D005008 ORTHO05D006092 2.0e-27 126.3 117 50.4
PSO017G3706 Papaver somniferum HOM05D005008 ORTHO05D006092 1.7e-26 123.2 117 50.4
PSO017G4122 Papaver somniferum HOM05D005008 ORTHO05D006092 6.5e-26 121.3 117 49.6
Nn1g08680 Nelumbo nucifera HOM05D005008 ORTHO05D006092 8.4e-26 120.9 80 73.8
HPP92_002034 Vanilla planifolia HOM05D005008 ORTHO05D006092 7.1e-25 117.9 133 45.1
Haze_23598 Corylus avellana HOM05D005008 ORTHO05D006092 4.6e-24 115.2 81 69.1
Sed0017043 Sechium edule HOM05D005008 ORTHO05D006092 6.0e-24 114.8 87 64.4
Atru.chr5.2770 Acer truncatum HOM05D005008 ORTHO05D006092 1.8e-23 113.2 101 58.4
PSO339G0217 Papaver somniferum HOM05D005008 ORTHO05D006092 2.3e-23 112.8 96 54.2
AUR62020205 Chenopodium quinoa HOM05D005008 ORTHO05D006092 4.3e-22 108.6 84 61.9
PSO541G3575 Papaver somniferum HOM05D005008 ORTHO05D006092 4.3e-22 108.6 96 53.1
FvH4_5g32770 Fragaria vesca HOM05D005008 ORTHO05D006092 5.7e-22 108.2 81 66.7
Mapoly0024s0049 Marchantia polymorpha HOM05D005008 ORTHO05D006092 8.4e-18 94.4 131 43.5
Pp3c7_24330 Physcomitrium patens HOM05D005008 ORTHO05D006092 1.6e-16 90.1 141 39.7
Pp3c1_6020 Physcomitrium patens HOM05D005008 ORTHO05D006092 1.0e-15 87.4 133 38.3
CBR_g29511 Chara braunii HOM05D005008 ORTHO05D006092 1.3e-15 87.0 140 35.7
BcaB07g32561 Brassica carinata HOM05D005008 ORTHO05D006092 5.7e-14 81.6 84 54.8
CBR_g36250 Chara braunii HOM05D005008 ORTHO05D006092 7.4e-14 81.3 133 34.6
PSO447G0120 Papaver somniferum HOM05D005008 ORTHO05D006092 2.8e-13 79.3 73 54.8
TPR.G18466 Trifolium pratense HOM05D005008 ORTHO05D006092 3.7e-13 79.0 81 45.7
Hma1.2p1_1258F.1_g270900 Hydrangea macrophylla HOM05D005008 ORTHO05D006092 1.0e-10 70.9 48 62.5
Hma1.2p1_1951F.1_g308770 Hydrangea macrophylla HOM05D005008 ORTHO05D006092 1.0e-10 70.9 48 62.5
Oeu026671.1 Olea europaea HOM05D005008 ORTHO05D006092 5.1e-07 58.5 37 75.7
SMO364G0346 Selaginella moellendorffii HOM05D005008 ORTHO05D006092 2.5e-06 56.2 102 34.3


User provided reference genes

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