Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 3.8e-37 157.5 73 100.0
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 4.0e-26 120.9 73 71.2
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 5.7e-25 117.1 70 70.0
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 5.7e-25 117.1 73 69.9
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 1.3e-24 115.9 73 67.1
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 1.3e-24 115.9 73 68.5
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.7e-24 115.5 70 68.6
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.7e-24 115.5 73 69.9
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.8e-24 114.8 73 69.9
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.8e-24 114.8 71 70.4
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 3.7e-24 114.4 73 71.2
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.3e-24 113.6 73 68.5
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 6.3e-24 113.6 73 65.8
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 8.3e-24 113.2 71 64.8
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 1.1e-23 112.8 73 67.1
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 1.1e-23 112.8 73 67.1
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 1.1e-23 112.8 73 69.9
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 1.1e-23 112.8 71 69.0
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.4e-23 112.5 73 64.4
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.8e-23 112.1 71 67.6
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 2.4e-23 111.7 71 69.0
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 3.1e-23 111.3 73 64.4
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 3.1e-23 111.3 73 64.4
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.1e-23 110.9 73 67.1
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 5.4e-23 110.5 73 65.8
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 7.0e-23 110.2 73 63.0
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 7.0e-23 110.2 73 64.4
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 9.1e-23 109.8 73 64.4
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 9.1e-23 109.8 73 65.8
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 9.1e-23 109.8 70 64.3
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.6e-22 109.0 73 64.4
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 2.7e-22 108.2 71 64.8
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 2.7e-22 108.2 69 66.7
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 2.7e-22 108.2 73 60.3
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 2.7e-22 108.2 73 67.1
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 5.9e-22 107.1 71 63.4
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 7.7e-22 106.7 73 64.4
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 7.7e-22 106.7 71 64.8
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.0e-21 106.3 73 64.4
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.0e-21 106.3 71 63.4
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 1.3e-21 105.9 73 63.0
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.7e-21 105.5 72 63.9
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.7e-21 105.5 72 61.1
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 2.3e-21 105.1 73 60.3
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 2.3e-21 105.1 72 59.7
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 2.9e-21 104.8 65 64.6
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.9e-21 104.8 65 64.6
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 3.8e-21 104.4 71 63.4
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 6.6e-21 103.6 73 61.6
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 6.6e-21 103.6 69 62.3
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 6.6e-21 103.6 71 63.4
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 8.6e-21 103.2 73 58.9
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 8.6e-21 103.2 70 62.9
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.1e-20 102.8 73 58.9
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.1e-20 102.8 73 58.9
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.5e-20 102.4 73 61.6
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.9e-20 102.1 71 59.2
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 1.9e-20 102.1 73 58.9
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.9e-20 102.1 73 60.3
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 2.5e-20 101.7 73 60.3
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 3.3e-20 101.3 73 58.9
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 4.2e-20 100.9 73 57.5
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 4.2e-20 100.9 73 57.5
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 5.5e-20 100.5 73 57.5
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 7.2e-20 100.1 73 57.5
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 7.2e-20 100.1 72 56.9
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 7.2e-20 100.1 73 60.3
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 9.5e-20 99.8 74 56.8
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-19 99.0 72 56.9
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.6e-19 99.0 72 56.9
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.6e-19 99.0 72 56.9
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 2.8e-19 98.2 74 58.1
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.8e-19 98.2 70 61.4
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 8.0e-19 96.7 81 55.6
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.0e-18 96.3 72 55.6
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.0e-18 96.3 72 56.9
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.4e-18 95.9 72 55.6
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 1.8e-18 95.5 73 57.5
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.3e-18 95.1 72 55.6
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.3e-18 95.1 72 55.6
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.3e-18 95.1 68 58.8
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 2.3e-18 95.1 68 58.8
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 3.0e-18 94.7 72 59.7
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 3.0e-18 94.7 71 59.2
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 4.0e-18 94.4 73 54.8
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 6.8e-18 93.6 73 53.4
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 6.8e-18 93.6 65 61.5
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 6.8e-18 93.6 65 61.5
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 8.9e-18 93.2 68 57.4
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 1.2e-17 92.8 67 61.2
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.5e-17 92.4 72 56.9
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 2.0e-17 92.0 72 58.3
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 2.0e-17 92.0 72 58.3
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 2.6e-17 91.7 72 56.9
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 2.6e-17 91.7 74 54.1
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 3.4e-17 91.3 73 56.2
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 4.4e-17 90.9 72 56.9
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 5.7e-17 90.5 72 56.9
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 5.7e-17 90.5 72 56.9
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 5.7e-17 90.5 71 57.7
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.3e-16 89.4 74 56.8
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 1.3e-16 89.4 74 52.7
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 1.3e-16 89.4 70 51.4
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 1.7e-16 89.0 72 56.9
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 2.2e-16 88.6 71 56.3
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 2.2e-16 88.6 72 55.6
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 3.7e-16 87.8 72 55.6
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.7e-16 87.8 72 54.2
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 3.7e-16 87.8 72 54.2
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 3.7e-16 87.8 72 55.6
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 3.7e-16 87.8 73 50.7
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 1.1e-15 86.3 72 55.6
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-15 86.3 72 51.4
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.8e-15 85.5 72 50.0
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 3.2e-15 84.7 70 50.0
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 3.9e-13 77.8 70 44.3
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 2.6e-09 65.1 74 37.8
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.7e-08 62.4 51 52.9
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.2e-08 62.0 37 70.3
CDE11G0759 Ceratophyllum demersum HOM05D006227 ORTHO05D129109 6.4e-08 60.5 53 49.1
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 6.4e-08 60.5 40 60.0
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 1.4e-07 59.3 35 68.6
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 3.5e-06 54.7 35 62.9
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 3.5e-06 54.7 35 65.7
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 4.6e-06 54.3 35 60.0


User provided reference genes

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