Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15324 Utricularia gibba HOM05D005245 ORTHO05D006388 0.0e+00 1604.3 884 100.0
Migut.M00189 Erythranthe guttata HOM05D005245 ORTHO05D006388 6.0e-153 545.8 665 48.9
SalBow7G1067 Salvia bowleyana HOM05D005245 ORTHO05D006388 1.3e-152 544.7 877 42.2
SGA_v2.0_scaffold106G30663 Striga asiatica HOM05D005245 ORTHO05D006388 5.3e-141 506.1 715 44.2
Oeu031086.1 Olea europaea HOM05D005245 ORTHO05D006388 1.5e-140 504.6 699 42.5
Nitab4.5_0002629g0110 Nicotiana tabacum HOM05D005245 ORTHO05D006388 4.7e-137 493.0 680 41.9
Sopen07g027400 Solanum pennellii HOM05D005245 ORTHO05D006388 4.4e-135 486.5 714 40.6
PGSC0003DMG400009404 Solanum tuberosum HOM05D005245 ORTHO05D006388 6.3e-134 482.6 696 41.5
Oeu000569.1 Olea europaea HOM05D005245 ORTHO05D006388 2.6e-132 477.2 640 40.9
Hma1.2p1_0002F.1_g002540 Hydrangea macrophylla HOM05D005245 ORTHO05D006388 3.8e-131 473.4 730 38.6
CSS0021355 Camellia sinensis var. sinensis HOM05D005245 ORTHO05D006388 5.2e-128 463.0 666 40.7
Lj8C105T4 Lonicera japonica HOM05D005245 ORTHO05D006388 5.2e-128 463.0 667 41.5
Oeu036088.3 Olea europaea HOM05D005245 ORTHO05D006388 1.1e-125 455.3 678 40.3
Peaxi162Scf00189g00017 Petunia axillaris HOM05D005245 ORTHO05D006388 1.1e-125 455.3 664 40.2
Nitab4.5_0006823g0030 Nicotiana tabacum HOM05D005245 ORTHO05D006388 3.1e-125 453.8 778 37.7
Dinv03891 Davidia involucrata HOM05D005245 ORTHO05D006388 7.0e-125 452.6 589 43.8
CAN.G1543.11 Capsicum annuum HOM05D005245 ORTHO05D006388 3.0e-120 437.2 794 36.8
Solyc07g053440.4 Solanum lycopersicum HOM05D005245 ORTHO05D006388 8.2e-118 429.1 703 37.7
TWI23G1119 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 1.0e-112 412.1 653 42.7
Thecc.01G241800 Theobroma cacao HOM05D005245 ORTHO05D006388 4.4e-111 406.8 673 38.6
Duzib264G0025 Durio zibethinus HOM05D005245 ORTHO05D006388 9.8e-111 405.6 674 39.3
Gohir.A10G153600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 9.8e-111 405.6 653 40.1
Gohir.D10G112600 Gossypium hirsutum HOM05D005245 ORTHO05D006388 1.3e-110 405.2 662 39.6
Gorai.011G124400 Gossypium raimondii HOM05D005245 ORTHO05D006388 3.7e-110 403.7 662 39.4
TWI59G0121 Tripterygium wilfordii HOM05D005245 ORTHO05D006388 3.7e-110 403.7 671 39.8
Sabra19G0105000 Salix brachista HOM05D005245 ORTHO05D006388 2.0e-108 397.9 696 37.9
Nn1g09000 Nelumbo nucifera HOM05D005245 ORTHO05D006388 1.0e-107 395.6 649 37.4
GSVIVG01020660001 Vitis vinifera HOM05D005245 ORTHO05D006388 3.8e-107 393.7 661 37.2
TAR316G0002 Trochodendron aralioides HOM05D005245 ORTHO05D006388 1.5e-106 391.7 636 36.5
TAR626G0262 Trochodendron aralioides HOM05D005245 ORTHO05D006388 2.5e-106 391.0 639 35.8
Potri.013G119700 Populus trichocarpa HOM05D005245 ORTHO05D006388 9.5e-106 389.0 684 37.1
Haze_13315 Corylus avellana HOM05D005245 ORTHO05D006388 2.8e-105 387.5 681 37.6
Potri.019G091700 Populus trichocarpa HOM05D005245 ORTHO05D006388 2.8e-105 387.5 674 36.4
Dinv19977 Davidia involucrata HOM05D005245 ORTHO05D006388 6.1e-105 386.3 661 35.9
Cpa.g.sc209.10 Carica papaya HOM05D005245 ORTHO05D006388 1.8e-104 384.8 719 37.8
Actinidia39337 Actinidia chinensis HOM05D005245 ORTHO05D006388 3.0e-104 384.0 747 34.4
Manes.13G138100 Manihot esculenta HOM05D005245 ORTHO05D006388 4.0e-104 383.6 666 37.8
Rhsim04G0072600 Rhododendron simsii HOM05D005245 ORTHO05D006388 3.8e-99 367.1 918 31.0
MD17G1128800 Malus domestica HOM05D005245 ORTHO05D006388 1.2e-97 362.1 723 34.3
Prupe.8G044600 Prunus persica HOM05D005245 ORTHO05D006388 6.1e-97 359.8 712 35.3
Ca_18900_v3 Cicer arietinum L. HOM05D005245 ORTHO05D006388 1.0e-96 359.0 671 36.4
CsaV3_6G015240 Cucumis sativus L. HOM05D005245 ORTHO05D006388 4.0e-96 357.1 703 35.4
Actinidia30446 Actinidia chinensis HOM05D005245 ORTHO05D006388 3.4e-95 354.0 701 34.7
Lalb_Chr19g0134981 Lupinus albus HOM05D005245 ORTHO05D006388 5.8e-95 353.2 714 34.7
Cfa014695 Carpinus fangiana HOM05D005245 ORTHO05D006388 2.2e-94 351.3 775 32.6
ClCG02G018020 Citrullus lanatus HOM05D005245 ORTHO05D006388 2.9e-94 350.9 815 35.1
Ciclev10014152m.g Citrus clementina HOM05D005245 ORTHO05D006388 8.3e-94 349.4 700 35.9
Sc12g0003330 Simmondsia chinensis HOM05D005245 ORTHO05D006388 1.4e-93 348.6 701 34.4
PGR042G2390 Punica granatum HOM05D005245 ORTHO05D006388 1.9e-93 348.2 679 35.6
THA.LOC104822691 Tarenaya hassleriana HOM05D005245 ORTHO05D006388 2.4e-93 347.8 675 35.3
QL08p043062 Quercus lobata HOM05D005245 ORTHO05D006388 4.1e-93 347.1 741 34.7
EL10Ac9g20856 Beta vulgaris HOM05D005245 ORTHO05D006388 2.7e-92 344.4 713 33.8
CiPaw.04G130500 Carya illinoinensis HOM05D005245 ORTHO05D006388 2.7e-92 344.4 799 31.0
CANSAT64G0642 Cannabis sativa HOM05D005245 ORTHO05D006388 8.6e-91 339.3 743 33.5
Lsat_1_v5_gn_8_137601 Lactuca sativa HOM05D005245 ORTHO05D006388 3.3e-90 337.4 726 33.7
VMungo1127G0185 Vigna mungo HOM05D005245 ORTHO05D006388 3.3e-90 337.4 701 34.1
Lalb_Chr01g0005921 Lupinus albus HOM05D005245 ORTHO05D006388 1.2e-89 335.5 656 34.1
TPR.G14943 Trifolium pratense HOM05D005245 ORTHO05D006388 1.2e-89 335.5 693 33.6
MD09G1139300 Malus domestica HOM05D005245 ORTHO05D006388 2.1e-89 334.7 699 32.6
MBI06_g25721_MAGBIO Magnolia biondii HOM05D005245 ORTHO05D006388 6.2e-89 333.2 642 33.2
FvH4_6g27000 Fragaria vesca HOM05D005245 ORTHO05D006388 3.1e-88 330.9 744 32.0
Lj3g0023683 Lotus japonicus HOM05D005245 ORTHO05D006388 3.1e-88 330.9 716 32.4
Sed0004663 Sechium edule HOM05D005245 ORTHO05D006388 8.9e-88 329.3 714 36.0
FAN09G0613 Fragaria x ananassa HOM05D005245 ORTHO05D006388 1.5e-87 328.6 756 31.9
Lalb_Chr03g0029811 Lupinus albus HOM05D005245 ORTHO05D006388 4.4e-87 327.0 668 33.7
Phvul.011G116900 Phaseolus vulgaris HOM05D005245 ORTHO05D006388 7.5e-87 326.2 673 35.1
arahy.Tifrunner.gnm1.ann1.MS8YUN Arachis hypogaea HOM05D005245 ORTHO05D006388 1.3e-86 325.5 676 33.7
AUR62038992 Chenopodium quinoa HOM05D005245 ORTHO05D006388 2.9e-86 324.3 712 34.3
Psat7g166560 Pisum sativum HOM05D005245 ORTHO05D006388 3.7e-86 323.9 708 32.8
CARHR168460 Cardamine hirsuta HOM05D005245 ORTHO05D006388 4.9e-86 323.6 729 32.8
Sp5g04610 Schrenkiella parvula HOM05D005245 ORTHO05D006388 5.4e-85 320.1 659 36.1
arahy.Tifrunner.gnm1.ann1.BT5S0A Arachis hypogaea HOM05D005245 ORTHO05D006388 7.0e-85 319.7 675 33.3
Eucgr.A01888 Eucalyptus grandis HOM05D005245 ORTHO05D006388 9.2e-85 319.3 752 33.1
Ah.01g003870 Amaranthus hybridus HOM05D005245 ORTHO05D006388 1.2e-84 318.9 738 32.0
AUR62024070 Chenopodium quinoa HOM05D005245 ORTHO05D006388 1.2e-84 318.9 725 34.6
RcHm_v2.0_Chr2g0128861 Rosa chinensis HOM05D005245 ORTHO05D006388 1.2e-84 318.9 733 31.9
Hund00957 Selenicereus undatus HOM05D005245 ORTHO05D006388 3.5e-84 317.4 904 29.2
Aqoxy1G02205 Aquilegia oxysepala HOM05D005245 ORTHO05D006388 7.8e-84 316.2 639 33.5
SHI10497 Sapria himalayana HOM05D005245 ORTHO05D006388 5.1e-83 313.5 673 32.5
AL5G39800 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 6.6e-83 313.2 716 32.8
PSO384G4553 Papaver somniferum HOM05D005245 ORTHO05D006388 8.6e-83 312.8 643 33.9
AT3G58110 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 3.3e-82 310.8 828 32.4
Carub.0005s2496 Capsella rubella HOM05D005245 ORTHO05D006388 2.1e-81 308.1 663 36.3
Thhalv10005785m.g Eutrema salsugineum HOM05D005245 ORTHO05D006388 1.8e-80 305.1 665 35.0
PSO339G1987 Papaver somniferum HOM05D005245 ORTHO05D006388 2.3e-80 304.7 747 30.9
Atru.chr6.2836 Acer truncatum HOM05D005245 ORTHO05D006388 6.8e-80 303.1 768 30.2
DCAR_006629 Daucus carota HOM05D005245 ORTHO05D006388 8.9e-80 302.8 707 31.4
ECA233G0823 Erigeron canadensis HOM05D005245 ORTHO05D006388 2.6e-79 301.2 675 31.6
Medtr4g079510 Medicago truncatula HOM05D005245 ORTHO05D006388 2.6e-79 301.2 724 32.0
A07p23880 Brassica napus HOM05D005245 ORTHO05D006388 4.4e-79 300.4 677 33.4
C06p25110 Brassica napus HOM05D005245 ORTHO05D006388 9.9e-79 299.3 688 33.3
BolC6t37670H Brassica oleracea HOM05D005245 ORTHO05D006388 1.7e-78 298.5 688 33.3
HanXRQChr17g0554751 Helianthus annuus HOM05D005245 ORTHO05D006388 1.7e-78 298.5 724 30.1
CARHR137420 Cardamine hirsuta HOM05D005245 ORTHO05D006388 2.9e-78 297.7 649 31.1
BraA07t30041Z Brassica rapa HOM05D005245 ORTHO05D006388 8.3e-78 296.2 636 34.0
CDE10G0023 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 1.1e-77 295.8 660 32.6
RcHm_v2.0_Chr5g0053351 Rosa chinensis HOM05D005245 ORTHO05D006388 1.9e-77 295.0 740 31.2
BcaC08g44897 Brassica carinata HOM05D005245 ORTHO05D006388 2.4e-77 294.7 687 32.3
AT2G42370 Arabidopsis thaliana HOM05D005245 ORTHO05D006388 5.4e-77 293.5 646 32.2
HanXRQChr17g0560461 Helianthus annuus HOM05D005245 ORTHO05D006388 5.4e-77 293.5 633 34.0
AL4G40790 Arabidopsis lyrata HOM05D005245 ORTHO05D006388 6.0e-76 290.0 674 32.3
BcaB02g07551 Brassica carinata HOM05D005245 ORTHO05D006388 3.9e-75 287.3 696 33.3
DCAR_025312 Daucus carota HOM05D005245 ORTHO05D006388 1.5e-74 285.4 966 26.6
FAN21G3056 Fragaria x ananassa HOM05D005245 ORTHO05D006388 1.6e-73 282.0 649 34.4
TAR627G0756 Trochodendron aralioides HOM05D005245 ORTHO05D006388 2.6e-71 274.6 577 31.7
FvH4_3g11260 Fragaria vesca HOM05D005245 ORTHO05D006388 1.1e-69 269.2 737 31.2
Sabra13G0101100 Salix brachista HOM05D005245 ORTHO05D006388 1.0e-67 262.7 534 34.8
PSO782G4194 Papaver somniferum HOM05D005245 ORTHO05D006388 3.9e-67 260.8 872 27.6
PSO063G4059 Papaver somniferum HOM05D005245 ORTHO05D006388 1.1e-66 259.2 886 27.1
HPP92_024035 Vanilla planifolia HOM05D005245 ORTHO05D006388 2.1e-60 238.4 665 29.6
ATR0602G272 Amborella trichopoda HOM05D005245 ORTHO05D006388 1.1e-58 232.6 664 27.6
CDE10G0522 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.1e-57 228.4 744 26.7
Lalb_Chr22g0356801 Lupinus albus HOM05D005245 ORTHO05D006388 1.1e-56 226.1 683 27.8
Glyma.06G284801 Glycine max HOM05D005245 ORTHO05D006388 2.6e-55 221.5 201 53.2
BcaB02g07550 Brassica carinata HOM05D005245 ORTHO05D006388 3.2e-53 214.5 566 30.4
Cc05_g08020 Coffea canephora HOM05D005245 ORTHO05D006388 3.5e-52 211.1 349 41.0
HPP92_005198 Vanilla planifolia HOM05D005245 ORTHO05D006388 4.0e-48 197.6 648 27.0
BcaC08g44896 Brassica carinata HOM05D005245 ORTHO05D006388 4.3e-42 177.6 173 52.6
SGA_v2.0_scaffold51G18645 Striga asiatica HOM05D005245 ORTHO05D006388 3.1e-40 171.4 145 59.3
SGA_v2.0_scaffold51G18646 Striga asiatica HOM05D005245 ORTHO05D006388 4.0e-40 171.0 469 32.6
COL.COLO4_10076 Corchorus olitorius HOM05D005245 ORTHO05D006388 6.5e-38 163.7 286 34.6
COL.COLO4_23697 Corchorus olitorius HOM05D005245 ORTHO05D006388 8.4e-38 163.3 234 35.5
CDE10G0045 Ceratophyllum demersum HOM05D005245 ORTHO05D006388 2.5e-34 151.8 184 44.6
CsaV3_3G019350 Cucumis sativus L. HOM05D005245 ORTHO05D006388 4.3e-34 151.0 257 37.7
MELO3C019743.2 Cucumis melo HOM05D005245 ORTHO05D006388 5.7e-34 150.6 432 31.2
Cc02_g14370 Coffea canephora HOM05D005245 ORTHO05D006388 6.3e-33 147.1 202 37.1
Glyma.12G121100 Glycine max HOM05D005245 ORTHO05D006388 9.0e-32 143.3 136 51.5
SEGI_35055 Sequoiadendron giganteum HOM05D005245 ORTHO05D006388 1.5e-26 125.9 267 30.7
unitig_62.g23335 Utricularia gibba HOM05D005245 ORTHO05D006388 3.7e-25 121.3 201 37.8
Atru.chr3.860 Acer truncatum HOM05D005245 ORTHO05D006388 7.7e-23 113.6 355 30.1
Zm00001eb238770 Zea mays HOM05D005245 ORTHO05D006388 4.7e-20 104.4 182 35.7
Zm00001eb204940 Zea mays HOM05D005245 ORTHO05D006388 3.0e-19 101.7 198 33.3
Os06g0538200 Oryza sativa ssp. japonica HOM05D005245 ORTHO05D006388 4.4e-18 97.8 768 22.7
ECA233G3350 Erigeron canadensis HOM05D005245 ORTHO05D006388 9.7e-18 96.7 194 29.9
Zm00001eb238760 Zea mays HOM05D005245 ORTHO05D006388 9.7e-18 96.7 229 31.0
Sabra13G0101200 Salix brachista HOM05D005245 ORTHO05D006388 2.8e-17 95.1 133 36.8
RcHm_v2.0_Chr4g0423021 Rosa chinensis HOM05D005245 ORTHO05D006388 2.4e-08 65.5 71 46.5
CAN.G97.26 Capsicum annuum HOM05D000252 ORTHO05D006388 5.9e-07 60.8 65 38.5


User provided reference genes

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