Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15312 Utricularia gibba HOM05D007448 ORTHO05D009392 7.3e-40 166.8 85 100.0
Migut.M00875 Erythranthe guttata HOM05D007448 ORTHO05D009392 2.7e-18 95.1 85 60.0
Manes.03G111700 Manihot esculenta HOM05D007448 ORTHO05D009392 1.3e-17 92.8 74 64.9
MD03G1219500 Malus domestica HOM05D007448 ORTHO05D009392 8.7e-17 90.1 73 63.0
Sabra16G0269700 Salix brachista HOM05D007448 ORTHO05D009392 5.7e-16 87.4 66 62.1
CsaV3_3G044380 Cucumis sativus L. HOM05D007448 ORTHO05D009392 2.8e-15 85.1 66 68.2
ClCG11G018440 Citrullus lanatus HOM05D007448 ORTHO05D009392 3.7e-15 84.7 66 66.7
Prupe.4G189600 Prunus persica HOM05D007448 ORTHO05D009392 3.7e-15 84.7 85 54.1
Gohir.D13G148600 Gossypium hirsutum HOM05D007448 ORTHO05D009392 4.8e-15 84.3 67 64.2
Oeu019361.1 Olea europaea HOM05D007448 ORTHO05D009392 4.8e-15 84.3 63 66.7
Potri.001G406200 Populus trichocarpa HOM05D007448 ORTHO05D009392 4.8e-15 84.3 67 61.2
Gohir.A13G143800 Gossypium hirsutum HOM05D007448 ORTHO05D009392 6.3e-15 84.0 66 65.2
Gorai.013G166400 Gossypium raimondii HOM05D007448 ORTHO05D009392 6.3e-15 84.0 67 64.2
Atru.chr4.846 Acer truncatum HOM05D007448 ORTHO05D009392 8.2e-15 83.6 74 56.8
Nn1g03921 Nelumbo nucifera HOM05D007448 ORTHO05D009392 8.2e-15 83.6 67 64.2
Nitab4.5_0000639g0040 Nicotiana tabacum HOM05D007448 ORTHO05D009392 8.2e-15 83.6 74 58.1
Sed0026843 Sechium edule HOM05D007448 ORTHO05D009392 8.2e-15 83.6 68 64.7
Thecc.07G071800 Theobroma cacao HOM05D007448 ORTHO05D009392 8.2e-15 83.6 73 61.6
FAN25G3793 Fragaria x ananassa HOM05D007448 ORTHO05D009392 1.1e-14 83.2 73 58.9
Hma1.2p1_1003F.1_g246780 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.4e-14 82.8 72 61.1
Hma1.2p1_1488F.1_g286625 Hydrangea macrophylla HOM05D007448 ORTHO05D009392 1.4e-14 82.8 72 61.1
PGR083G2019 Punica granatum HOM05D007448 ORTHO05D009392 1.4e-14 82.8 67 62.7
Nitab4.5_0008360g0010 Nicotiana tabacum HOM05D007448 ORTHO05D009392 1.8e-14 82.4 74 56.8
Sopen12g006840 Solanum pennellii HOM05D007448 ORTHO05D009392 1.8e-14 82.4 84 53.6
PGSC0003DMG400008573 Solanum tuberosum HOM05D007448 ORTHO05D009392 1.8e-14 82.4 84 53.6
FvH4_3g20900 Fragaria vesca HOM05D007448 ORTHO05D009392 2.4e-14 82.0 66 63.6
FAN21G3287 Fragaria x ananassa HOM05D007448 ORTHO05D009392 2.4e-14 82.0 66 63.6
Solyc12g013500.2 Solanum lycopersicum HOM05D007448 ORTHO05D009392 3.1e-14 81.6 84 52.4
Sc03g0009610 Simmondsia chinensis HOM05D007448 ORTHO05D009392 4.1e-14 81.3 74 56.8
Thhalv10021866m.g Eutrema salsugineum HOM05D007448 ORTHO05D009392 5.3e-14 80.9 73 57.5
RcHm_v2.0_Chr5g0035321 Rosa chinensis HOM05D007448 ORTHO05D009392 5.3e-14 80.9 68 60.3
CiPaw.11G176100 Carya illinoinensis HOM05D007448 ORTHO05D009392 9.0e-14 80.1 65 67.7
Ciclev10010083m.g Citrus clementina HOM05D007448 ORTHO05D009392 9.0e-14 80.1 78 55.1
Duzib213G0053 Durio zibethinus HOM05D007448 ORTHO05D009392 9.0e-14 80.1 65 66.2
Sp3g23710 Schrenkiella parvula HOM05D007448 ORTHO05D009392 9.0e-14 80.1 73 56.2
Ciclev10010683m.g Citrus clementina HOM05D007448 ORTHO05D009392 1.5e-13 79.3 76 55.3
Peaxi162Scf00000g00504 Petunia axillaris HOM05D007448 ORTHO05D009392 1.5e-13 79.3 64 64.1
MELO3C018199.2 Cucumis melo HOM05D003028 ORTHO05D003465 2.6e-13 78.6 60 68.3
HanXRQChr08g0234641 Helianthus annuus HOM05D007448 ORTHO05D009392 2.6e-13 78.6 70 55.7
GSVIVG01014426001 Vitis vinifera HOM05D007448 ORTHO05D009392 2.6e-13 78.6 72 56.9
Cpa.g.sc80.111 Carica papaya HOM05D007448 ORTHO05D009392 3.4e-13 78.2 67 59.7
TWI39G0054 Tripterygium wilfordii HOM05D007448 ORTHO05D009392 3.4e-13 78.2 72 55.6
BcaC06g35910 Brassica carinata HOM05D007448 ORTHO05D009392 4.5e-13 77.8 67 59.7
BolC7t41418H Brassica oleracea HOM05D007448 ORTHO05D009392 4.5e-13 77.8 67 59.7
BcaB06g26831 Brassica carinata HOM05D007448 ORTHO05D009392 5.9e-13 77.4 67 59.7
A07p06520 Brassica napus HOM05D007448 ORTHO05D009392 5.9e-13 77.4 67 59.7
BraA07t28447Z Brassica rapa HOM05D007448 ORTHO05D009392 5.9e-13 77.4 67 59.7
Carub.0003s1319 Capsella rubella HOM05D007448 ORTHO05D009392 5.9e-13 77.4 73 56.2
Cfa020508 Carpinus fangiana HOM05D007448 ORTHO05D009392 5.9e-13 77.4 64 62.5
AUR62015605 Chenopodium quinoa HOM05D007448 ORTHO05D009392 5.9e-13 77.4 68 54.4
SalBow8G2366 Salvia bowleyana HOM05D007448 ORTHO05D009392 7.7e-13 77.0 61 63.9
Cc06_g05250 Coffea canephora HOM05D007448 ORTHO05D009392 1.0e-12 76.6 71 56.3
AL3G25660 Arabidopsis lyrata HOM05D007448 ORTHO05D009392 2.2e-12 75.5 73 54.8
AT3G13677 Arabidopsis thaliana HOM05D007448 ORTHO05D009392 2.2e-12 75.5 73 54.8
Eucgr.F01082 Eucalyptus grandis HOM05D007448 ORTHO05D009392 2.2e-12 75.5 66 57.6
Lsat_1_v5_gn_5_6900 Lactuca sativa HOM05D007448 ORTHO05D009392 2.2e-12 75.5 65 58.5
Aa31LG8G850 Aethionema arabicum HOM05D007448 ORTHO05D009392 2.9e-12 75.1 70 55.7
CDE02G3786 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 3.8e-12 74.7 66 57.6
ECA246G0067 Erigeron canadensis HOM05D007448 ORTHO05D009392 5.0e-12 74.3 67 58.2
THA.LOC104822630 Tarenaya hassleriana HOM05D007448 ORTHO05D009392 6.5e-12 73.9 67 58.2
DCAR_021403 Daucus carota HOM05D007448 ORTHO05D009392 8.5e-12 73.6 66 59.1
Gorai.007G085800 Gossypium raimondii HOM05D007448 ORTHO05D009392 2.5e-11 72.0 67 56.7
Rhsim04G0017500 Rhododendron simsii HOM05D007448 ORTHO05D009392 2.5e-11 72.0 79 50.6
Glyma.06G253900 Glycine max HOM05D007448 ORTHO05D009392 7.2e-11 70.5 65 55.4
Phvul.011G154800 Phaseolus vulgaris HOM05D007448 ORTHO05D009392 7.2e-11 70.5 85 48.2
vmacro09556 Vaccinium macrocarpon HOM05D007448 ORTHO05D009392 1.2e-10 69.7 79 49.4
PSO421G0428 Papaver somniferum HOM05D007448 ORTHO05D009392 1.6e-10 69.3 58 60.3
Oeu006763.2 Olea europaea HOM05D007448 ORTHO05D009392 2.1e-10 68.9 66 57.6
CDE05G1526 Ceratophyllum demersum HOM05D007448 ORTHO05D009392 2.7e-10 68.6 66 54.5
Medtr7g057740 Medicago truncatula HOM05D007448 ORTHO05D009392 2.7e-10 68.6 58 56.9
CANSAT11G1525 Cannabis sativa HOM05D007448 ORTHO05D009392 3.6e-10 68.2 58 60.3
TPR.G23252 Trifolium pratense HOM05D007448 ORTHO05D009392 3.6e-10 68.2 58 58.6
arahy.Tifrunner.gnm1.ann1.UX5IA9 Arachis hypogaea HOM05D007448 ORTHO05D009392 1.0e-09 66.6 58 58.6
Psat3g145520 Pisum sativum HOM05D007448 ORTHO05D009392 1.4e-09 66.2 58 58.6
Lj3g0013278 Lotus japonicus HOM05D007448 ORTHO05D009392 1.8e-09 65.9 58 60.3
Os03g0581650 Oryza sativa ssp. japonica HOM05D007448 ORTHO05D009392 1.8e-09 65.9 80 50.0
Actinidia18748 Actinidia chinensis HOM05D007448 ORTHO05D009392 2.3e-09 65.5 55 61.8
Gohir.A11G075500 Gossypium hirsutum HOM05D007448 ORTHO05D009392 2.3e-09 65.5 65 56.9
arahy.Tifrunner.gnm1.ann1.GZ4R1Y Arachis hypogaea HOM05D007448 ORTHO05D009392 3.9e-09 64.7 59 54.2
MSTRG.14378 Avicennia marina HOM05D007448 ORTHO05D009392 2.5e-08 62.0 66 48.5
QL08p018291 Quercus lobata HOM05D007448 ORTHO05D009392 4.3e-08 61.2 68 47.1
Aqoxy4G01379 Aquilegia oxysepala HOM05D007448 ORTHO05D009392 5.7e-08 60.8 68 51.5
AUR62035371 Chenopodium quinoa HOM05D007448 ORTHO05D009392 5.7e-08 60.8 76 43.4
Zm00001eb049080 Zea mays HOM05D007448 ORTHO05D009392 9.7e-08 60.1 59 52.5
C07p09790 Brassica napus HOM05D004899 ORTHO05D006580 1.3e-07 59.7 56 50.0
EL10Ac4g09050 Beta vulgaris HOM05D007448 ORTHO05D009392 2.8e-07 58.5 56 53.6
AUR62029317 Chenopodium quinoa HOM05D007448 ORTHO05D009392 2.8e-07 58.5 79 43.0
Ah.06g183620 Amaranthus hybridus HOM05D007448 ORTHO05D009392 3.7e-07 58.2 57 50.9
AUR62035373 Chenopodium quinoa HOM05D007448 ORTHO05D009392 6.3e-07 57.4 58 46.6
TAR626G0388 Trochodendron aralioides HOM05D007448 ORTHO05D009392 6.3e-07 57.4 54 51.9
CSS0027029 Camellia sinensis var. sinensis HOM05D007448 ORTHO05D009392 8.2e-07 57.0 47 59.6
FAN11G2341 Fragaria x ananassa HOM05D007448 ORTHO05D009392 1.8e-06 55.8 47 57.4
Mapoly0162s0010 Marchantia polymorpha HOM05D007448 ORTHO05D009392 2.4e-06 55.5 74 44.6
CAN.G1320.10 Capsicum annuum HOM05D007448 ORTHO05D009392 6.9e-06 53.9 56 48.2
Hund02207 Selenicereus undatus HOM05D007448 ORTHO05D009392 9.1e-06 53.5 55 45.5


User provided reference genes

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