Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15196 Utricularia gibba HOM05D005267 ORTHO05D006303 1.4e-133 479.6 236 100.0
SGA_v2.0_scaffold41G15783 Striga asiatica HOM05D005267 ORTHO05D006303 8.4e-94 347.4 215 75.8
Migut.L01860 Erythranthe guttata HOM05D005267 ORTHO05D006303 1.4e-93 346.7 232 72.4
Actinidia37788 Actinidia chinensis HOM05D005267 ORTHO05D006303 1.7e-86 323.2 216 71.8
Oeu063094.3 Olea europaea HOM05D005267 ORTHO05D006303 2.2e-86 322.8 208 72.6
Nitab4.5_0006454g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 1.9e-85 319.7 225 68.4
Nitab4.5_0008653g0020 Nicotiana tabacum HOM05D005267 ORTHO05D006303 7.1e-85 317.8 225 68.4
Cpa.g.sc85.6 Carica papaya HOM05D005267 ORTHO05D006303 2.7e-84 315.8 221 69.2
Ciclev10012610m.g Citrus clementina HOM05D005267 ORTHO05D006303 1.3e-83 313.5 233 65.2
Cc06_g07120 Coffea canephora HOM05D005267 ORTHO05D006303 1.3e-83 313.5 233 66.5
CSS0044429 Camellia sinensis var. sinensis HOM05D005267 ORTHO05D006303 8.7e-83 310.8 215 67.4
Atru.chr8.1242 Acer truncatum HOM05D005267 ORTHO05D006303 4.3e-82 308.5 224 67.9
ClCG01G015080 Citrullus lanatus HOM05D005267 ORTHO05D006303 5.7e-82 308.1 223 66.8
PGSC0003DMG400028129 Solanum tuberosum HOM05D005267 ORTHO05D006303 5.7e-82 308.1 216 68.1
ECA248G0309 Erigeron canadensis HOM05D005267 ORTHO05D006303 9.7e-82 307.4 230 64.8
Medtr1g054315 Medicago truncatula HOM05D005267 ORTHO05D006303 9.7e-82 307.4 221 66.1
MELO3C024594.2 Cucumis melo HOM05D005267 ORTHO05D006303 3.7e-81 305.4 223 66.8
Solyc10g081590.2 Solanum lycopersicum HOM05D005267 ORTHO05D006303 3.7e-81 305.4 216 67.1
Lsat_1_v5_gn_1_56341 Lactuca sativa HOM05D005267 ORTHO05D006303 4.8e-81 305.1 221 68.3
CsaV3_6G041190 Cucumis sativus L. HOM05D005267 ORTHO05D006303 1.1e-80 303.9 223 66.4
Sopen10g032100 Solanum pennellii HOM05D005267 ORTHO05D006303 2.4e-80 302.8 216 66.7
QL07p025833 Quercus lobata HOM05D005267 ORTHO05D006303 3.1e-80 302.4 226 65.5
Cfa020104 Carpinus fangiana HOM05D005267 ORTHO05D006303 1.2e-79 300.4 230 65.2
PGR142G1416 Punica granatum HOM05D005267 ORTHO05D006303 1.5e-79 300.1 236 65.7
Rhsim03G0057300 Rhododendron simsii HOM05D005267 ORTHO05D006303 2.0e-79 299.7 222 64.9
TAR623G0682 Trochodendron aralioides HOM05D005267 ORTHO05D006303 2.0e-79 299.7 210 70.0
arahy.Tifrunner.gnm1.ann1.3RXG3F Arachis hypogaea HOM05D005267 ORTHO05D006303 2.6e-79 299.3 225 65.3
CANSAT64G2985 Cannabis sativa HOM05D005267 ORTHO05D006303 2.6e-79 299.3 241 63.9
Ca_18103_v3 Cicer arietinum L. HOM05D005267 ORTHO05D006303 2.6e-79 299.3 220 65.0
DCAR_013470 Daucus carota HOM05D006729 ORTHO05D008502 3.4e-79 298.9 212 68.4
TWI77G0597 Tripterygium wilfordii HOM05D005267 ORTHO05D006303 4.5e-79 298.5 225 65.3
Lj5g0006264 Lotus japonicus HOM05D005267 ORTHO05D006303 1.0e-78 297.4 217 66.8
arahy.Tifrunner.gnm1.ann1.H25EQ1 Arachis hypogaea HOM05D005267 ORTHO05D006303 1.7e-78 296.6 225 64.4
Haze_20086 Corylus avellana HOM05D005267 ORTHO05D006303 1.7e-78 296.6 229 64.6
Glyma.09G103300 Glycine max HOM05D005267 ORTHO05D006303 2.9e-78 295.8 230 63.0
HanXRQChr01g0026301 Helianthus annuus HOM05D005267 ORTHO05D006303 2.9e-78 295.8 216 66.7
Psat6g110480 Pisum sativum HOM05D005267 ORTHO05D006303 2.9e-78 295.8 214 65.9
Duzib128G1921 Durio zibethinus HOM05D005267 ORTHO05D006303 6.5e-78 294.7 242 60.7
CiPaw.10G022300 Carya illinoinensis HOM05D005267 ORTHO05D006303 8.5e-78 294.3 217 65.9
Lalb_Chr02g0153991 Lupinus albus HOM05D005267 ORTHO05D006303 1.4e-77 293.5 229 64.2
FAN05G1850 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.9e-77 293.1 229 62.4
COL.COLO4_29458 Corchorus olitorius HOM05D005267 ORTHO05D006303 3.2e-77 292.4 240 62.5
FvH4_6g21270 Fragaria vesca HOM05D005267 ORTHO05D006303 3.2e-77 292.4 233 60.9
MBI05_g37655_MAGBIO Magnolia biondii HOM05D005267 ORTHO05D006303 3.2e-77 292.4 243 60.9
FAN14G1206 Fragaria x ananassa HOM05D005267 ORTHO05D006303 7.2e-77 291.2 233 60.5
Glyma.02G167800 Glycine max HOM05D005267 ORTHO05D006303 7.2e-77 291.2 230 63.5
Nn6g32442 Nelumbo nucifera HOM05D005267 ORTHO05D006303 7.2e-77 291.2 217 66.4
Thecc.05G181400 Theobroma cacao HOM05D005267 ORTHO05D006303 7.2e-77 291.2 240 62.1
FAN02G1071 Fragaria x ananassa HOM05D005267 ORTHO05D006303 1.2e-76 290.4 229 61.1
Sed0012434 Sechium edule HOM05D005267 ORTHO05D006303 1.2e-76 290.4 214 66.8
TPR.G30771 Trifolium pratense HOM05D005267 ORTHO05D006303 1.2e-76 290.4 217 64.1
THA.LOC104821240 Tarenaya hassleriana HOM05D005267 ORTHO05D006303 2.1e-76 289.7 237 62.0
RcHm_v2.0_Chr3g0477741 Rosa chinensis HOM05D005267 ORTHO05D006303 4.6e-76 288.5 226 61.9
RcHm_v2.0_Chr3g0477781 Rosa chinensis HOM05D005267 ORTHO05D006303 4.6e-76 288.5 226 61.9
Eucgr.A02521 Eucalyptus grandis HOM05D005267 ORTHO05D006303 1.4e-75 287.0 215 65.6
Lalb_Chr21g0316191 Lupinus albus HOM05D005267 ORTHO05D006303 2.3e-75 286.2 229 62.0
GSVIVG01022470001 Vitis vinifera HOM05D005267 ORTHO05D006303 2.3e-75 286.2 204 67.2
MD14G1048200 Malus domestica HOM05D005267 ORTHO05D006303 3.9e-75 285.4 233 62.2
Phvul.007G264300 Phaseolus vulgaris HOM05D005267 ORTHO05D006303 5.1e-75 285.0 235 60.9
Aqoxy1G00565 Aquilegia oxysepala HOM05D005267 ORTHO05D006303 6.7e-75 284.6 216 63.9
PSO384G1433 Papaver somniferum HOM05D005267 ORTHO05D006303 6.7e-75 284.6 213 65.7
Prupe.7G087000 Prunus persica HOM05D005267 ORTHO05D006303 1.5e-74 283.5 217 64.1
FAN05G5707 Fragaria x ananassa HOM05D005267 ORTHO05D006303 2.0e-74 283.1 243 58.4
Aa31LG10G13030 Aethionema arabicum HOM05D006729 ORTHO05D008502 2.5e-74 282.7 239 61.1
Thhalv10006199m.g Eutrema salsugineum HOM05D005267 ORTHO05D006303 4.3e-74 282.0 231 61.9
Carub.0005s2521 Capsella rubella HOM05D005267 ORTHO05D006303 7.4e-74 281.2 224 63.4
AT3G58470 Arabidopsis thaliana HOM05D005267 ORTHO05D006303 9.7e-74 280.8 231 61.5
VMungo0720G2658 Vigna mungo HOM05D005267 ORTHO05D006303 9.7e-74 280.8 235 60.0
Potri.016G063600 Populus trichocarpa HOM05D005267 ORTHO05D006303 1.7e-73 280.0 217 66.4
Eucgr.A02526 Eucalyptus grandis HOM05D005267 ORTHO05D006303 2.2e-73 279.6 210 65.2
BraA09t40549Z Brassica rapa HOM05D005267 ORTHO05D006303 8.2e-73 277.7 238 60.5
Sabra16G0066000 Salix brachista HOM05D005267 ORTHO05D006303 8.2e-73 277.7 226 62.8
CARHR168860 Cardamine hirsuta HOM05D005267 ORTHO05D006303 2.4e-72 276.2 231 60.6
BcaC07g40256 Brassica carinata HOM05D005267 ORTHO05D006303 3.1e-72 275.8 220 62.7
BcaC07g40203 Brassica carinata HOM05D005267 ORTHO05D006303 5.3e-72 275.0 228 61.8
AL5G40230 Arabidopsis lyrata HOM05D005267 ORTHO05D006303 6.9e-72 274.6 231 60.2
Sp5g04410 Schrenkiella parvula HOM05D005267 ORTHO05D006303 9.1e-72 274.2 223 62.8
Zm00001eb057270 Zea mays HOM05D005267 ORTHO05D006303 2.0e-71 273.1 243 57.2
Lj1A1066G52 Lonicera japonica HOM05D005267 ORTHO05D006303 5.9e-71 271.6 227 62.1
C08p33850 Brassica napus HOM05D006729 ORTHO05D008502 1.1e-69 267.3 227 59.9
BolC8t50983H Brassica oleracea HOM05D006729 ORTHO05D008502 1.1e-69 267.3 227 59.9
Hund15032 Selenicereus undatus HOM05D005267 ORTHO05D006303 1.9e-69 266.5 232 57.8
A09p51030 Brassica napus HOM05D006729 ORTHO05D008502 5.5e-69 265.0 237 58.6
Os03g0749900 Oryza sativa ssp. japonica HOM05D005267 ORTHO05D006303 7.2e-69 264.6 219 59.8
AUR62036286 Chenopodium quinoa HOM05D005267 ORTHO05D006303 2.1e-68 263.1 229 56.3
AUR62039735 Chenopodium quinoa HOM05D005267 ORTHO05D006303 3.0e-67 259.2 247 53.4
CDE05G1441 Ceratophyllum demersum HOM05D005267 ORTHO05D006303 3.9e-67 258.8 220 59.5
EL10Ac5g11779 Beta vulgaris HOM05D005267 ORTHO05D006303 2.8e-65 252.7 225 53.8
ATR0697G123 Amborella trichopoda HOM05D006729 ORTHO05D008502 6.3e-65 251.5 213 60.6
Peaxi162Scf00060g01112 Petunia axillaris HOM05D005267 ORTHO05D006303 4.1e-64 248.8 219 58.0
Gorai.006G146100 Gossypium raimondii HOM05D005267 ORTHO05D006303 5.0e-62 241.9 245 54.7
Dinv11912 Davidia involucrata HOM05D005267 ORTHO05D006303 1.4e-59 233.8 202 60.4
Pp3c20_23410 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.8e-59 233.4 237 49.4
Gohir.A09G131300 Gossypium hirsutum HOM05D005267 ORTHO05D006303 3.0e-59 232.6 229 55.9
Mapoly0207s0006 Marchantia polymorpha HOM05D005267 ORTHO05D006303 3.7e-57 225.7 222 50.0
Sc01g0005180 Simmondsia chinensis HOM05D005267 ORTHO05D006303 3.4e-50 202.6 184 59.2
CAN.G128.157 Capsicum annuum HOM05D005267 ORTHO05D006303 3.1e-48 196.1 128 66.4
vmacro07530 Vaccinium macrocarpon HOM05D005267 ORTHO05D006303 1.6e-47 193.7 128 68.8
Zm00001eb155770 Zea mays HOM05D000737 ORTHO05D006303 4.5e-47 192.2 198 52.0
Hund24301 Selenicereus undatus HOM05D005267 ORTHO05D006303 5.9e-47 191.8 124 69.4
Hund24299 Selenicereus undatus HOM05D005267 ORTHO05D006303 1.3e-46 190.7 124 68.5
BcaC07g40255 Brassica carinata HOM05D005267 ORTHO05D006303 8.5e-46 188.0 187 55.1
Gohir.D09G127600 Gossypium hirsutum HOM05D005267 ORTHO05D006303 5.5e-45 185.3 155 61.9
Rhsim03G0057000 Rhododendron simsii HOM05D005267 ORTHO05D006303 1.6e-44 183.7 148 60.8
Gohir.D09G127100 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.1e-44 183.3 154 61.7
Zm00001eb307210 Zea mays HOM05D005267 ORTHO05D006303 3.6e-44 182.6 176 54.5
Manes.08G038900 Manihot esculenta HOM05D005267 ORTHO05D006303 3.0e-43 179.5 148 62.2
CBR_g551 Chara braunii HOM05D005267 ORTHO05D006303 1.0e-38 164.5 253 36.4
BolC4t23005H Brassica oleracea HOM05D005267 ORTHO05D006303 6.8e-35 151.8 134 56.7
Zm00001eb020160 Zea mays HOM05D005267 ORTHO05D006303 8.9e-35 151.4 104 63.5
SEGI_05913 Sequoiadendron giganteum HOM05D005267 ORTHO05D006303 4.9e-33 145.6 147 51.0
arahy.Tifrunner.gnm1.ann1.TFGA9S Arachis hypogaea HOM05D005267 ORTHO05D006303 5.4e-32 142.1 108 61.1
AagrBONN_evm.TU.Sc2ySwM_344.4688 Anthoceros agrestis HOM05D005267 ORTHO05D006303 7.0e-32 141.7 146 48.6
MSTRG.10424 Avicennia marina HOM05D005267 ORTHO05D006303 1.1e-29 134.4 93 69.9
Zm00001eb298070 Zea mays HOM05D005267 ORTHO05D006303 1.9e-29 133.7 135 51.9
C04p14160 Brassica napus HOM05D005267 ORTHO05D006303 1.2e-28 131.0 117 56.4
Gorai.011G111300 Gossypium raimondii HOM05D005267 ORTHO05D006303 8.9e-27 124.8 75 74.7
Gohir.D03G023232 Gossypium hirsutum HOM05D005267 ORTHO05D006303 7.5e-26 121.7 75 74.7
Gorai.001G205400 Gossypium raimondii HOM05D005267 ORTHO05D006303 9.8e-26 121.3 75 70.7
Gorai.013G089700 Gossypium raimondii HOM05D005267 ORTHO05D006303 9.8e-26 121.3 75 72.0
Gohir.A01G123000 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.3e-25 120.9 75 73.3
Gohir.A06G056200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.3e-25 120.9 75 73.3
Gohir.D12G044850 Gossypium hirsutum HOM05D005267 ORTHO05D006303 1.3e-25 120.9 74 74.3
Gohir.D08G106200 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.2e-25 120.2 74 74.3
Gohir.D11G259301 Gossypium hirsutum HOM05D005267 ORTHO05D006303 2.2e-25 120.2 74 74.3
Zm00001eb096050 Zea mays HOM05D005267 ORTHO05D006303 1.0e-22 111.3 123 52.0
Rhsim03G0056100 Rhododendron simsii HOM05D000045 ORTHO05D006303 2.5e-21 106.7 97 57.7
Zm00001eb334640 Zea mays HOM05D005267 ORTHO05D006303 5.2e-19 99.0 67 64.2
HPP92_004175 Vanilla planifolia HOM05D002029 ORTHO05D002158 2.0e-18 97.1 107 51.4
arahy.Tifrunner.gnm1.ann1.74GVQ2 Arachis hypogaea HOM05D005267 ORTHO05D006303 4.9e-17 92.4 66 63.6
A04p02570 Brassica napus HOM05D005267 ORTHO05D006303 2.4e-16 90.1 91 51.6
BcaB02g08262 Brassica carinata HOM05D005267 ORTHO05D006303 7.1e-16 88.6 88 48.9
Cfa022098 Carpinus fangiana HOM05D005267 ORTHO05D125748 2.3e-14 83.6 165 32.1
Gohir.D06G067600 Gossypium hirsutum HOM05D003508 ORTHO05D006303 6.6e-14 82.0 75 57.3
ClCG03G011770 Citrullus lanatus HOM05D000002 ORTHO05D015610 1.9e-13 80.5 55 65.5
Gohir.D06G044601 Gossypium hirsutum HOM05D003508 ORTHO05D006303 2.1e-12 77.0 45 75.6
Gorai.011G067100 Gossypium raimondii HOM05D005267 ORTHO05D006303 2.1e-12 77.0 47 72.3
MCO14G360 Micromonas commoda HOM05D005267 ORTHO05D006303 2.1e-12 77.0 194 28.9
arahy.Tifrunner.gnm1.ann1.HYSL0N Arachis hypogaea HOM05D005267 ORTHO05D006303 2.3e-11 73.6 58 55.2
arahy.Tifrunner.gnm1.ann1.PYJ9JQ Arachis hypogaea HOM05D005267 ORTHO05D006303 5.2e-11 72.4 64 53.1
Cre10.g418700 Chlamydomonas reinhardtii HOM05D005267 ORTHO05D006303 6.8e-11 72.0 144 31.2
Glyma.03G214201 Glycine max HOM05D005267 ORTHO05D006303 1.3e-09 67.8 77 46.8
BolC9t56010H Brassica oleracea HOM05D008384 ORTHO05D042359 3.7e-09 66.2 38 78.9
Mapoly0004s0240 Marchantia polymorpha HOM05D005267 ORTHO05D006303 3.7e-09 66.2 153 28.1
VMungo0464G2161 Vigna mungo HOM05D005267 ORTHO05D006303 4.9e-09 65.9 155 27.7
CBR_g49867 Chara braunii HOM05D000019 ORTHO05D000353 5.4e-08 62.4 166 25.9
Pp3c8_10880 Physcomitrium patens HOM05D005267 ORTHO05D006303 1.3e-06 57.8 209 23.0
AagrBONN_evm.TU.Sc2ySwM_362.204 Anthoceros agrestis HOM05D005267 ORTHO05D006303 1.7e-06 57.4 130 30.0
arahy.Tifrunner.gnm1.ann1.4NE9EM Arachis hypogaea HOM05D005267 ORTHO05D006303 3.0e-06 56.6 50 54.0


User provided reference genes

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