Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15181 Utricularia gibba HOM05D005951 ORTHO05D007025 4.0e-125 451.4 229 100.0
GSVIVG01015014001 Vitis vinifera HOM05D005951 ORTHO05D007025 5.7e-95 351.3 230 73.5
Potri.006G136500 Populus trichocarpa HOM05D005951 ORTHO05D007025 7.4e-95 350.9 228 74.1
Dinv25506 Davidia involucrata HOM05D005951 ORTHO05D007025 2.2e-94 349.4 227 74.9
Gorai.009G038100 Gossypium raimondii HOM05D005951 ORTHO05D007025 2.8e-94 349.0 226 74.3
Migut.J00881 Erythranthe guttata HOM05D005951 ORTHO05D007025 3.7e-94 348.6 229 76.0
MSTRG.26500 Avicennia marina HOM05D005951 ORTHO05D007025 4.8e-94 348.2 230 74.8
CSS0032580 Camellia sinensis var. sinensis HOM05D005951 ORTHO05D007025 4.8e-94 348.2 230 72.2
CiPaw.04G140200 Carya illinoinensis HOM05D005951 ORTHO05D007025 6.3e-94 347.8 230 71.7
Oeu041808.1 Olea europaea HOM05D005951 ORTHO05D007025 8.2e-94 347.4 229 76.4
MD02G1102200 Malus domestica HOM05D005951 ORTHO05D007025 1.8e-93 346.3 227 74.9
RcHm_v2.0_Chr2g0095941 Rosa chinensis HOM05D005951 ORTHO05D007025 1.8e-93 346.3 226 74.3
Cpa.g.sc82.63 Carica papaya HOM05D005951 ORTHO05D007025 2.4e-93 345.9 228 73.2
CsaV3_1G041410 Cucumis sativus L. HOM05D005951 ORTHO05D007025 4.1e-93 345.1 229 72.9
FvH4_1g09390 Fragaria vesca HOM05D005951 ORTHO05D007025 5.3e-93 344.7 224 75.4
FAN19G2090 Fragaria x ananassa HOM05D005951 ORTHO05D007025 5.3e-93 344.7 224 75.4
SGA_v2.0_scaffold55G19875 Striga asiatica HOM05D005951 ORTHO05D007025 5.3e-93 344.7 228 75.0
FAN28G0037 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.9e-93 344.4 224 75.0
FAN28G0822 Fragaria x ananassa HOM05D005951 ORTHO05D007025 6.9e-93 344.4 224 75.0
Gohir.D05G037600 Gossypium hirsutum HOM05D005951 ORTHO05D007025 6.9e-93 344.4 226 73.9
TAR383G1060 Trochodendron aralioides HOM05D005951 ORTHO05D007025 6.9e-93 344.4 225 73.8
Duzib168G0975 Durio zibethinus HOM05D005951 ORTHO05D007025 9.0e-93 344.0 226 73.0
CiPaw.03G200400 Carya illinoinensis HOM05D005951 ORTHO05D007025 1.5e-92 343.2 230 71.7
FAN26G0600 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-92 343.2 224 75.0
FAN26G2189 Fragaria x ananassa HOM05D005951 ORTHO05D007025 1.5e-92 343.2 224 74.6
QL11p002956 Quercus lobata HOM05D005951 ORTHO05D007025 1.5e-92 343.2 225 73.8
Aqoxy7G04154 Aquilegia oxysepala HOM05D005951 ORTHO05D007025 2.0e-92 342.8 225 74.2
Thecc.09G070300 Theobroma cacao HOM05D005951 ORTHO05D007025 2.0e-92 342.8 220 75.0
Nitab4.5_0000170g0090 Nicotiana tabacum HOM05D005951 ORTHO05D007025 2.6e-92 342.4 225 73.3
Gohir.A05G036100 Gossypium hirsutum HOM05D005951 ORTHO05D007025 4.5e-92 341.7 234 71.8
Sabra06G0106700 Salix brachista HOM05D005951 ORTHO05D007025 4.5e-92 341.7 227 71.8
Atru.chr7.1767 Acer truncatum HOM05D005951 ORTHO05D007025 5.9e-92 341.3 227 74.0
ClCG03G014750 Citrullus lanatus HOM05D005951 ORTHO05D007025 7.7e-92 340.9 230 72.6
Glyma.17G045500 Glycine max HOM05D005951 ORTHO05D007025 7.7e-92 340.9 230 71.3
Sed0006808 Sechium edule HOM05D005951 ORTHO05D007025 7.7e-92 340.9 230 72.2
Actinidia39617 Actinidia chinensis HOM05D005951 ORTHO05D007025 1.0e-91 340.5 230 71.3
AL7G18300 Arabidopsis lyrata HOM05D005951 ORTHO05D007025 1.0e-91 340.5 226 73.9
Potri.018G063600 Populus trichocarpa HOM05D005951 ORTHO05D007025 1.0e-91 340.5 227 72.2
BraA01t00476Z Brassica rapa HOM05D000526 ORTHO05D007025 1.3e-91 340.1 229 75.1
Sp7g31000 Schrenkiella parvula HOM05D005951 ORTHO05D007025 1.7e-91 339.7 226 74.3
Eucgr.C03197 Eucalyptus grandis HOM05D005951 ORTHO05D007025 2.2e-91 339.3 220 75.0
Eucgr.L02230 Eucalyptus grandis HOM05D005951 ORTHO05D007025 2.2e-91 339.3 220 75.0
arahy.Tifrunner.gnm1.ann1.7AU96Q Arachis hypogaea HOM05D005951 ORTHO05D007025 2.9e-91 339.0 227 73.1
MD15G1223700 Malus domestica HOM05D005951 ORTHO05D007025 3.8e-91 338.6 217 75.6
arahy.Tifrunner.gnm1.ann1.JRQ3DB Arachis hypogaea HOM05D005951 ORTHO05D007025 5.0e-91 338.2 229 72.5
Ciclev10009369m.g Citrus clementina HOM05D005951 ORTHO05D007025 5.0e-91 338.2 229 69.9
Duzib150G0422 Durio zibethinus HOM05D005951 ORTHO05D007025 5.0e-91 338.2 227 71.8
BcaC09g52137 Brassica carinata HOM05D005951 ORTHO05D007025 6.5e-91 337.8 229 74.7
C01p05390 Brassica napus HOM05D000526 ORTHO05D000956 6.5e-91 337.8 229 74.7
EL10Ac8g18966 Beta vulgaris HOM05D005951 ORTHO05D007025 8.5e-91 337.4 226 73.5
BcaC01g01000 Brassica carinata HOM05D005951 ORTHO05D007025 8.5e-91 337.4 229 73.4
BolC3t20971H Brassica oleracea HOM05D005951 ORTHO05D007025 8.5e-91 337.4 229 73.4
Lj4g0000458 Lotus japonicus HOM05D005951 ORTHO05D007025 8.5e-91 337.4 230 70.9
Manes.16G090500 Manihot esculenta HOM05D005951 ORTHO05D007025 1.1e-90 337.0 220 74.5
BolC1t00519H Brassica oleracea HOM05D000526 ORTHO05D007025 1.4e-90 336.7 229 74.2
Lsat_1_v5_gn_5_138841 Lactuca sativa HOM05D005951 ORTHO05D007025 1.4e-90 336.7 226 71.7
VMungo1215G3086 Vigna mungo HOM05D005951 ORTHO05D007025 1.4e-90 336.7 230 71.3
Manes.03G044600 Manihot esculenta HOM05D005951 ORTHO05D007025 2.5e-90 335.9 225 71.1
Nn6g35632 Nelumbo nucifera HOM05D005951 ORTHO05D007025 2.5e-90 335.9 225 72.4
Cc06_g12700 Coffea canephora HOM05D005951 ORTHO05D007025 3.2e-90 335.5 220 74.1
Prupe.7G192100 Prunus persica HOM05D005951 ORTHO05D007025 3.2e-90 335.5 227 71.4
Sed0027227 Sechium edule HOM05D005951 ORTHO05D007025 3.2e-90 335.5 230 70.9
PGSC0003DMG400013572 Solanum tuberosum HOM05D005951 ORTHO05D007025 3.2e-90 335.5 225 71.1
BcaB03g12809 Brassica carinata HOM05D005951 ORTHO05D007025 5.5e-90 334.7 226 71.7
AUR62028321 Chenopodium quinoa HOM05D005951 ORTHO05D007025 5.5e-90 334.7 220 73.6
FAN23G1113 Fragaria x ananassa HOM05D005951 ORTHO05D007025 7.2e-90 334.3 228 72.8
THA.LOC104803783 Tarenaya hassleriana HOM05D005951 ORTHO05D007025 7.2e-90 334.3 226 74.8
C03p86770 Brassica napus HOM05D005951 ORTHO05D007025 9.4e-90 334.0 230 73.9
BraA08t33722Z Brassica rapa HOM05D005951 ORTHO05D007025 9.4e-90 334.0 230 73.5
Solyc07g042570.3 Solanum lycopersicum HOM05D005951 ORTHO05D007025 9.4e-90 334.0 225 70.7
CAN.G54.13 Capsicum annuum HOM05D005951 ORTHO05D007025 1.6e-89 333.2 225 71.6
Phvul.003G127300 Phaseolus vulgaris HOM05D005951 ORTHO05D007025 1.6e-89 333.2 230 70.9
A08p17720 Brassica napus HOM05D005951 ORTHO05D007025 2.1e-89 332.8 230 73.0
DCAR_028530 Daucus carota HOM05D005951 ORTHO05D007025 2.1e-89 332.8 226 72.6
Thhalv10026154m.g Eutrema salsugineum HOM05D005951 ORTHO05D007025 2.1e-89 332.8 225 73.8
Peaxi162Scf00474g00521 Petunia axillaris HOM05D005951 ORTHO05D007025 2.7e-89 332.4 230 70.0
Sopen07g022260 Solanum pennellii HOM05D005951 ORTHO05D007025 2.7e-89 332.4 225 70.2
TWI34G0930 Tripterygium wilfordii HOM05D005951 ORTHO05D007025 2.7e-89 332.4 226 69.9
AT4G33250 Arabidopsis thaliana HOM05D005951 ORTHO05D007025 3.6e-89 332.0 226 73.0
Glyma.13G114300 Glycine max HOM05D005951 ORTHO05D007025 3.6e-89 332.0 230 70.0
Lalb_Chr13g0299191 Lupinus albus HOM05D005951 ORTHO05D007025 4.6e-89 331.6 228 72.4
Cfa002937 Carpinus fangiana HOM05D005951 ORTHO05D007025 7.9e-89 330.9 219 72.1
CANSAT56G0193 Cannabis sativa HOM05D005951 ORTHO05D007025 3.0e-88 328.9 227 70.9
Ca_21339_v3 Cicer arietinum L. HOM05D000240 ORTHO05D002721 3.0e-88 328.9 227 70.9
Zm00001eb401690 Zea mays HOM05D005951 ORTHO05D007025 3.0e-88 328.9 224 70.1
ATR0317G112 Amborella trichopoda HOM05D005951 ORTHO05D007025 5.1e-88 328.2 226 71.2
Os03g0182700 Oryza sativa ssp. japonica HOM05D005951 ORTHO05D007025 5.1e-88 328.2 224 68.8
Carub.0007s0721 Capsella rubella HOM05D005951 ORTHO05D007025 6.7e-88 327.8 224 71.9
Lalb_Chr07g0181411 Lupinus albus HOM05D005951 ORTHO05D007025 6.7e-88 327.8 231 69.7
COL.COLO4_21208 Corchorus olitorius HOM05D005951 ORTHO05D007025 8.8e-88 327.4 226 71.2
Medtr4g124640 Medicago truncatula HOM05D005951 ORTHO05D007025 1.5e-87 326.6 229 69.9
CANSAT56G0116 Cannabis sativa HOM05D005951 ORTHO05D007025 2.0e-87 326.2 227 70.5
HanXRQChr10g0319821 Helianthus annuus HOM05D005951 ORTHO05D007025 2.5e-87 325.9 226 71.7
Aa31LG5G9380 Aethionema arabicum HOM05D005951 ORTHO05D007025 4.3e-87 325.1 226 71.2
Haze_26069 Corylus avellana HOM05D005951 ORTHO05D007025 4.3e-87 325.1 234 69.2
PGR044G1586 Punica granatum HOM05D005951 ORTHO05D007025 4.3e-87 325.1 229 71.6
TPR.G12577 Trifolium pratense HOM05D005951 ORTHO05D007025 6.3e-86 321.2 220 71.4
PSO724G0923 Papaver somniferum HOM05D005951 ORTHO05D007025 1.1e-85 320.5 229 68.6
HPP92_004361 Vanilla planifolia HOM05D005951 ORTHO05D007025 1.1e-85 320.5 220 72.3
A03p61920 Brassica napus HOM05D000526 ORTHO05D007025 1.4e-85 320.1 255 65.9
PSO135G0575 Papaver somniferum HOM05D005951 ORTHO05D007025 2.4e-85 319.3 229 68.1
MBI13_g01673_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 3.1e-85 318.9 218 71.1
CDE07G2051 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 7.7e-84 314.3 228 67.5
Oeu000276.3 Olea europaea HOM05D005951 ORTHO05D007025 1.0e-83 313.9 303 56.4
ECA234G1587 Erigeron canadensis HOM05D005951 ORTHO05D007025 1.1e-82 310.5 218 67.4
SEGI_21232 Sequoiadendron giganteum HOM05D005951 ORTHO05D007025 3.2e-82 308.9 225 64.9
MELO3C015553.2 Cucumis melo HOM05D005951 ORTHO05D007025 4.7e-81 305.1 229 66.4
Lj7C692T6 Lonicera japonica HOM05D005951 ORTHO05D007025 2.3e-80 302.8 226 65.9
BcaNung02163 Brassica carinata HOM05D005951 ORTHO05D007025 3.7e-78 295.4 229 65.5
C07p59570 Brassica napus HOM05D005951 ORTHO05D007025 1.4e-77 293.5 229 65.9
vmacro17078 Vaccinium macrocarpon HOM05D005951 ORTHO05D007025 1.5e-76 290.0 321 50.5
BraA03t15230Z Brassica rapa HOM05D005951 ORTHO05D007025 2.6e-76 289.3 187 76.5
Hund26110 Selenicereus undatus HOM05D005951 ORTHO05D007025 4.5e-76 288.5 225 63.1
AUR62025338 Chenopodium quinoa HOM05D005951 ORTHO05D007025 1.0e-75 287.3 192 73.4
Nitab4.5_0003139g0080 Nicotiana tabacum HOM05D005951 ORTHO05D007025 1.7e-75 286.6 225 63.6
Actinidia30258 Actinidia chinensis HOM05D005951 ORTHO05D007025 5.0e-75 285.0 187 73.3
Zm00001eb401710 Zea mays HOM05D005951 ORTHO05D007025 5.0e-75 285.0 197 70.1
MBI19_g36230_MAGBIO Magnolia biondii HOM05D005951 ORTHO05D007025 1.4e-74 283.5 232 62.9
Mapoly0073s0056 Marchantia polymorpha HOM05D005951 ORTHO05D007025 2.5e-74 282.7 225 58.7
Pp3c21_14860 Physcomitrium patens HOM05D005951 ORTHO05D007025 3.9e-72 275.4 216 56.5
Pp3c18_14720 Physcomitrium patens HOM05D005951 ORTHO05D007025 2.0e-71 273.1 216 56.5
CDE06G1359 Ceratophyllum demersum HOM05D005951 ORTHO05D007025 3.3e-71 272.3 189 71.4
SMO239G0051 Selaginella moellendorffii HOM05D005951 ORTHO05D007025 7.7e-68 261.2 227 54.2
Rhsim05G0002100 Rhododendron simsii HOM05D005951 ORTHO05D007025 6.5e-67 258.1 232 57.3
Zm00001eb006150 Zea mays HOM05D005951 ORTHO05D007025 5.2e-64 248.4 167 71.3
BolC7t46402H Brassica oleracea HOM05D005951 ORTHO05D007025 4.4e-63 245.4 196 64.3
Sc08g0009170 Simmondsia chinensis HOM05D005951 ORTHO05D007025 1.8e-61 240.0 158 74.7
Migut.L01596 Erythranthe guttata HOM05D005951 ORTHO05D007025 4.5e-60 235.3 228 56.1
AagrBONN_evm.TU.Sc2ySwM_117.912 Anthoceros agrestis HOM05D005951 ORTHO05D007025 1.2e-52 210.7 149 64.4
CBR_g16046 Chara braunii HOM05D005951 ORTHO05D007025 6.6e-51 204.9 218 47.2
CARHR241300 Cardamine hirsuta HOM05D005951 ORTHO05D007025 1.5e-39 167.2 118 66.9
SalBow6G6500 Salvia bowleyana HOM05D005951 ORTHO05D007025 6.0e-36 155.2 97 79.4
Cre12.g515650 Chlamydomonas reinhardtii HOM05D005951 ORTHO05D007025 1.3e-35 154.1 188 39.9
MD02G1101200 Malus domestica HOM05D005951 ORTHO05D007025 7.1e-29 131.7 97 72.2
PRCOL_00003879 Prasinoderma coloniale HOM05D005951 ORTHO05D007025 1.1e-24 117.9 208 34.1


User provided reference genes

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