Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15157 Utricularia gibba HOM05D006516 ORTHO05D008083 1.1e-173 613.2 325 100.0
MSTRG.23495 Avicennia marina HOM05D006516 ORTHO05D008083 2.1e-103 379.8 315 68.6
Oeu011021.1 Olea europaea HOM05D006516 ORTHO05D008083 5.9e-98 361.7 313 61.3
Solyc04g015480.3 Solanum lycopersicum HOM05D006516 ORTHO05D008083 5.0e-97 358.6 220 79.1
Sopen04g007550 Solanum pennellii HOM05D006516 ORTHO05D008083 5.0e-97 358.6 220 79.1
TAR628G0816 Trochodendron aralioides HOM05D006516 ORTHO05D008083 2.8e-95 352.8 221 75.1
Migut.H00817 Erythranthe guttata HOM05D006516 ORTHO05D008083 6.8e-94 348.2 316 63.6
Dinv30343 Davidia involucrata HOM05D006516 ORTHO05D008083 1.2e-93 347.4 207 78.7
EL10Ac4g09645 Beta vulgaris HOM05D006516 ORTHO05D008083 9.8e-93 344.4 225 72.4
TWI31G0808 Tripterygium wilfordii HOM05D006516 ORTHO05D008083 2.2e-92 343.2 208 76.0
CSS0037144 Camellia sinensis var. sinensis HOM05D006516 ORTHO05D008083 1.9e-91 340.1 220 75.0
DCAR_019988 Daucus carota HOM05D006516 ORTHO05D008083 9.2e-91 337.8 200 79.5
FAN26G1784 Fragaria x ananassa HOM05D006516 ORTHO05D008083 9.2e-91 337.8 223 72.2
HanXRQChr15g0469261 Helianthus annuus HOM05D006516 ORTHO05D008083 9.2e-91 337.8 216 73.6
Potri.007G099900 Populus trichocarpa HOM05D006516 ORTHO05D008083 2.7e-90 336.3 205 74.1
Sc06g0006730 Simmondsia chinensis HOM05D006516 ORTHO05D008083 2.7e-90 336.3 200 76.0
RcHm_v2.0_Chr2g0122781 Rosa chinensis HOM05D006516 ORTHO05D008083 6.0e-90 335.1 210 74.8
FAN28G2638 Fragaria x ananassa HOM05D006516 ORTHO05D008083 7.8e-90 334.7 223 71.7
Lsat_1_v5_gn_5_69121 Lactuca sativa HOM05D006516 ORTHO05D008083 7.8e-90 334.7 207 75.8
Sabra07G0082800 Salix brachista HOM05D006516 ORTHO05D008083 1.7e-89 333.6 213 72.8
CDE08G1595 Ceratophyllum demersum HOM05D006516 ORTHO05D008083 2.3e-89 333.2 221 69.7
PSO170G3530 Papaver somniferum HOM05D006516 ORTHO05D008083 6.6e-89 331.6 220 70.9
THA.LOC104804401 Tarenaya hassleriana HOM05D006516 ORTHO05D008083 8.6e-89 331.3 212 72.2
Atru.chr4.1049 Acer truncatum HOM05D006516 ORTHO05D008083 1.1e-88 330.9 314 58.0
CsaV3_2G019760 Cucumis sativus L. HOM05D006516 ORTHO05D008083 1.5e-88 330.5 212 73.6
Manes.12G147400 Manihot esculenta HOM05D006516 ORTHO05D008083 1.5e-88 330.5 205 75.6
PGR119G1413 Punica granatum HOM05D006516 ORTHO05D008083 1.5e-88 330.5 205 74.1
Eucgr.I00111 Eucalyptus grandis HOM05D006516 ORTHO05D008083 2.5e-88 329.7 205 73.2
SGA_v2.0_scaffold54G19604 Striga asiatica HOM05D006516 ORTHO05D008083 3.3e-88 329.3 318 60.7
MELO3C023197.2 Cucumis melo HOM05D006516 ORTHO05D008083 4.3e-88 328.9 212 73.6
ECA233G3512 Erigeron canadensis HOM05D000595 ORTHO05D006275 7.3e-88 328.2 242 66.1
Ciclev10001875m.g Citrus clementina HOM05D006516 ORTHO05D008083 1.2e-87 327.4 239 66.1
AUR62000533 Chenopodium quinoa HOM05D006516 ORTHO05D008083 2.8e-87 326.2 217 70.0
CARHR241560 Cardamine hirsuta HOM05D006516 ORTHO05D008083 3.6e-87 325.9 222 70.7
Prupe.4G278200 Prunus persica HOM05D006516 ORTHO05D008083 3.6e-87 325.9 203 73.9
AL7G18070 Arabidopsis lyrata HOM05D006516 ORTHO05D008083 1.4e-86 323.9 213 71.8
Sed0013830 Sechium edule HOM05D006516 ORTHO05D008083 1.4e-86 323.9 204 73.5
Carub.0007s0699 Capsella rubella HOM05D006516 ORTHO05D008083 4.0e-86 322.4 233 66.1
Thecc.01G139400 Theobroma cacao HOM05D006516 ORTHO05D008083 4.0e-86 322.4 204 73.5
Aqoxy6G00267 Aquilegia oxysepala HOM05D006516 ORTHO05D008083 5.2e-86 322.0 225 68.0
CANSAT01G0949 Cannabis sativa HOM05D006516 ORTHO05D008083 5.2e-86 322.0 230 67.4
FAN19G1952 Fragaria x ananassa HOM05D006516 ORTHO05D008083 5.2e-86 322.0 206 74.3
BolC1t00500H Brassica oleracea HOM05D006516 ORTHO05D008021 6.8e-86 321.6 231 66.7
Cpa.g.sc37.17 Carica papaya HOM05D006516 ORTHO05D008083 6.8e-86 321.6 239 66.9
MD00G1064700 Malus domestica HOM05D006516 ORTHO05D008083 1.5e-85 320.5 221 69.2
BcaC09g52164 Brassica carinata HOM05D006516 ORTHO05D008083 2.0e-85 320.1 216 70.4
AT4G33480 Arabidopsis thaliana HOM05D006516 ORTHO05D008083 2.6e-85 319.7 234 65.4
arahy.Tifrunner.gnm1.ann1.8KJ0MH Arachis hypogaea HOM05D006516 ORTHO05D008083 9.8e-85 317.8 210 71.9
Cc02_g33920 Coffea canephora HOM05D006516 ORTHO05D008083 1.3e-84 317.4 189 79.4
A01p04790 Brassica napus HOM05D006516 ORTHO05D008083 2.2e-84 316.6 228 66.2
C01p05200 Brassica napus HOM05D006516 ORTHO05D008083 3.7e-84 315.8 228 66.2
BraA01t00462Z Brassica rapa HOM05D006516 ORTHO05D008083 4.9e-84 315.5 228 66.2
Gohir.A05G381800 Gossypium hirsutum HOM05D006516 ORTHO05D008083 8.3e-84 314.7 204 72.5
arahy.Tifrunner.gnm1.ann1.YP7URC Arachis hypogaea HOM05D006516 ORTHO05D008083 1.4e-83 313.9 196 74.0
Gohir.D04G033500 Gossypium hirsutum HOM05D006516 ORTHO05D008083 1.9e-83 313.5 204 72.1
Nitab4.5_0001663g0100 Nicotiana tabacum HOM05D006516 ORTHO05D008083 4.1e-83 312.4 228 69.7
CiPaw.03G117200 Carya illinoinensis HOM05D006516 ORTHO05D008083 5.4e-83 312.0 248 62.1
CAN.G676.43 Capsicum annuum HOM05D006516 ORTHO05D008083 4.6e-82 308.9 221 71.0
FAN23G2617 Fragaria x ananassa HOM05D006516 ORTHO05D008083 7.8e-82 308.1 221 69.2
Lalb_Chr13g0296721 Lupinus albus HOM05D006516 ORTHO05D008083 1.0e-81 307.8 242 60.3
QL10p040847 Quercus lobata HOM05D006516 ORTHO05D008083 1.0e-81 307.8 214 68.2
GSVIVG01022337001 Vitis vinifera HOM05D006516 ORTHO05D008083 4.3e-80 302.4 182 78.6
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 7.3e-80 301.6 212 69.3
Glyma.05G194700 Glycine max HOM05D006516 ORTHO05D008083 7.3e-80 301.6 203 70.0
Hund07224 Selenicereus undatus HOM05D006516 ORTHO05D008083 3.6e-79 299.3 255 56.9
Lj4g0011477 Lotus japonicus HOM05D006516 ORTHO05D008083 4.0e-78 295.8 223 64.6
Actinidia06588 Actinidia chinensis HOM05D006516 ORTHO05D008083 6.8e-78 295.0 242 60.3
PSO528G0185 Papaver somniferum HOM05D006516 ORTHO05D008083 6.8e-78 295.0 179 76.5
PGSC0003DMG400027234 Solanum tuberosum HOM05D006516 ORTHO05D008083 1.5e-77 293.9 299 56.5
CDE06G0289 Ceratophyllum demersum HOM05D000237 ORTHO05D008083 7.6e-77 291.6 171 77.2
Haze_25362 Corylus avellana HOM05D006516 ORTHO05D008083 7.6e-77 291.6 223 65.0
PSO063G7430 Papaver somniferum HOM05D006516 ORTHO05D008083 7.6e-77 291.6 179 76.0
Actinidia20043 Actinidia chinensis HOM05D006516 ORTHO05D008083 1.7e-76 290.4 242 59.5
Lalb_Chr08g0238111 Lupinus albus HOM05D006516 ORTHO05D008083 3.8e-76 289.3 220 63.6
Cfa002190 Carpinus fangiana HOM05D006516 ORTHO05D008083 3.2e-75 286.2 298 51.3
Duzib147G1587 Durio zibethinus HOM05D006516 ORTHO05D008083 3.2e-75 286.2 188 69.7
Thhalv10025682m.g Eutrema salsugineum HOM05D006516 ORTHO05D008083 2.1e-74 283.5 197 67.0
Medtr8g094200 Medicago truncatula HOM05D006516 ORTHO05D008083 3.5e-74 282.7 232 59.1
FvH4_1g25120 Fragaria vesca HOM05D006516 ORTHO05D008083 7.8e-74 281.6 174 73.6
arahy.Tifrunner.gnm1.ann1.I5MJF2 Arachis hypogaea HOM05D006516 ORTHO05D008083 1.0e-73 281.2 199 65.8
Ca_17618_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 4.3e-72 275.8 200 63.5
Gorai.012G037800 Gossypium raimondii HOM05D006516 ORTHO05D008083 5.6e-72 275.4 182 69.8
arahy.Tifrunner.gnm1.ann1.5F6SWA Arachis hypogaea HOM05D006516 ORTHO05D008083 7.3e-72 275.0 212 62.3
Psat5g086920 Pisum sativum HOM05D006516 ORTHO05D008083 9.6e-72 274.6 204 64.2
AUR62006880 Chenopodium quinoa HOM05D006516 ORTHO05D008083 4.7e-71 272.3 305 48.9
Zm00001eb434490 Zea mays HOM05D006516 ORTHO05D008083 1.8e-70 270.4 198 62.6
Glyma.06G156800 Glycine max HOM05D006516 ORTHO05D008083 1.3e-68 264.2 201 64.7
Lj1g0010918 Lotus japonicus HOM05D006516 ORTHO05D008083 1.1e-67 261.2 201 63.2
VMungo1309G1214 Vigna mungo HOM05D006516 ORTHO05D008083 7.8e-66 255.0 215 59.1
TPR.G37339 Trifolium pratense HOM05D006516 ORTHO05D008083 2.1e-63 246.9 195 59.0
COL.COLO4_12072 Corchorus olitorius HOM05D006516 ORTHO05D008083 2.8e-63 246.5 214 58.4
Medtr3g096860 Medicago truncatula HOM05D006516 ORTHO05D008083 5.3e-62 242.3 202 58.9
Psat7g044240 Pisum sativum HOM05D006516 ORTHO05D008083 9.0e-62 241.5 208 54.3
ATR0138G020 Amborella trichopoda HOM05D006516 ORTHO05D008083 1.1e-59 234.6 169 65.7
Phvul.009G153500 Phaseolus vulgaris HOM05D006516 ORTHO05D008083 7.9e-58 228.4 179 62.0
Mapoly0149s0016 Marchantia polymorpha HOM05D006516 ORTHO05D008083 3.9e-57 226.1 204 55.9
CiPaw.04G078600 Carya illinoinensis HOM05D006516 ORTHO05D008083 1.1e-56 224.6 237 50.6
Peaxi162Scf01713g00018 Petunia axillaris HOM05D006516 ORTHO05D008083 3.3e-56 223.0 140 74.3
Ca_16991_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.8e-55 219.9 258 50.0
Ca_17019_v3 Cicer arietinum L. HOM05D006516 ORTHO05D008083 2.8e-55 219.9 258 50.0
TPR.G33574 Trifolium pratense HOM05D006516 ORTHO05D008083 6.2e-55 218.8 168 61.9
Pp3c3_32640 Physcomitrium patens HOM05D006516 ORTHO05D008083 4.0e-54 216.1 205 53.7
Nn1g08886 Nelumbo nucifera HOM05D006516 ORTHO05D008083 7.1e-51 205.3 127 74.0
Nitab4.5_0000733g0220 Nicotiana tabacum HOM05D006516 ORTHO05D008083 2.1e-50 203.8 288 46.5
AagrBONN_evm.TU.Sc2ySwM_369.382 Anthoceros agrestis HOM05D006516 ORTHO05D008083 1.9e-48 197.2 207 49.8
Sp7g31210 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.9e-48 197.2 136 66.9
Aa31sc146G60 Aethionema arabicum HOM05D006516 ORTHO05D008083 1.3e-47 194.5 164 59.1
Rhsim10G0127700 Rhododendron simsii HOM05D006516 ORTHO05D008083 8.4e-44 181.8 192 50.0
ClCG02G000090 Citrullus lanatus HOM05D006516 ORTHO05D008083 3.0e-41 173.3 114 71.9
MBI06_g45441_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 7.2e-35 152.1 201 45.3
Aa31sc146G50 Aethionema arabicum HOM05D006516 ORTHO05D008083 3.4e-29 133.3 74 83.8
Hma1.2p1_1551F.1_g290160 Hydrangea macrophylla HOM05D006516 ORTHO05D008083 3.4e-29 133.3 88 68.2
Nn1g08902 Nelumbo nucifera HOM05D006516 ORTHO05D008083 1.0e-28 131.7 74 81.1
CBR_g51961 Chara braunii HOM05D006516 ORTHO05D008083 1.1e-27 128.3 233 35.2
Nn1g08901 Nelumbo nucifera HOM05D003028 ORTHO05D003465 6.5e-20 102.4 154 39.6
PRCOL_00004760 Prasinoderma coloniale HOM05D006516 ORTHO05D008083 3.2e-19 100.1 164 34.1
Peaxi162Scf01713g00017 Petunia axillaris HOM05D006516 ORTHO05D008083 5.5e-19 99.4 54 87.0
MCO05G028 Micromonas commoda HOM05D006516 ORTHO05D008083 4.4e-16 89.7 175 33.1
Sp7g31200 Schrenkiella parvula HOM05D006516 ORTHO05D008083 1.4e-14 84.7 48 85.4
COL.COLO4_30311 Corchorus olitorius HOM05D000221 ORTHO05D008083 3.8e-12 76.6 47 72.3
MBI06_g33106_MAGBIO Magnolia biondii HOM05D006516 ORTHO05D008083 1.6e-10 71.2 77 48.1
FAN28G1699 Fragaria x ananassa HOM05D006516 ORTHO05D008083 4.1e-06 56.6 33 81.8


User provided reference genes

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