Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g15151 Utricularia gibba HOM05D006319 ORTHO05D007963 6.2e-132 474.2 246 100.0
MSTRG.23490 Avicennia marina HOM05D006319 ORTHO05D007963 4.9e-68 261.9 189 69.8
SGA_v2.0_scaffold273G46467 Striga asiatica HOM05D006319 ORTHO05D007963 4.9e-68 261.9 238 60.1
Oeu011026.1 Olea europaea HOM05D006319 ORTHO05D007963 2.4e-67 259.6 242 59.5
Migut.H00824 Erythranthe guttata HOM05D006319 ORTHO05D007963 2.9e-65 252.7 188 69.1
MELO3C023216.2 Cucumis melo HOM05D006319 ORTHO05D007963 1.5e-64 250.4 189 66.1
ClCG02G000280 Citrullus lanatus HOM05D005757 ORTHO05D007090 2.1e-63 246.5 212 60.4
Aqoxy6G00315 Aquilegia oxysepala HOM05D006319 ORTHO05D007963 3.6e-63 245.7 235 56.2
CsaV3_2G019570 Cucumis sativus L. HOM05D006319 ORTHO05D007963 3.6e-63 245.7 187 65.8
vmacro18688 Vaccinium macrocarpon HOM05D006319 ORTHO05D007963 8.0e-63 244.6 189 62.4
Dinv05221 Davidia involucrata HOM05D006319 ORTHO05D007963 1.4e-62 243.8 236 55.9
GSVIVG01022331001 Vitis vinifera HOM05D006319 ORTHO05D007963 2.3e-62 243.0 218 57.3
Manes.12G159300 Manihot esculenta HOM05D006319 ORTHO05D007963 3.0e-62 242.7 229 57.2
Eucgr.H05122 Eucalyptus grandis HOM05D006319 ORTHO05D007963 5.2e-62 241.9 193 62.7
Duzib187G0662 Durio zibethinus HOM05D006319 ORTHO05D007963 2.6e-61 239.6 194 62.9
AUR62000524 Chenopodium quinoa HOM05D006319 ORTHO05D007963 4.4e-61 238.8 192 63.0
Hma1.2p1_0236F.1_g099250 Hydrangea macrophylla HOM05D006319 ORTHO05D007963 5.7e-61 238.4 190 63.7
Nn1g08971 Nelumbo nucifera HOM05D006319 ORTHO05D007963 7.5e-61 238.0 190 63.7
Potri.007G100800 Populus trichocarpa HOM05D006319 ORTHO05D007963 9.8e-61 237.7 248 51.6
QL10p041175 Quercus lobata HOM05D006319 ORTHO05D007963 9.8e-61 237.7 188 62.8
AUR62006869 Chenopodium quinoa HOM05D006319 ORTHO05D007963 1.7e-60 236.9 192 62.5
CSS0021790 Camellia sinensis var. sinensis HOM05D006319 ORTHO05D007963 2.2e-60 236.5 213 58.7
Lalb_Chr08g0238171 Lupinus albus HOM05D006319 ORTHO05D007963 2.2e-60 236.5 189 60.8
CiPaw.04G079200 Carya illinoinensis HOM05D006319 ORTHO05D007963 2.9e-60 236.1 190 63.2
SalBow1G4836 Salvia bowleyana HOM05D006319 ORTHO05D007963 4.9e-60 235.3 190 65.8
Actinidia16521 Actinidia chinensis HOM05D006319 ORTHO05D007963 8.3e-60 234.6 199 59.3
Thecc.01G138200 Theobroma cacao HOM05D006319 ORTHO05D007963 1.1e-59 234.2 189 61.4
COL.COLO4_35821 Corchorus olitorius HOM05D006319 ORTHO05D007963 1.4e-59 233.8 183 63.9
MD01G1000300 Malus domestica HOM05D006319 ORTHO05D007963 2.4e-59 233.0 199 59.8
Solyc04g009420.3 Solanum lycopersicum HOM05D006319 ORTHO05D007963 4.1e-59 232.3 194 60.3
CANSAT01G1475 Cannabis sativa HOM05D006319 ORTHO05D007963 7.0e-59 231.5 195 62.1
PGSC0003DMG400032538 Solanum tuberosum HOM05D006319 ORTHO05D007963 7.0e-59 231.5 187 61.0
Ciclev10002322m.g Citrus clementina HOM05D006319 ORTHO05D007963 9.2e-59 231.1 219 58.4
Cc02_g33910 Coffea canephora HOM05D006319 ORTHO05D007963 1.2e-58 230.7 246 55.7
Prupe.4G276300 Prunus persica HOM05D006319 ORTHO05D007963 1.2e-58 230.7 197 59.4
Sopen04g004550 Solanum pennellii HOM05D006319 ORTHO05D007963 1.2e-58 230.7 188 61.7
arahy.Tifrunner.gnm1.ann1.7TU5G5 Arachis hypogaea HOM05D006319 ORTHO05D007963 1.6e-58 230.3 166 66.3
TWI31G0926 Tripterygium wilfordii HOM05D006319 ORTHO05D007963 1.6e-58 230.3 232 53.0
Phvul.009G154200 Phaseolus vulgaris HOM05D006319 ORTHO05D007963 2.0e-58 229.9 192 60.4
Medtr3g096750 Medicago truncatula HOM05D006319 ORTHO05D007963 2.7e-58 229.6 220 55.0
BcaB01g03112 Brassica carinata HOM05D006319 ORTHO05D007963 3.5e-58 229.2 225 54.2
Gorai.011G118400 Gossypium raimondii HOM05D006319 ORTHO05D007963 4.6e-58 228.8 192 61.5
Lj1g0009956 Lotus japonicus HOM05D006319 ORTHO05D007963 4.6e-58 228.8 182 63.7
Glyma.06G156100 Glycine max HOM05D006319 ORTHO05D007963 5.9e-58 228.4 193 60.1
RcHm_v2.0_Chr2g0122611 Rosa chinensis HOM05D006319 ORTHO05D007963 5.9e-58 228.4 216 56.9
Hund07232 Selenicereus undatus HOM05D006319 ORTHO05D007963 5.9e-58 228.4 197 58.9
Atru.chr4.1000 Acer truncatum HOM05D006319 ORTHO05D007963 7.8e-58 228.0 238 51.3
QL10p041464 Quercus lobata HOM05D006319 ORTHO05D007963 7.8e-58 228.0 166 66.9
PGR102G0633 Punica granatum HOM05D006319 ORTHO05D007963 1.0e-57 227.6 189 60.3
Thhalv10017176m.g Eutrema salsugineum HOM05D006319 ORTHO05D007963 1.3e-57 227.3 188 62.2
arahy.Tifrunner.gnm1.ann1.P5PFFU Arachis hypogaea HOM05D006319 ORTHO05D007963 2.3e-57 226.5 192 59.4
A04p21670 Brassica napus HOM05D006319 ORTHO05D007963 2.3e-57 226.5 225 54.2
BolC4t27297H Brassica oleracea HOM05D006319 ORTHO05D007963 3.0e-57 226.1 229 53.7
BraA04t17731Z Brassica rapa HOM05D006319 ORTHO05D007963 3.0e-57 226.1 229 54.1
Psat5g060360 Pisum sativum HOM05D006319 ORTHO05D007963 3.9e-57 225.7 159 67.9
THA.LOC104826346 Tarenaya hassleriana HOM05D006319 ORTHO05D007963 3.9e-57 225.7 205 59.0
BcaC02g08157 Brassica carinata HOM05D006319 ORTHO05D007963 5.0e-57 225.3 225 54.2
C04p57790 Brassica napus HOM05D006319 ORTHO05D007963 5.0e-57 225.3 225 54.2
Cpa.g.sc37.12 Carica papaya HOM05D006319 ORTHO05D007963 6.6e-57 224.9 213 56.8
AL4G23100 Arabidopsis lyrata HOM05D006319 ORTHO05D007963 8.6e-57 224.6 237 54.4
CAN.G186.2 Capsicum annuum HOM05D006319 ORTHO05D007963 8.6e-57 224.6 161 67.1
Nitab4.5_0004105g0090 Nicotiana tabacum HOM05D006319 ORTHO05D007963 8.6e-57 224.6 188 60.1
VMungo0464G0362 Vigna mungo HOM05D006319 ORTHO05D007963 8.6e-57 224.6 168 65.5
arahy.Tifrunner.gnm1.ann1.4SM61H Arachis hypogaea HOM05D006319 ORTHO05D007963 1.1e-56 224.2 166 64.5
arahy.Tifrunner.gnm1.ann1.B4AV5R Arachis hypogaea HOM05D006319 ORTHO05D007963 1.1e-56 224.2 166 64.5
BcaB06g28232 Brassica carinata HOM05D006319 ORTHO05D007963 1.5e-56 223.8 227 53.7
FAN23G2801 Fragaria x ananassa HOM05D006319 ORTHO05D007963 1.5e-56 223.8 184 60.9
Lj7A582T32 Lonicera japonica HOM05D006319 ORTHO05D007963 2.5e-56 223.0 163 66.3
Ah.06g191080 Amaranthus hybridus HOM05D006319 ORTHO05D007963 4.3e-56 222.2 200 58.5
Nitab4.5_0013462g0010 Nicotiana tabacum HOM05D006319 ORTHO05D007963 4.3e-56 222.2 188 59.6
TAR628G0979 Trochodendron aralioides HOM05D006319 ORTHO05D007963 4.3e-56 222.2 223 54.3
EL10Ac4g09632 Beta vulgaris HOM05D006319 ORTHO05D007963 5.6e-56 221.9 190 58.9
BcaC01g04984 Brassica carinata HOM05D006319 ORTHO05D007963 5.6e-56 221.9 186 61.3
C03p31420 Brassica napus HOM05D006319 ORTHO05D007963 5.6e-56 221.9 186 61.3
DCAR_009594 Daucus carota HOM05D006319 ORTHO05D007963 9.5e-56 221.1 158 67.1
FvH4_1g24980 Fragaria vesca HOM05D006319 ORTHO05D007963 9.5e-56 221.1 159 67.3
Glyma.04G209900 Glycine max HOM05D006319 ORTHO05D007963 1.2e-55 220.7 159 67.3
AT2G28605 Arabidopsis thaliana HOM05D006319 ORTHO05D007963 1.6e-55 220.3 202 57.9
Sc02g0003550 Simmondsia chinensis HOM05D006319 ORTHO05D007963 1.6e-55 220.3 214 53.7
A03p26290 Brassica napus HOM05D006319 ORTHO05D007963 2.1e-55 219.9 186 60.8
BraA03t11843Z Brassica rapa HOM05D006319 ORTHO05D007963 2.8e-55 219.5 186 60.8
PSO782G1065 Papaver somniferum HOM05D006319 ORTHO05D007963 2.8e-55 219.5 161 65.2
Sp4g11430 Schrenkiella parvula HOM05D006319 ORTHO05D007963 3.6e-55 219.2 229 54.1
Carub.0004s0957 Capsella rubella HOM05D006319 ORTHO05D007963 8.0e-55 218.0 231 54.5
CARHR121630 Cardamine hirsuta HOM05D006319 ORTHO05D007963 1.0e-54 217.6 188 60.6
FAN28G2219 Fragaria x ananassa HOM05D006319 ORTHO05D007963 4.0e-54 215.7 202 56.4
MBI06_g35206_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 4.0e-54 215.7 185 60.0
CDE08G0565 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 6.8e-54 214.9 184 60.9
Aa31LG5G7620 Aethionema arabicum HOM05D005759 ORTHO05D007172 8.9e-54 214.5 185 59.5
BolC3t15489H Brassica oleracea HOM05D006319 ORTHO05D007963 2.6e-53 213.0 160 65.6
FAN19G2853 Fragaria x ananassa HOM05D006319 ORTHO05D007963 2.2e-52 209.9 233 52.8
Zm00001eb422700 Zea mays HOM05D006319 ORTHO05D007963 4.9e-52 208.8 161 62.7
ATR0584G200 Amborella trichopoda HOM05D006319 ORTHO05D007963 1.1e-51 207.6 159 66.0
HPP92_009279 Vanilla planifolia HOM05D006319 ORTHO05D007963 1.2e-50 204.1 210 54.3
ECA246G1987 Erigeron canadensis HOM05D000001 ORTHO05D000003 4.6e-50 202.2 156 61.5
Eucgr.H02106 Eucalyptus grandis HOM05D006319 ORTHO05D007963 8.6e-49 198.0 234 50.9
HanXRQChr12g0378071 Helianthus annuus HOM05D006319 ORTHO05D007963 1.1e-48 197.6 233 49.4
Peaxi162Scf00842g00214 Petunia axillaris HOM05D006319 ORTHO05D007963 2.1e-47 193.4 136 68.4
arahy.Tifrunner.gnm1.ann1.E0QW5U Arachis hypogaea HOM05D006319 ORTHO05D007963 5.2e-46 188.7 166 57.8
arahy.Tifrunner.gnm1.ann1.GQG991 Arachis hypogaea HOM05D006319 ORTHO05D007963 2.0e-45 186.8 159 59.1
SEGI_06099 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 2.2e-44 183.3 159 59.1
SEGI_37383 Sequoiadendron giganteum HOM05D006319 ORTHO05D007963 8.3e-44 181.4 155 59.4
Pp3c8_18060 Physcomitrium patens HOM05D006319 ORTHO05D007963 6.2e-39 165.2 181 50.8
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 1.2e-37 161.0 185 45.4
AagrBONN_evm.TU.Sc2ySwM_228.2950 Anthoceros agrestis HOM05D006319 ORTHO05D007963 1.5e-37 160.6 198 43.9
Lsat_1_v5_gn_5_34560 Lactuca sativa HOM05D006319 ORTHO05D007963 5.8e-37 158.7 160 55.6
Potri.005G068500 Populus trichocarpa HOM05D006319 ORTHO05D007963 3.5e-34 149.4 187 46.0
Mapoly0092s0018 Marchantia polymorpha HOM05D006319 ORTHO05D007963 2.8e-31 139.8 154 48.1
SMO117G0258 Selaginella moellendorffii HOM05D006319 ORTHO05D007963 1.2e-29 134.4 140 49.3
CBR_g49982 Chara braunii HOM05D006319 ORTHO05D007963 2.0e-29 133.7 140 48.6
Ca_16986_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 4.4e-29 132.5 91 68.1
Gohir.D10G108000 Gossypium hirsutum HOM05D006319 ORTHO05D007963 2.4e-27 126.7 192 41.7
Gohir.A10G068160 Gossypium hirsutum HOM05D006319 ORTHO05D007963 1.0e-25 121.3 192 40.1
FAN26G1803 Fragaria x ananassa HOM05D001650 ORTHO05D001592 2.3e-25 120.2 88 63.6
Manes.12G147800 Manihot esculenta HOM05D006319 ORTHO05D007963 3.0e-25 119.8 104 59.6
Cre16.g678851 Chlamydomonas reinhardtii HOM05D006319 ORTHO05D007963 6.6e-25 118.6 156 39.1
TPR.G33590 Trifolium pratense HOM05D001650 ORTHO05D001592 4.3e-24 115.9 139 49.6
TPR.G10777 Trifolium pratense HOM05D006319 ORTHO05D007963 5.6e-24 115.5 82 67.1
arahy.Tifrunner.gnm1.ann1.PNID9I Arachis hypogaea HOM05D006319 ORTHO05D007963 1.4e-22 110.9 81 63.0
arahy.Tifrunner.gnm1.ann1.Q7YENP Arachis hypogaea HOM05D006319 ORTHO05D007963 1.8e-22 110.5 81 63.0
FAN23G0464 Fragaria x ananassa HOM05D006319 ORTHO05D007963 5.3e-22 109.0 85 62.4
arahy.Tifrunner.gnm1.ann1.949H7S Arachis hypogaea HOM05D006319 ORTHO05D007963 1.5e-21 107.5 81 61.7
AagrBONN_evm.TU.Sc2ySwM_362.516 Anthoceros agrestis HOM05D005157 ORTHO05D006652 2.6e-21 106.7 141 44.0
Os04g0434900 Oryza sativa ssp. japonica HOM05D006319 ORTHO05D007963 2.1e-18 97.1 69 63.8
MCO01G211 Micromonas commoda HOM05D006319 ORTHO05D007963 9.6e-16 88.2 155 34.8
arahy.Tifrunner.gnm1.ann1.RE08FE Arachis hypogaea HOM05D006319 ORTHO05D007963 2.1e-15 87.0 93 50.5
CDE08G0611 Ceratophyllum demersum HOM05D006319 ORTHO05D007963 9.9e-13 78.2 83 56.6
arahy.Tifrunner.gnm1.ann1.I50TU7 Arachis hypogaea HOM05D006319 ORTHO05D007963 4.2e-11 72.8 79 44.3
PRCOL_00004434 Prasinoderma coloniale HOM05D006319 ORTHO05D007963 2.3e-09 67.0 111 36.9
MBI17_g01556_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 2.5e-08 63.5 59 49.2
MBI11_g02539_MAGBIO Magnolia biondii HOM05D006319 ORTHO05D007963 4.8e-07 59.3 79 45.6
arahy.Tifrunner.gnm1.ann1.FYW6BY Arachis hypogaea HOM05D006608 ORTHO05D008316 1.8e-06 57.4 209 25.8
arahy.Tifrunner.gnm1.ann1.0RV1NN Arachis hypogaea HOM05D006608 ORTHO05D008316 2.4e-06 57.0 209 25.8


User provided reference genes

Program Settings