Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 0.0e+00 1415.2 731 100.0
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 1.2e-244 850.1 731 65.0
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 3.4e-242 842.0 739 63.6
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 1.4e-240 836.6 733 63.6
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 4.4e-218 761.9 746 60.1
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 2.2e-217 759.6 746 59.2
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 3.5e-215 752.3 750 59.1
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 1.3e-214 750.4 751 58.5
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 8.7e-214 747.7 744 58.7
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 4.8e-212 741.9 732 57.5
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 9.0e-211 737.6 747 57.0
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 4.4e-210 735.3 750 57.6
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 5.8e-210 734.9 748 57.0
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 6.4e-209 731.5 731 57.6
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 6.4e-209 731.5 761 57.6
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 3.2e-208 729.2 747 57.6
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 4.2e-208 728.8 745 57.2
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 7.1e-208 728.0 767 57.5
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 7.1e-208 728.0 739 57.0
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 9.3e-208 727.6 737 57.0
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 1.6e-207 726.9 749 57.3
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 2.7e-207 726.1 753 57.2
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 1.3e-206 723.8 749 57.4
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 1.3e-206 723.8 756 57.1
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 2.3e-206 723.0 748 56.8
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 3.0e-206 722.6 734 59.3
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.0e-206 722.6 749 57.3
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 5.1e-206 721.8 760 57.4
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.9e-205 719.9 734 56.8
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 3.3e-205 719.2 750 57.1
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 7.4e-205 718.0 761 56.9
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 7.4e-205 718.0 750 55.9
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.3e-204 717.2 733 57.2
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 1.6e-204 716.8 735 57.3
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 1.6e-204 716.8 731 58.5
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 8.1e-204 714.5 736 55.4
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 8.1e-204 714.5 739 56.2
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 4.0e-203 712.2 752 56.9
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 5.3e-203 711.8 743 55.6
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 6.9e-203 711.4 748 56.0
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.0e-202 709.9 744 55.8
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 2.6e-202 709.5 738 55.6
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 4.5e-202 708.8 750 56.0
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 5.8e-202 708.4 741 56.1
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 2.4e-200 703.0 739 55.2
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 4.2e-200 702.2 725 57.0
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 1.2e-199 700.7 759 55.1
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 2.1e-199 699.9 739 55.8
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 2.7e-199 699.5 745 55.3
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 6.0e-199 698.4 760 54.3
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 6.0e-199 698.4 742 55.7
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.8e-198 696.8 725 56.8
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 3.0e-198 696.0 729 55.7
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.5e-197 693.7 757 55.1
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 4.3e-197 692.2 752 54.8
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 1.3e-196 690.6 724 56.4
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.6e-196 690.3 715 57.6
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 4.8e-196 688.7 732 55.1
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.1e-195 687.6 724 56.1
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.4e-195 686.4 724 56.4
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 6.9e-195 684.9 725 56.3
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.0e-193 681.0 749 55.7
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 1.4e-192 677.2 747 54.6
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 2.5e-192 676.4 734 55.6
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 1.2e-191 674.1 748 54.0
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 7.9e-191 671.4 757 54.0
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 7.9e-191 671.4 748 55.1
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 1.8e-190 670.2 815 50.7
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 3.9e-190 669.1 758 54.4
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 5.1e-190 668.7 744 54.8
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 8.7e-190 667.9 744 53.0
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.5e-189 666.4 957 46.6
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.3e-188 664.1 749 53.4
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 4.8e-188 662.1 744 52.8
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 1.1e-187 661.0 760 53.7
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 1.0e-185 654.4 745 51.4
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.7e-185 653.7 748 53.5
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 2.5e-184 649.8 738 54.7
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 1.4e-179 634.0 798 50.9
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 6.9e-179 631.7 744 51.5
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 9.0e-179 631.3 664 54.1
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 7.7e-178 628.2 739 50.6
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 1.0e-177 627.9 739 50.7
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 6.5e-177 625.2 750 50.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 1.1e-176 624.4 941 45.1
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.4e-176 624.0 736 50.1
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 1.0e-174 617.8 756 50.5
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 1.4e-174 617.5 738 50.5
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 5.1e-174 615.5 748 51.3
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 3.3e-173 612.8 739 50.5
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 5.7e-173 612.1 758 49.6
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 1.7e-172 610.5 738 50.1
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.1e-171 607.8 752 49.9
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 2.6e-170 603.2 739 50.5
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.0e-161 574.7 623 53.3
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 2.9e-161 573.2 574 59.1
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.7e-159 566.6 651 52.4
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 4.8e-156 555.8 650 50.2
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.4e-147 526.9 598 52.2
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 3.1e-147 526.6 575 55.1
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 5.2e-142 509.2 612 51.0
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.4e-139 501.1 726 44.6
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 9.8e-133 478.4 617 47.6
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 5.4e-123 446.0 561 49.4
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 1.6e-122 444.5 541 51.4
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 7.5e-117 425.6 789 37.6
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 2.5e-112 410.6 816 36.6
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 3.0e-105 387.1 725 35.4
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 6.4e-92 342.8 368 56.0
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 3.2e-83 313.9 285 61.4
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.7e-76 291.6 440 44.8
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 6.9e-70 269.6 464 42.0
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 8.2e-63 246.1 466 38.2
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 6.7e-57 226.5 289 48.4
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 1.2e-50 205.7 185 58.4
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.2e-47 194.9 268 45.9
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 9.4e-43 179.5 153 66.0
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 9.4e-43 179.5 192 53.1
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 6.7e-41 173.3 373 37.3
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.5e-35 154.8 154 55.2
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.0e-33 149.4 126 69.0
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 4.1e-30 137.5 133 61.7
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 9.1e-30 136.3 126 58.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 6.8e-25 120.2 97 63.9
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 1.2e-24 119.4 108 65.7
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 2.0e-24 118.6 139 52.5
unitig_736.g22376 Utricularia gibba HOM05D005929 ORTHO05D425945 2.7e-13 81.6 72 63.9
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 7.3e-11 73.6 152 35.5
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 1.2e-10 72.8 125 36.0
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 4.1e-06 57.8 35 82.9


User provided reference genes

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