Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14948 Utricularia gibba HOM05D003103 ORTHO05D003999 5.4e-107 391.0 190 100.0
MSTRG.3432 Avicennia marina HOM05D003103 ORTHO05D003999 1.2e-90 336.7 187 86.6
Migut.H00421 Erythranthe guttata HOM05D003103 ORTHO05D003999 1.2e-90 336.7 192 86.5
SGA_v2.0_scaffold62G21520 Striga asiatica HOM05D003103 ORTHO05D003999 3.5e-90 335.1 183 86.9
SalBow5G1645 Salvia bowleyana HOM05D003103 ORTHO05D003999 4.6e-90 334.7 186 86.6
Actinidia16477 Actinidia chinensis HOM05D003103 ORTHO05D003999 8.6e-89 330.5 187 84.0
Dinv30000 Davidia involucrata HOM05D003103 ORTHO05D003999 8.6e-89 330.5 186 83.9
DCAR_010882 Daucus carota HOM05D003103 ORTHO05D003999 5.6e-88 327.8 186 84.9
Lj7C70G24 Lonicera japonica HOM05D003103 ORTHO05D003999 7.3e-88 327.4 185 85.9
CSS0011350 Camellia sinensis var. sinensis HOM05D003103 ORTHO05D003999 9.5e-88 327.0 186 81.7
MSTRG.15382 Avicennia marina HOM05D003103 ORTHO05D003999 2.1e-87 325.9 188 85.1
MELO3C020858.2 Cucumis melo HOM05D003103 ORTHO05D003999 3.6e-87 325.1 186 83.3
SalBow5G5600 Salvia bowleyana HOM05D003103 ORTHO05D003999 3.6e-87 325.1 197 81.2
ClCG02G012340 Citrullus lanatus HOM05D003103 ORTHO05D003999 4.7e-87 324.7 186 83.9
Actinidia12044 Actinidia chinensis HOM05D003103 ORTHO05D003999 6.1e-87 324.3 186 84.4
Lj4C151G10 Lonicera japonica HOM05D003103 ORTHO05D003999 6.1e-87 324.3 186 84.4
Rhsim08G0099700 Rhododendron simsii HOM05D003103 ORTHO05D003999 8.0e-87 323.9 190 80.0
CsaV3_2G016480 Cucumis sativus L. HOM05D003103 ORTHO05D003999 1.4e-86 323.2 186 82.3
Cfa004034 Carpinus fangiana HOM05D003103 ORTHO05D003999 2.3e-86 322.4 188 79.8
Nitab4.5_0002029g0060 Nicotiana tabacum HOM05D003103 ORTHO05D003999 3.1e-86 322.0 174 85.6
CANSAT01G0334 Cannabis sativa HOM05D003103 ORTHO05D003999 4.0e-86 321.6 186 83.3
Sed0023462 Sechium edule HOM05D003103 ORTHO05D003999 6.8e-86 320.9 186 82.8
Solyc02g093290.3 Solanum lycopersicum HOM05D003103 ORTHO05D003999 8.9e-86 320.5 174 85.6
Sopen02g037850 Solanum pennellii HOM05D003103 ORTHO05D003999 8.9e-86 320.5 174 85.6
Sed0020253 Sechium edule HOM05D003103 ORTHO05D003999 1.2e-85 320.1 186 82.3
TWI73G1128 Tripterygium wilfordii HOM05D003103 ORTHO05D003999 1.5e-85 319.7 186 81.2
Peaxi162Scf00450g00126 Petunia axillaris HOM05D003103 ORTHO05D003999 4.4e-85 318.2 185 81.6
PGSC0003DMG400004012 Solanum tuberosum HOM05D003103 ORTHO05D003999 4.4e-85 318.2 174 85.1
Sopen03g008560 Solanum pennellii HOM05D003103 ORTHO05D003999 5.8e-85 317.8 187 82.4
CAN.G370.47 Capsicum annuum HOM05D003103 ORTHO05D003999 7.5e-85 317.4 187 79.7
Cpa.g.sc55.133 Carica papaya HOM05D003103 ORTHO05D003999 9.8e-85 317.0 186 81.2
Solyc03g044430.3 Solanum lycopersicum HOM05D003103 ORTHO05D003999 1.3e-84 316.6 187 82.4
TWI09G1566 Tripterygium wilfordii HOM05D003103 ORTHO05D003999 1.3e-84 316.6 180 82.8
TAR381G0597 Trochodendron aralioides HOM05D003103 ORTHO05D003999 1.3e-84 316.6 186 80.6
arahy.Tifrunner.gnm1.ann1.556YNA Arachis hypogaea HOM05D003103 ORTHO05D003999 1.7e-84 316.2 183 81.4
Peaxi162Scf00685g00413 Petunia axillaris HOM05D003103 ORTHO05D003999 1.7e-84 316.2 188 80.3
Sabra05G0111100 Salix brachista HOM05D003103 ORTHO05D003999 1.7e-84 316.2 189 79.9
COL.COLO4_11442 Corchorus olitorius HOM05D003103 ORTHO05D003999 2.2e-84 315.8 186 80.1
SGA_v2.0_scaffold15G07323 Striga asiatica HOM05D003103 ORTHO05D003999 2.2e-84 315.8 242 67.4
TAR625G1079 Trochodendron aralioides HOM05D003103 ORTHO05D003999 2.2e-84 315.8 186 81.7
arahy.Tifrunner.gnm1.ann1.6SC4JI Arachis hypogaea HOM05D003103 ORTHO05D003999 2.9e-84 315.5 183 80.9
Ca_24758_v3 Cicer arietinum L. HOM05D003103 ORTHO05D003999 3.7e-84 315.1 187 79.1
Duzib264G0053 Durio zibethinus HOM05D003103 ORTHO05D003999 3.7e-84 315.1 185 80.5
Potri.005G139800 Populus trichocarpa HOM05D003103 ORTHO05D003999 4.9e-84 314.7 189 78.8
QL06p040980 Quercus lobata HOM05D003103 ORTHO05D003999 6.4e-84 314.3 186 80.6
Atru.chr3.305 Acer truncatum HOM05D003103 ORTHO05D003999 8.3e-84 313.9 176 84.1
Phvul.003G243000 Phaseolus vulgaris HOM05D003103 ORTHO05D003999 8.3e-84 313.9 187 80.7
Duzib147G0775 Durio zibethinus HOM05D003103 ORTHO05D003999 1.1e-83 313.5 187 79.7
Eucgr.I00907 Eucalyptus grandis HOM05D003103 ORTHO05D003999 1.1e-83 313.5 174 83.3
Thecc.01G058700 Theobroma cacao HOM05D003103 ORTHO05D003999 1.1e-83 313.5 180 81.7
ECA238G1051 Erigeron canadensis HOM05D003103 ORTHO05D003999 1.4e-83 313.2 190 80.0
Nitab4.5_0002646g0010 Nicotiana tabacum HOM05D003103 ORTHO05D003999 1.4e-83 313.2 189 79.9
Prupe.7G131500 Prunus persica HOM05D003103 ORTHO05D003999 1.4e-83 313.2 186 80.6
PGR102G2176 Punica granatum HOM05D003103 ORTHO05D003999 1.4e-83 313.2 186 80.6
VMungo0251G1095 Vigna mungo HOM05D003103 ORTHO05D003999 1.9e-83 312.8 187 80.2
CAN.G11.2 Capsicum annuum HOM05D003103 ORTHO05D003999 2.4e-83 312.4 186 80.1
CiPaw.01G016600 Carya illinoinensis HOM05D003103 ORTHO05D003999 2.4e-83 312.4 188 78.2
Ciclev10025298m.g Citrus clementina HOM05D003103 ORTHO05D003999 2.4e-83 312.4 187 80.2
ECA246G4532 Erigeron canadensis HOM05D003103 ORTHO05D003999 5.4e-83 311.2 186 79.6
Nitab4.5_0001064g0060 Nicotiana tabacum HOM05D003103 ORTHO05D003999 5.4e-83 311.2 189 79.4
FAN26G0572 Fragaria x ananassa HOM05D003103 ORTHO05D003999 7.0e-83 310.8 174 82.8
Gorai.007G214700 Gossypium raimondii HOM05D003103 ORTHO05D003999 1.2e-82 310.1 186 79.6
MD15G1285500 Malus domestica HOM05D003103 ORTHO05D003999 1.2e-82 310.1 188 78.2
Potri.007G045400 Populus trichocarpa HOM05D003103 ORTHO05D003999 1.2e-82 310.1 174 83.3
Gohir.A11G193300 Gossypium hirsutum HOM05D003103 ORTHO05D003999 1.6e-82 309.7 186 79.0
Manes.12G104000 Manihot esculenta HOM05D003103 ORTHO05D003999 1.6e-82 309.7 174 82.8
HanXRQChr12g0381311 Helianthus annuus HOM05D003103 ORTHO05D003999 2.0e-82 309.3 174 83.9
Glyma.05G094000 Glycine max HOM05D003103 ORTHO05D003999 2.7e-82 308.9 187 80.2
Gohir.D12G070200 Gossypium hirsutum HOM05D003103 ORTHO05D003999 2.7e-82 308.9 183 78.1
Gorai.008G077200 Gossypium raimondii HOM05D003103 ORTHO05D003999 2.7e-82 308.9 183 78.1
Sabra07G0040400 Salix brachista HOM05D003103 ORTHO05D003999 2.7e-82 308.9 174 82.8
Haze_15380 Corylus avellana HOM05D003103 ORTHO05D003999 3.5e-82 308.5 208 71.6
Gohir.D11G200400 Gossypium hirsutum HOM05D003103 ORTHO05D003999 3.5e-82 308.5 186 79.0
Lalb_Chr16g0388671 Lupinus albus HOM05D003103 ORTHO05D003999 3.5e-82 308.5 181 80.1
FvH4_1g16212 Fragaria vesca HOM05D003103 ORTHO05D003999 4.6e-82 308.1 174 82.2
FAN28G1880 Fragaria x ananassa HOM05D003103 ORTHO05D003999 4.6e-82 308.1 174 82.2
Sc03g0001680 Simmondsia chinensis HOM05D003103 ORTHO05D003999 4.6e-82 308.1 187 77.5
arahy.Tifrunner.gnm1.ann1.WH2MYH Arachis hypogaea HOM05D003103 ORTHO05D003999 6.0e-82 307.8 187 78.6
HanXRQChr07g0187961 Helianthus annuus HOM05D003103 ORTHO05D003999 6.0e-82 307.8 185 80.0
TPR.G26868 Trifolium pratense HOM05D003103 ORTHO05D003999 6.0e-82 307.8 183 79.2
FAN23G0049 Fragaria x ananassa HOM05D003103 ORTHO05D003999 1.0e-81 307.0 174 81.6
MD02G1174500 Malus domestica HOM05D003103 ORTHO05D003999 1.0e-81 307.0 174 82.8
Gohir.A12G072300 Gossypium hirsutum HOM05D003103 ORTHO05D003999 1.7e-81 306.2 183 77.6
Lj4g0002336 Lotus japonicus HOM05D003103 ORTHO05D003999 1.7e-81 306.2 186 78.5
TPR.G19077 Trifolium pratense HOM05D003103 ORTHO05D003999 1.7e-81 306.2 187 77.5
Ca_22156_v3 Cicer arietinum L. HOM05D003103 ORTHO05D003999 2.3e-81 305.8 187 77.0
Lalb_Chr05g0226491 Lupinus albus HOM05D003103 ORTHO05D003999 3.0e-81 305.4 181 79.0
Medtr5g017050 Medicago truncatula HOM05D003103 ORTHO05D003999 3.9e-81 305.1 174 81.6
Psat2g166720 Pisum sativum HOM05D003103 ORTHO05D003999 3.9e-81 305.1 183 79.2
RcHm_v2.0_Chr2g0105921 Rosa chinensis HOM05D003103 ORTHO05D003999 3.9e-81 305.1 174 82.2
THA.LOC104819846 Tarenaya hassleriana HOM05D003103 ORTHO05D003999 3.9e-81 305.1 187 77.5
CDE08G1087 Ceratophyllum demersum HOM05D003103 ORTHO05D003999 6.6e-81 304.3 183 77.6
FAN20G1533 Fragaria x ananassa HOM05D003103 ORTHO05D003999 6.6e-81 304.3 174 81.6
Lsat_1_v5_gn_3_89301 Lactuca sativa HOM05D003103 ORTHO05D003999 6.6e-81 304.3 190 77.4
Hund13545 Selenicereus undatus HOM05D003103 ORTHO05D003999 6.6e-81 304.3 187 77.5
Glyma.01G187500 Glycine max HOM05D003103 ORTHO05D003999 8.6e-81 303.9 186 76.3
Psat4g086400 Pisum sativum HOM05D003103 ORTHO05D003999 8.6e-81 303.9 186 78.5
Ah.03g145520 Amaranthus hybridus HOM05D003103 ORTHO05D003999 1.9e-80 302.8 187 74.3
Ah.03g145530 Amaranthus hybridus HOM05D003103 ORTHO05D003999 1.9e-80 302.8 187 74.3
Lsat_1_v5_gn_2_84981 Lactuca sativa HOM05D003103 ORTHO05D003999 1.9e-80 302.8 196 76.0
VMungo1215G3025 Vigna mungo HOM05D003103 ORTHO05D003999 1.9e-80 302.8 181 78.5
Lalb_Chr09g0323251 Lupinus albus HOM05D003103 ORTHO05D003999 2.5e-80 302.4 183 77.0
Medtr4g094805 Medicago truncatula HOM05D003103 ORTHO05D003999 4.3e-80 301.6 181 78.5
Phvul.002G017800 Phaseolus vulgaris HOM05D003103 ORTHO05D003999 4.3e-80 301.6 181 77.9
Nn5g30339 Nelumbo nucifera HOM05D003103 ORTHO05D003999 1.6e-79 299.7 174 81.6
Aa31LG6G14040 Aethionema arabicum HOM05D003103 ORTHO05D003999 2.1e-79 299.3 187 77.0
ATR0584G122 Amborella trichopoda HOM05D003103 ORTHO05D003999 2.1e-79 299.3 181 77.3
PSO541G2306 Papaver somniferum HOM05D003103 ORTHO05D003999 2.1e-79 299.3 174 79.9
PSO675G0324 Papaver somniferum HOM05D003103 ORTHO05D003999 2.1e-79 299.3 174 79.9
Aqoxy6G01280 Aquilegia oxysepala HOM05D003103 ORTHO05D003999 2.8e-79 298.9 187 76.5
Thhalv10024704m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 2.8e-79 298.9 187 77.0
HanXRQChr14g0449051 Helianthus annuus HOM05D003103 ORTHO05D003999 2.8e-79 298.9 174 80.5
Hund16344 Selenicereus undatus HOM05D003103 ORTHO05D003999 3.6e-79 298.5 187 75.9
Cc07_g06120 Coffea canephora HOM05D003103 ORTHO05D003999 1.4e-78 296.6 167 82.6
AL7G13700 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 1.8e-78 296.2 187 75.4
AT2G23420 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 1.8e-78 296.2 187 76.5
Carub.0004s0262 Capsella rubella HOM05D003103 ORTHO05D003999 2.3e-78 295.8 187 77.0
Thhalv10000109m.g Eutrema salsugineum HOM05D003103 ORTHO05D003999 2.3e-78 295.8 187 77.5
Os04g0429800 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 2.3e-78 295.8 174 80.5
Zm00001eb422480 Zea mays HOM05D003103 ORTHO05D003999 2.3e-78 295.8 174 79.9
CARHR293030 Cardamine hirsuta HOM05D003103 ORTHO05D003999 3.1e-78 295.4 187 77.5
RcHm_v2.0_Chr7g0236011 Rosa chinensis HOM05D003103 ORTHO05D003999 3.1e-78 295.4 176 79.5
AL4G13330 Arabidopsis lyrata HOM05D003103 ORTHO05D003999 4.0e-78 295.0 188 76.1
CARHR245570 Cardamine hirsuta HOM05D003103 ORTHO05D003999 5.2e-78 294.7 187 75.4
Zm00001eb063870 Zea mays HOM05D003103 ORTHO05D003999 5.2e-78 294.7 178 77.5
EL10Ac6g15729 Beta vulgaris HOM05D003103 ORTHO05D003999 6.8e-78 294.3 187 72.7
AT4G36940 Arabidopsis thaliana HOM05D003103 ORTHO05D003999 1.2e-77 293.5 187 75.4
Carub.0007s0312 Capsella rubella HOM05D003103 ORTHO05D003999 2.6e-77 292.4 187 75.4
AUR62001914 Chenopodium quinoa HOM05D003103 ORTHO05D003999 2.6e-77 292.4 187 74.3
AUR62003895 Chenopodium quinoa HOM05D003103 ORTHO05D003999 2.6e-77 292.4 187 74.3
SEGI_29401 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 2.6e-77 292.4 171 78.9
Zm00001eb082880 Zea mays HOM05D003103 ORTHO05D003999 4.4e-77 291.6 174 78.2
Sp4g02410 Schrenkiella parvula HOM05D003103 ORTHO05D003999 5.8e-77 291.2 187 77.0
Sp7g34830 Schrenkiella parvula HOM05D003103 ORTHO05D003999 9.8e-77 290.4 174 78.2
A09p56930 Brassica napus HOM05D003103 ORTHO05D003999 1.3e-76 290.0 185 76.8
BraA09t41085Z Brassica rapa HOM05D003103 ORTHO05D003999 1.3e-76 290.0 185 76.8
BcaC07g40987 Brassica carinata HOM05D003103 ORTHO05D003999 2.2e-76 289.3 174 79.9
C08p39890 Brassica napus HOM05D003103 ORTHO05D003999 2.2e-76 289.3 174 79.9
BolC8t51562H Brassica oleracea HOM05D003103 ORTHO05D003999 2.2e-76 289.3 174 79.9
CSS0023497 Camellia sinensis var. sinensis HOM05D003103 ORTHO05D003999 2.2e-76 289.3 186 76.3
BcaNung05429 Brassica carinata HOM05D003103 ORTHO05D003999 1.4e-75 286.6 171 78.4
A03p64960 Brassica napus HOM05D003103 ORTHO05D003999 1.4e-75 286.6 171 78.4
BraA03t15555Z Brassica rapa HOM05D003103 ORTHO05D003999 1.4e-75 286.6 171 78.4
vmacro17957 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 1.9e-75 286.2 211 68.7
C07p62250 Brassica napus HOM05D003103 ORTHO05D003999 4.1e-75 285.0 171 78.4
BolC7t46641H Brassica oleracea HOM05D003103 ORTHO05D003999 4.1e-75 285.0 171 78.4
Aa31LG7G13580 Aethionema arabicum HOM05D003103 ORTHO05D003999 5.4e-75 284.6 172 79.1
Os03g0837300 Oryza sativa ssp. japonica HOM05D003103 ORTHO05D003999 9.2e-75 283.9 171 76.6
HPP92_009260 Vanilla planifolia HOM05D003103 ORTHO05D003999 1.2e-74 283.5 174 75.3
arahy.Tifrunner.gnm1.ann1.I75AMJ Arachis hypogaea HOM05D003103 ORTHO05D003999 3.0e-73 278.9 183 75.4
GSVIVG01022112001 Vitis vinifera HOM05D003103 ORTHO05D003999 3.3e-72 275.4 154 83.1
AagrBONN_evm.TU.Sc2ySwM_344.1320 Anthoceros agrestis HOM05D003103 ORTHO05D003999 1.2e-71 273.5 176 71.6
Pp3c24_5980 Physcomitrium patens HOM05D003103 ORTHO05D003999 1.5e-69 266.5 173 70.5
Mapoly0013s0004 Marchantia polymorpha HOM05D003103 ORTHO05D003999 5.8e-69 264.6 188 64.9
Mapoly0010s0215 Marchantia polymorpha HOM05D003103 ORTHO05D003999 9.9e-69 263.8 176 69.3
SMO358G0676 Selaginella moellendorffii HOM05D003103 ORTHO05D003999 2.4e-67 259.2 189 64.0
Nitab4.5_0003519g0020 Nicotiana tabacum HOM05D003103 ORTHO05D003999 7.8e-66 254.2 174 71.8
Actinidia03793 Actinidia chinensis HOM05D003103 ORTHO05D003999 2.6e-61 239.2 138 81.2
Nn1g04803 Nelumbo nucifera HOM05D003103 ORTHO05D003999 5.8e-61 238.0 139 79.9
PRCOL_00006024 Prasinoderma coloniale HOM05D003103 ORTHO05D003999 6.4e-60 234.6 180 62.2
RcHm_v2.0_Chr1g0342971 Rosa chinensis HOM05D003103 ORTHO05D003999 8.4e-60 234.2 176 67.6
SMO143G0022 Selaginella moellendorffii HOM05D003103 ORTHO05D003999 1.1e-59 233.8 174 63.8
arahy.Tifrunner.gnm1.ann1.Q9CK1R Arachis hypogaea HOM05D003103 ORTHO05D003999 1.6e-55 219.9 131 79.4
MCO01G563 Micromonas commoda HOM05D003103 ORTHO05D003999 1.1e-54 217.2 170 59.4
arahy.Tifrunner.gnm1.ann1.TC99UD Arachis hypogaea HOM05D003103 ORTHO05D003999 4.3e-48 195.3 183 57.9
Haze_26099 Corylus avellana HOM05D003103 ORTHO05D003999 4.8e-47 191.8 183 50.8
Glyma.11G054700 Glycine max HOM05D003103 ORTHO05D003999 7.1e-43 177.9 119 70.6
Haze_26163 Corylus avellana HOM05D003103 ORTHO05D003999 1.4e-35 153.7 146 48.6
SEGI_37916 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 1.3e-33 147.1 90 77.8
arahy.Tifrunner.gnm1.ann1.IQ50L9 Arachis hypogaea HOM05D003103 ORTHO05D003999 2.8e-31 139.4 79 84.8
arahy.Tifrunner.gnm1.ann1.K2RNYS Arachis hypogaea HOM05D003103 ORTHO05D003999 5.0e-28 128.6 77 84.4
CBR_g54878 Chara braunii HOM05D000019 ORTHO05D000048 3.0e-25 119.4 70 72.9
Glyma.17G172500 Glycine max HOM05D003103 ORTHO05D003999 5.0e-20 102.1 57 89.5
HPP92_025031 Vanilla planifolia HOM05D003103 ORTHO05D003999 5.1e-17 92.0 57 75.4
HanXRQChr16g0531001 Helianthus annuus HOM05D003103 ORTHO05D003999 1.4e-14 84.0 53 77.4
vmacro09123 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 2.4e-14 83.2 61 65.6
vmacro22986 Vaccinium macrocarpon HOM05D003103 ORTHO05D003999 2.4e-14 83.2 61 65.6
HPP92_025050 Vanilla planifolia HOM05D003103 ORTHO05D430557 2.0e-13 80.1 104 46.2
BolC4t23666H Brassica oleracea HOM05D003103 ORTHO05D107272 2.6e-13 79.7 146 37.7
SEGI_11101 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 3.8e-12 75.9 51 70.6
SEGI_12894 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 6.1e-10 68.6 33 87.9
BcaB07g33158 Brassica carinata HOM05D050361 ORTHO05D091671 3.3e-08 62.8 85 40.0
BcaB07g33436 Brassica carinata HOM05D003103 ORTHO05D090911 5.3e-06 55.5 69 42.0


User provided reference genes

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