Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 3.4e-305 1050.8 524 100.0
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 4.8e-182 641.7 610 59.0
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 5.7e-175 618.2 611 57.9
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 7.4e-175 617.8 630 56.0
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 9.1e-173 610.9 637 56.4
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 1.9e-170 603.2 610 57.2
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 5.2e-160 568.5 633 53.9
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 6.7e-160 568.2 609 54.0
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 1.2e-159 567.4 617 52.7
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 1.5e-159 567.0 617 52.7
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 3.7e-158 562.4 619 53.0
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 5.3e-157 558.5 620 50.8
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 1.0e-155 554.3 633 50.9
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 1.2e-153 547.4 618 52.3
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 3.6e-153 545.8 607 51.9
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 3.0e-152 542.7 685 48.9
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 4.0e-152 542.3 611 51.7
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 5.2e-152 542.0 509 57.2
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 6.8e-152 541.6 521 56.4
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 6.8e-152 541.6 509 58.2
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.8e-152 541.6 509 57.4
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 8.8e-152 541.2 633 50.7
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 8.8e-152 541.2 519 56.6
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 2.6e-151 539.7 605 51.2
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 3.4e-151 539.3 605 51.6
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 3.4e-151 539.3 622 51.3
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 4.4e-151 538.9 599 51.8
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 4.4e-151 538.9 566 53.5
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 9.8e-151 537.7 520 57.1
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 9.8e-151 537.7 599 52.1
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 3.7e-150 535.8 530 55.3
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 4.8e-150 535.4 421 64.8
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 8.3e-150 534.6 421 64.8
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 1.4e-149 533.9 421 64.8
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 2.4e-149 533.1 510 56.7
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 2.4e-149 533.1 416 65.1
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 3.1e-149 532.7 613 51.5
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 5.4e-149 531.9 524 56.1
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 5.4e-149 531.9 532 55.8
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 1.6e-148 530.4 512 56.2
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 2.0e-148 530.0 421 64.4
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 2.7e-148 529.6 600 50.8
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 4.5e-148 528.9 532 54.5
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 6.5e-147 525.0 509 56.0
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 8.6e-147 524.6 516 56.0
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 1.5e-146 523.9 500 57.0
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 2.5e-146 523.1 512 55.9
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 3.2e-146 522.7 602 49.0
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 7.2e-146 521.5 512 55.5
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 7.2e-146 521.5 422 63.3
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 1.6e-145 520.4 516 56.0
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 1.6e-145 520.4 492 55.9
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 2.8e-145 519.6 609 50.6
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 2.8e-145 519.6 600 50.0
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 6.1e-145 518.5 591 50.9
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 6.1e-145 518.5 529 54.3
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 8.0e-145 518.1 517 54.7
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 8.0e-145 518.1 422 63.0
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.4e-144 517.3 632 49.5
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 1.4e-144 517.3 614 51.0
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 1.4e-144 517.3 422 62.3
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.4e-144 517.3 587 51.4
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 2.3e-144 516.5 540 54.3
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 3.0e-144 516.2 519 54.9
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 6.8e-144 515.0 422 62.3
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.5e-143 513.8 512 54.9
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 2.0e-143 513.5 556 52.3
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 2.0e-143 513.5 592 49.2
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 2.6e-143 513.1 520 54.8
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 3.4e-143 512.7 523 54.7
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 4.4e-143 512.3 602 50.5
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 5.7e-143 511.9 422 61.8
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 1.3e-142 510.8 547 53.0
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 4.9e-142 508.8 375 69.6
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 4.9e-142 508.8 523 52.8
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 8.3e-142 508.1 424 62.0
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 1.1e-141 507.7 507 53.8
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 1.4e-141 507.3 601 48.1
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 1.4e-141 507.3 508 53.9
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 1.8e-141 506.9 461 58.6
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.8e-141 506.9 531 53.7
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 2.4e-141 506.5 674 46.3
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 3.1e-141 506.1 420 61.4
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 9.2e-141 504.6 508 53.9
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 1.2e-140 504.2 420 61.0
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.6e-140 503.8 564 50.7
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 2.0e-140 503.4 602 49.7
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 2.7e-140 503.1 612 47.2
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 2.7e-140 503.1 547 52.3
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 3.5e-140 502.7 541 52.9
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 4.5e-140 502.3 556 53.1
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 7.8e-140 501.5 506 54.7
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 1.0e-139 501.1 614 46.9
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 1.0e-139 501.1 523 52.0
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 1.3e-139 500.7 630 47.0
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 3.8e-139 499.2 531 52.0
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 3.8e-139 499.2 626 46.5
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 5.0e-139 498.8 512 53.3
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 5.0e-139 498.8 503 53.5
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 5.0e-139 498.8 586 48.3
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 8.6e-139 498.0 625 46.4
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 1.9e-138 496.9 632 46.5
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 5.6e-138 495.4 522 52.1
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 7.3e-138 495.0 511 53.4
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 9.5e-138 494.6 585 48.5
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 2.1e-137 493.4 492 53.9
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 2.1e-137 493.4 616 47.7
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 4.7e-137 492.3 571 49.0
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 4.0e-136 489.2 637 46.8
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 4.0e-136 489.2 345 71.6
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 1.5e-135 487.3 542 50.2
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 7.5e-135 485.0 593 47.7
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 9.8e-135 484.6 561 49.4
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 1.7e-134 483.8 544 49.8
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 2.2e-134 483.4 502 52.2
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 2.2e-134 483.4 400 61.5
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 8.3e-134 481.5 414 59.9
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 2.4e-133 479.9 574 51.2
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 9.2e-133 478.0 527 49.7
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 2.7e-132 476.5 565 51.2
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 1.0e-131 474.6 560 50.7
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 2.3e-131 473.4 504 52.4
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 3.0e-131 473.0 525 52.6
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 1.6e-124 450.7 379 60.7
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 1.6e-124 450.7 445 56.0
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.3e-123 447.6 422 53.8
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 3.3e-122 443.0 414 56.8
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 4.1e-117 426.0 577 48.2
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.1e-116 423.7 607 46.1
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 3.3e-114 416.4 598 42.5
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 3.3e-114 416.4 491 48.9
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 5.2e-112 409.1 385 56.6
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.4e-109 401.0 442 51.1
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 1.9e-109 400.6 572 44.6
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 5.4e-109 399.1 422 52.6
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 9.2e-109 398.3 372 57.5
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 7.6e-103 378.6 538 40.7
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.2e-100 371.3 342 58.5
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.2e-100 371.3 581 44.4
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 1.3e-99 367.9 365 54.8
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 9.6e-98 361.7 506 43.5
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 4.8e-97 359.4 506 40.3
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.4e-96 357.8 510 44.7
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.7e-94 350.9 331 57.4
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 2.9e-94 350.1 233 72.1
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.6e-89 334.3 234 67.9
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 4.9e-86 322.8 524 39.9
CDE02G0373 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.6e-84 317.8 221 67.4
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 2.5e-82 310.5 328 50.0
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 5.5e-77 292.7 460 41.7
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 4.8e-65 253.1 390 45.1
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 9.1e-64 248.8 330 50.3
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 9.4e-53 212.2 246 51.6
SHI09320 Sapria himalayana HOM05D003665 ORTHO05D004387 9.4e-53 212.2 188 56.9
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 6.3e-49 199.5 312 44.2
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 2.4e-48 197.6 159 62.3
TPR.G35439 Trifolium pratense HOM05D003665 ORTHO05D004387 2.0e-42 177.9 142 64.8
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 9.1e-40 169.1 118 67.8
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 6.5e-38 162.9 182 53.3
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 2.8e-33 147.5 171 50.9
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 3.7e-33 147.1 113 62.8
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 6.3e-33 146.4 151 49.0
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 2.0e-31 141.4 142 49.3
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 4.5e-31 140.2 78 84.6
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 2.6e-26 124.4 99 62.6
TPR.G15544 Trifolium pratense HOM05D003665 ORTHO05D004387 1.1e-24 119.0 63 79.4
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 4.5e-23 113.6 152 49.3
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 1.0e-22 112.5 578 21.5
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 3.3e-21 107.5 245 29.8
SHI09316 Sapria himalayana HOM05D003665 ORTHO05D004387 1.2e-18 99.0 63 68.3
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 1.7e-14 85.1 49 77.6
BolC4t27275H Brassica oleracea HOM05D003665 ORTHO05D004387 3.3e-13 80.9 127 37.8
Ca_23093_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.4e-11 75.5 38 94.7
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 7.5e-10 69.7 232 26.3
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 1.1e-08 65.9 37 83.8
BraA04t17717Z Brassica rapa HOM05D003665 ORTHO05D040370 1.2e-07 62.4 64 50.0
C04p57550 Brassica napus HOM05D003665 ORTHO05D040370 2.7e-07 61.2 41 63.4
Oeu002465.1 Olea europaea HOM05D003665 ORTHO05D289337 3.0e-06 57.8 178 30.9
VMungo1074G0001 Vigna mungo HOM05D003665 ORTHO05D004387 3.0e-06 57.8 35 68.6


User provided reference genes

Program Settings