Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_899.g14851 Utricularia gibba HOM05D005586 ORTHO05D007044 1.9e-133 479.2 243 100.0
MSTRG.6212 Avicennia marina HOM05D005586 ORTHO05D007044 1.0e-102 377.1 243 77.4
Migut.J01477 Erythranthe guttata HOM05D005586 ORTHO05D007044 3.0e-102 375.6 243 77.0
Oeu009835.1 Olea europaea HOM05D005586 ORTHO05D007044 4.3e-101 371.7 243 77.0
Solyc10g078790.1 Solanum lycopersicum HOM05D005586 ORTHO05D007044 4.4e-98 361.7 243 72.4
Sopen10g029410 Solanum pennellii HOM05D005586 ORTHO05D007044 1.3e-97 360.1 243 72.0
Nitab4.5_0000730g0080 Nicotiana tabacum HOM05D005586 ORTHO05D007044 2.2e-97 359.4 243 72.4
PGSC0003DMG400011415 Solanum tuberosum HOM05D005586 ORTHO05D007044 6.4e-97 357.8 243 71.6
Cc06_g13260 Coffea canephora HOM05D005586 ORTHO05D007044 1.4e-96 356.7 243 72.4
Oeu025223.1 Olea europaea HOM05D005586 ORTHO05D007044 1.6e-95 353.2 240 73.8
Peaxi162Scf00231g00064 Petunia axillaris HOM05D005586 ORTHO05D007044 1.6e-95 353.2 243 71.6
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 2.7e-95 352.4 242 72.7
SGA_v2.0_scaffold17G07909 Striga asiatica HOM05D005586 ORTHO05D007044 6.0e-95 351.3 234 73.9
CAN.G1161.32 Capsicum annuum HOM05D005586 ORTHO05D007044 1.0e-94 350.5 243 71.2
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 2.3e-94 349.4 243 71.2
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 1.9e-93 346.3 243 72.0
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 3.3e-93 345.5 243 69.5
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 5.6e-93 344.7 242 69.4
SalBow6G0691 Salvia bowleyana HOM05D005586 ORTHO05D007044 9.6e-93 344.0 243 69.1
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 1.3e-92 343.6 243 67.9
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 1.3e-92 343.6 242 70.7
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 2.1e-92 342.8 243 69.1
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 2.8e-92 342.4 243 69.1
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 2.8e-92 342.4 244 69.7
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 3.6e-92 342.0 243 70.0
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 3.6e-92 342.0 243 70.8
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 6.2e-92 341.3 243 68.3
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 8.1e-92 340.9 243 68.3
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 8.1e-92 340.9 243 70.4
Lj7P472T26 Lonicera japonica HOM05D005586 ORTHO05D007044 8.1e-92 340.9 243 68.3
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 1.1e-91 340.5 243 68.3
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 1.1e-91 340.5 243 69.1
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 1.1e-91 340.5 243 69.1
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 1.4e-91 340.1 243 68.3
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 1.4e-91 340.1 243 69.5
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 3.1e-91 339.0 243 69.5
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 3.1e-91 339.0 243 67.9
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 3.1e-91 339.0 243 67.9
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 3.1e-91 339.0 243 69.5
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 3.1e-91 339.0 243 68.3
Nitab4.5_0004134g0010 Nicotiana tabacum HOM05D005586 ORTHO05D007044 3.1e-91 339.0 232 72.8
Rhsim07G0149700 Rhododendron simsii HOM05D005586 ORTHO05D007044 4.0e-91 338.6 236 69.9
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 5.3e-91 338.2 243 68.3
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 5.3e-91 338.2 243 68.7
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 6.9e-91 337.8 243 68.3
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 9.0e-91 337.4 243 67.5
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 9.0e-91 337.4 232 72.8
Nitab4.5_0000455g0040 Nicotiana tabacum HOM05D005586 ORTHO05D007044 1.2e-90 337.0 232 72.4
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 1.5e-90 336.7 243 67.1
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 1.5e-90 336.7 243 67.9
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 1.5e-90 336.7 243 67.1
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 2.0e-90 336.3 243 66.7
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 3.4e-90 335.5 243 68.3
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 3.4e-90 335.5 243 68.3
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 3.4e-90 335.5 243 68.3
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 4.5e-90 335.1 243 66.7
CSS0030464 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 4.5e-90 335.1 233 72.1
Aa31LG3G220 Aethionema arabicum HOM05D005586 ORTHO05D007044 5.8e-90 334.7 243 67.5
AUR62021301 Chenopodium quinoa HOM05D005586 ORTHO05D007044 5.8e-90 334.7 243 67.5
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 5.8e-90 334.7 243 67.9
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 7.6e-90 334.3 243 67.5
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 7.6e-90 334.3 243 67.5
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 9.9e-90 334.0 243 66.3
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 9.9e-90 334.0 243 68.3
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 1.3e-89 333.6 243 68.7
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 2.2e-89 332.8 243 66.7
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 2.2e-89 332.8 243 67.9
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 2.2e-89 332.8 243 67.9
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 2.2e-89 332.8 244 66.8
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 2.2e-89 332.8 243 67.5
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 2.2e-89 332.8 243 66.7
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 2.2e-89 332.8 243 67.1
AUR62033219 Chenopodium quinoa HOM05D005586 ORTHO05D007044 3.8e-89 332.0 243 66.7
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 4.9e-89 331.6 243 67.5
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 8.4e-89 330.9 243 67.1
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 8.4e-89 330.9 243 66.7
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 1.1e-88 330.5 242 66.9
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 2.4e-88 329.3 242 66.5
ECA234G4574 Erigeron canadensis HOM05D005586 ORTHO05D007044 3.2e-88 328.9 243 67.9
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 1.6e-87 326.6 243 65.8
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 1.6e-87 326.6 244 67.2
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 2.7e-87 325.9 243 65.8
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 2.7e-87 325.9 243 67.5
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 4.6e-87 325.1 243 65.8
RcHm_v2.0_Chr4g0402481 Rosa chinensis HOM05D005586 ORTHO05D007044 4.6e-87 325.1 242 64.9
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 4.6e-87 325.1 243 65.4
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 6.0e-87 324.7 233 70.0
FvH4_5g27790 Fragaria vesca HOM05D005586 ORTHO05D007044 6.0e-87 324.7 243 65.4
FAN08G2362 Fragaria x ananassa HOM05D005586 ORTHO05D007044 6.0e-87 324.7 243 65.4
FAN18G4074 Fragaria x ananassa HOM05D005586 ORTHO05D007044 6.0e-87 324.7 243 65.4
Phvul.003G146100 Phaseolus vulgaris HOM05D005586 ORTHO05D007044 5.1e-86 321.6 243 65.8
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 1.5e-85 320.1 243 66.7
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 5.6e-85 318.2 241 65.6
MBI14_g17367_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 7.4e-85 317.8 241 62.7
PSO541G5977 Papaver somniferum HOM05D005586 ORTHO05D007044 7.4e-85 317.8 243 64.6
MD13G1254800 Malus domestica HOM05D005586 ORTHO05D007044 9.6e-85 317.4 233 67.0
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 1.6e-84 316.6 243 64.2
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 2.1e-84 316.2 217 72.4
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 8.1e-84 314.3 243 63.4
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 8.1e-84 314.3 223 72.6
VMungo1215G0758 Vigna mungo HOM05D005586 ORTHO05D007044 1.1e-83 313.9 229 69.0
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 1.4e-83 313.5 233 67.8
CSS0000496 Camellia sinensis var. sinensis HOM05D005586 ORTHO05D007044 2.4e-83 312.8 233 69.1
Lsat_1_v5_gn_5_84680 Lactuca sativa HOM05D005586 ORTHO05D007044 6.9e-83 311.2 246 63.0
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 2.5e-80 302.8 243 65.4
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 2.1e-79 299.7 223 67.3
Os08g0243900 Oryza sativa ssp. japonica HOM05D005586 ORTHO05D007044 1.1e-75 287.3 241 58.1
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 1.1e-75 287.3 245 58.4
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 2.4e-75 286.2 237 64.6
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 1.7e-73 280.0 229 63.3
Zm00001eb414690 Zea mays HOM05D005586 ORTHO05D007044 4.9e-73 278.5 241 56.8
ATR0618G120 Amborella trichopoda HOM05D005586 ORTHO05D007044 4.3e-69 265.4 241 54.8
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.6e-68 263.5 243 57.6
COL.COLO4_04392 Corchorus olitorius HOM05D005586 ORTHO05D007044 2.2e-65 253.1 243 56.8
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 3.8e-65 252.3 221 58.8
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 3.6e-63 245.7 222 58.1
BcaC01g06494 Brassica carinata HOM05D005586 ORTHO05D007044 3.6e-63 245.7 222 58.1
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 1.4e-62 243.8 246 49.6
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 1.5e-53 213.8 140 76.4
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 1.8e-51 206.8 161 64.6
MD13G1254300 Malus domestica HOM05D005586 ORTHO05D007044 4.1e-51 205.7 174 62.1
Mapoly0111s0055 Marchantia polymorpha HOM05D005586 ORTHO05D007044 3.8e-49 199.1 251 42.2
HPP92_000781 Vanilla planifolia HOM05D005586 ORTHO05D007044 1.6e-47 193.7 159 61.6
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.2e-44 183.3 229 45.9
Actinidia15717 Actinidia chinensis HOM05D005586 ORTHO05D007044 1.9e-40 170.2 223 45.3
Pp3c25_4850 Physcomitrium patens HOM05D005586 ORTHO05D007044 3.4e-37 159.5 245 36.3
CBR_g26159 Chara braunii HOM05D005586 ORTHO05D000002 1.7e-33 147.1 242 36.8
AagrBONN_evm.TU.Sc2ySwM_368.670 Anthoceros agrestis HOM05D005586 ORTHO05D007044 1.9e-32 143.7 206 39.3
MD16G1258000 Malus domestica HOM05D005586 ORTHO05D007044 3.2e-32 142.9 123 58.5
MBI16_g35933_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009834 6.6e-09 65.5 44 72.7
Oeu013635.1 Olea europaea HOM05D006172 ORTHO05D005515 6.8e-06 55.5 48 60.4


User provided reference genes

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